Cow genome map
| Conread name: | Ss1.1-rjej03b_m20.5 |
| Conread position: | 1-836 |
| Cow position: | chr2:82799722-82800551 (view UCSC Genome Browser custom track) |
| Alignm length: | 840 |
| Alignm identity: | 543 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 504, 514 |
| Conread position: | 1-902 |
| Cow position: | chr2:78755029-78755925 (view UCSC Genome Browser custom track) |
| Alignm length: | 905 |
| Alignm identity: | 585 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 6 |
| Conread position: | 1-904 |
| Cow position: | chr2:82799470-82800373 (view UCSC Genome Browser custom track) |
| Alignm length: | 907 |
| Alignm identity: | 609 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 178 |
| Conread position: | 1-907 |
| Cow position: | chr2:78754291-78755178 (view UCSC Genome Browser custom track) |
| Alignm length: | 911 |
| Alignm identity: | 588 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 19 |
| Conread position: | 1-907 |
| Cow position: | chr2:78755280-78756183 (view UCSC Genome Browser custom track) |
| Alignm length: | 910 |
| Alignm identity: | 585 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 532, 58 |
| Conread position: | 1-911 |
| Cow position: | chr2:86465378-86466287 (view UCSC Genome Browser custom track) |
| Alignm length: | 917 |
| Alignm identity: | 565 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 195 |
| Conread position: | 9-904 |
| Cow position: | chr2:5875062-5874167 (view UCSC Genome Browser custom track) |
| Alignm length: | 906 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 156 |
| Conread position: | 14-264 |
| Cow position: | chr2:48689333-48689083 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 76, 81 |
| Conread position: | 14-904 |
| Cow position: | chr2:5875141-5874251 (view UCSC Genome Browser custom track) |
| Alignm length: | 900 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 36 |
| Conread position: | 16-865 |
| Cow position: | chr2:86464972-86465822 (view UCSC Genome Browser custom track) |
| Alignm length: | 855 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 193 |
| Conread position: | 19-851 |
| Cow position: | chr2:86465060-86465892 (view UCSC Genome Browser custom track) |
| Alignm length: | 836 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 153 |
| Conread position: | 19-895 |
| Cow position: | chr2:82799572-82800448 (view UCSC Genome Browser custom track) |
| Alignm length: | 882 |
| Alignm identity: | 590 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 85 |
| Conread position: | 22-907 |
| Cow position: | chr2:78754725-78755596 (view UCSC Genome Browser custom track) |
| Alignm length: | 890 |
| Alignm identity: | 594 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 93 |
| Conread position: | 22-907 |
| Cow position: | chr2:78754881-78755762 (view UCSC Genome Browser custom track) |
| Alignm length: | 891 |
| Alignm identity: | 598 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 29 |
| Conread position: | 28-902 |
| Cow position: | chr2:78755557-78756426 (view UCSC Genome Browser custom track) |
| Alignm length: | 882 |
| Alignm identity: | 570 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 72 |
| Conread position: | 28-907 |
| Cow position: | chr2:78755390-78756267 (view UCSC Genome Browser custom track) |
| Alignm length: | 887 |
| Alignm identity: | 572 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 124 |
| Conread position: | 36-854 |
| Cow position: | chr2:78754811-78755627 (view UCSC Genome Browser custom track) |
| Alignm length: | 820 |
| Alignm identity: | 552 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 311, 327 |
| Conread position: | 39-357 |
| Cow position: | chr2:48689392-48689074 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 130, 139 |
| Conread position: | 57-568 |
| Cow position: | chr2:48689541-48689031 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 308 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 398, 147 |
| Conread position: | 58-902 |
| Cow position: | chr2:78754263-78755089 (view UCSC Genome Browser custom track) |
| Alignm length: | 850 |
| Alignm identity: | 543 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 121 |
| Conread position: | 61-902 |
| Cow position: | chr2:78754101-78754921 (view UCSC Genome Browser custom track) |
| Alignm length: | 846 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 60 |
| Conread position: | 68-907 |
| Cow position: | chr2:82799453-82800292 (view UCSC Genome Browser custom track) |
| Alignm length: | 844 |
| Alignm identity: | 558 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 288 |
| Conread position: | 78-842 |
| Cow position: | chr2:5875161-5874397 (view UCSC Genome Browser custom track) |
| Alignm length: | 772 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 194 |
| Conread position: | 141-622 |
| Cow position: | chr2:48689541-48689061 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 295 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 37, 31 |
| Conread position: | 143-904 |
| Cow position: | chr2:5875180-5874419 (view UCSC Genome Browser custom track) |
| Alignm length: | 772 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 53 |
| Conread position: | 217-845 |
| Cow position: | chr2:86465006-86465634 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 241, 220 |
| Conread position: | 278-902 |
| Cow position: | chr2:86464983-86465609 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 379 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 157, 187 |
| Conread position: | 294-904 |
| Cow position: | chr2:86465167-86465777 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 102 |
| Conread position: | 385-907 |
| Cow position: | chr2:86465006-86465528 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 93 |
| Conread position: | 393-862 |
| Cow position: | chr2:48689541-48689073 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 296 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 119, 141 |
| Conread position: | 396-907 |
| Cow position: | chr2:78754100-78754606 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 315 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 47, 40 |
| Conread position: | 409-915 |
| Cow position: | chr2:5875166-5874661 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 311 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 99, 110 |
| Conread position: | 443-901 |
| Cow position: | chr2:86464980-86465438 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 281 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 148, 154 |
| Conread position: | 478-911 |
| Cow position: | chr2:48689540-48689107 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 127 |
| Conread position: | 479-907 |
| Cow position: | chr2:5875180-5874752 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 256 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 236, 220 |
| Conread position: | 573-909 |
| Cow position: | chr2:82799366-82799705 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 9, 62 |
Show alignments to all cow chromosomes.