Cow genome map
| Conread name: | Ss1.1-rjej03b_m20.5 |
| Conread position: | 1-228 |
| Cow position: | chr25:33127997-33128224 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-389 |
| Cow position: | chr25:33127830-33128217 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 1-431 |
| Cow position: | chr25:34714061-34714490 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 351, 362 |
| Conread position: | 1-432 |
| Cow position: | chr25:25652887-25653318 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 268 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 19, 11 |
| Conread position: | 1-480 |
| Cow position: | chr25:33144960-33145436 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 258, 77 |
| Conread position: | 1-519 |
| Cow position: | chr25:33144876-33145391 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 136 |
| Conread position: | 1-524 |
| Cow position: | chr25:25652719-25653242 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 318 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 90, 96 |
| Conread position: | 1-589 |
| Cow position: | chr25:33157362-33156775 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 568, 0 |
| Conread position: | 1-736 |
| Cow position: | chr25:326524-327265 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 107 |
| Conread position: | 1-758 |
| Cow position: | chr25:34732581-34731824 (view UCSC Genome Browser custom track) |
| Alignm length: | 763 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 260, 276 |
| Conread position: | 1-896 |
| Cow position: | chr25:34447049-34447933 (view UCSC Genome Browser custom track) |
| Alignm length: | 897 |
| Alignm identity: | 591 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 547, 552 |
| Conread position: | 1-902 |
| Cow position: | chr25:33298759-33299659 (view UCSC Genome Browser custom track) |
| Alignm length: | 904 |
| Alignm identity: | 594 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 456, 6 |
| Conread position: | 1-902 |
| Cow position: | chr25:33298926-33299827 (view UCSC Genome Browser custom track) |
| Alignm length: | 907 |
| Alignm identity: | 582 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 107 |
| Conread position: | 1-902 |
| Cow position: | chr25:36801079-36801967 (view UCSC Genome Browser custom track) |
| Alignm length: | 904 |
| Alignm identity: | 582 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 7 |
| Conread position: | 1-903 |
| Cow position: | chr25:34770097-34769195 (view UCSC Genome Browser custom track) |
| Alignm length: | 903 |
| Alignm identity: | 611 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-904 |
| Cow position: | chr25:33298842-33299745 (view UCSC Genome Browser custom track) |
| Alignm length: | 906 |
| Alignm identity: | 588 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 171 |
| Conread position: | 1-907 |
| Cow position: | chr25:25652215-25653121 (view UCSC Genome Browser custom track) |
| Alignm length: | 914 |
| Alignm identity: | 559 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 96 |
| Conread position: | 1-907 |
| Cow position: | chr25:25652299-25653205 (view UCSC Genome Browser custom track) |
| Alignm length: | 914 |
| Alignm identity: | 556 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 11 |
| Conread position: | 1-907 |
| Cow position: | chr25:36800911-36801804 (view UCSC Genome Browser custom track) |
| Alignm length: | 909 |
| Alignm identity: | 585 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 371, 6 |
| Conread position: | 1-912 |
| Cow position: | chr25:36800658-36801557 (view UCSC Genome Browser custom track) |
| Alignm length: | 916 |
| Alignm identity: | 582 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 195 |
| Conread position: | 2-388 |
| Cow position: | chr25:34714145-34714532 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 250 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 9, 107 |
| Conread position: | 2-907 |
| Cow position: | chr25:33298506-33299412 (view UCSC Genome Browser custom track) |
| Alignm length: | 911 |
| Alignm identity: | 589 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 53 |
| Conread position: | 3-263 |
| Cow position: | chr25:23420581-23420840 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 3-325 |
| Cow position: | chr25:33127916-33128237 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 217 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 4-554 |
| Cow position: | chr25:23420329-23420879 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-852 |
| Cow position: | chr25:25652470-25653318 (view UCSC Genome Browser custom track) |
| Alignm length: | 858 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 42 |
| Conread position: | 14-749 |
| Cow position: | chr25:34433729-34434451 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 456 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 79, 71 |
| Conread position: | 15-473 |
| Cow position: | chr25:33305278-33304829 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 296 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 234, 155 |
| Conread position: | 15-903 |
| Cow position: | chr25:36800588-36801464 (view UCSC Genome Browser custom track) |
| Alignm length: | 892 |
| Alignm identity: | 575 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 195 |
| Conread position: | 18-387 |
| Cow position: | chr25:346492-346861 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 73, 85 |
| Conread position: | 19-763 |
| Cow position: | chr25:33157512-33156767 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 32 |
| Conread position: | 19-907 |
| Cow position: | chr25:25652401-25653289 (view UCSC Genome Browser custom track) |
| Alignm length: | 895 |
| Alignm identity: | 560 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 439, 426 |
| Conread position: | 20-556 |
| Cow position: | chr25:34763208-34763741 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 330 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 154, 158 |
| Conread position: | 21-905 |
| Cow position: | chr25:326376-327266 (view UCSC Genome Browser custom track) |
| Alignm length: | 898 |
| Alignm identity: | 549 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 79 |
| Conread position: | 22-516 |
| Cow position: | chr25:33305354-33304866 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 37 |
| Conread position: | 22-882 |
| Cow position: | chr25:34433572-34434415 (view UCSC Genome Browser custom track) |
| Alignm length: | 871 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 35 |
| Conread position: | 22-892 |
| Cow position: | chr25:34762877-34763741 (view UCSC Genome Browser custom track) |
| Alignm length: | 875 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 156 |
| Conread position: | 22-907 |
| Cow position: | chr25:33298611-33299496 (view UCSC Genome Browser custom track) |
| Alignm length: | 888 |
| Alignm identity: | 569 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 29 |
| Conread position: | 26-517 |
| Cow position: | chr25:18642203-18641700 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 319 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 137, 177 |
| Conread position: | 26-722 |
| Cow position: | chr25:23420198-23420879 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 77 |
| Conread position: | 26-846 |
| Cow position: | chr25:33306246-33305433 (view UCSC Genome Browser custom track) |
| Alignm length: | 831 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 58 |
| Conread position: | 28-480 |
| Cow position: | chr25:33127772-33128224 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 28-902 |
| Cow position: | chr25:33298701-33299575 (view UCSC Genome Browser custom track) |
| Alignm length: | 878 |
| Alignm identity: | 592 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 85 |
| Conread position: | 28-902 |
| Cow position: | chr25:34446992-34447857 (view UCSC Genome Browser custom track) |
| Alignm length: | 876 |
| Alignm identity: | 609 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 512, 502 |
| Conread position: | 29-852 |
| Cow position: | chr25:33306326-33305512 (view UCSC Genome Browser custom track) |
| Alignm length: | 832 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 255, 37 |
| Conread position: | 31-907 |
| Cow position: | chr25:34770151-34769275 (view UCSC Genome Browser custom track) |
| Alignm length: | 880 |
| Alignm identity: | 615 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 68 |
| Conread position: | 31-912 |
| Cow position: | chr25:34433497-34434360 (view UCSC Genome Browser custom track) |
| Alignm length: | 889 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 495, 108 |
| Conread position: | 37-357 |
| Cow position: | chr25:22235976-22236296 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 132, 141 |
| Conread position: | 37-904 |
| Cow position: | chr25:36801030-36801885 (view UCSC Genome Browser custom track) |
| Alignm length: | 873 |
| Alignm identity: | 563 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 135 |
| Conread position: | 40-820 |
| Cow position: | chr25:326479-327265 (view UCSC Genome Browser custom track) |
| Alignm length: | 790 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 397, 464 |
| Conread position: | 42-841 |
| Cow position: | chr25:33157571-33156775 (view UCSC Genome Browser custom track) |
| Alignm length: | 802 |
| Alignm identity: | 557 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 28 |
| Conread position: | 48-907 |
| Cow position: | chr25:33298469-33299328 (view UCSC Genome Browser custom track) |
| Alignm length: | 863 |
| Alignm identity: | 563 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 89 |
| Conread position: | 55-648 |
| Cow position: | chr25:33144846-33145436 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 117 |
| Conread position: | 55-678 |
| Cow position: | chr25:36801372-36801991 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 117 |
| Conread position: | 55-846 |
| Cow position: | chr25:36800544-36801335 (view UCSC Genome Browser custom track) |
| Alignm length: | 796 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 141 |
| Conread position: | 55-901 |
| Cow position: | chr25:34732611-34731764 (view UCSC Genome Browser custom track) |
| Alignm length: | 851 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 43 |
| Conread position: | 57-568 |
| Cow position: | chr25:22235828-22236339 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 311 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 316, 302 |
| Conread position: | 58-242 |
| Cow position: | chr25:34433020-34433204 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 124, 112 |
| Conread position: | 58-352 |
| Cow position: | chr25:366725-367019 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 102, 106 |
| Conread position: | 58-902 |
| Cow position: | chr25:34446938-34447775 (view UCSC Genome Browser custom track) |
| Alignm length: | 846 |
| Alignm identity: | 558 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 140 |
| Conread position: | 58-907 |
| Cow position: | chr25:25652188-25653037 (view UCSC Genome Browser custom track) |
| Alignm length: | 857 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 39 |
| Conread position: | 58-920 |
| Cow position: | chr25:34762829-34763684 (view UCSC Genome Browser custom track) |
| Alignm length: | 868 |
| Alignm identity: | 541 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 39 |
| Conread position: | 61-559 |
| Cow position: | chr25:34714037-34714535 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 61-785 |
| Cow position: | chr25:34713869-34714589 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 39 |
| Conread position: | 64-447 |
| Cow position: | chr25:346454-346835 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 113, 106 |
| Conread position: | 72-557 |
| Cow position: | chr25:33127732-33128217 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 74-857 |
| Cow position: | chr25:34432952-34433732 (view UCSC Genome Browser custom track) |
| Alignm length: | 807 |
| Alignm identity: | 497 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 13, 20 |
| Conread position: | 76-679 |
| Cow position: | chr25:23420317-23420923 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 193 |
| Conread position: | 78-631 |
| Cow position: | chr25:34473527-34474077 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 315 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 335, 0 |
| Conread position: | 78-902 |
| Cow position: | chr25:34446874-34447698 (view UCSC Genome Browser custom track) |
| Alignm length: | 827 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 58 |
| Conread position: | 82-902 |
| Cow position: | chr25:326353-327179 (view UCSC Genome Browser custom track) |
| Alignm length: | 834 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 81 |
| Conread position: | 88-767 |
| Cow position: | chr25:34713812-34714491 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 27 |
| Conread position: | 88-902 |
| Cow position: | chr25:34433239-34434026 (view UCSC Genome Browser custom track) |
| Alignm length: | 815 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 104-601 |
| Cow position: | chr25:18642209-18641700 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 315 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 115, 103 |
| Conread position: | 116-857 |
| Cow position: | chr25:34433498-34434221 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 107 |
| Conread position: | 121-403 |
| Cow position: | chr25:326986-327268 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 136-907 |
| Cow position: | chr25:34732614-34731843 (view UCSC Genome Browser custom track) |
| Alignm length: | 780 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 36 |
| Conread position: | 141-590 |
| Cow position: | chr25:22235828-22236277 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 281 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 37, 31 |
| Conread position: | 144-662 |
| Cow position: | chr25:34473509-34474024 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 308 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 115, 134 |
| Conread position: | 163-648 |
| Cow position: | chr25:33127739-33128224 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 166-739 |
| Cow position: | chr25:33127659-33128231 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 11 |
| Conread position: | 204-904 |
| Cow position: | chr25:33157495-33156795 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 64 |
| Conread position: | 214-766 |
| Cow position: | chr25:414875-414326 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 332 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 23, 123 |
| Conread position: | 215-555 |
| Cow position: | chr25:346521-346861 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 44, 51 |
| Conread position: | 218-766 |
| Cow position: | chr25:33305410-33304867 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 367, 89 |
| Conread position: | 219-878 |
| Cow position: | chr25:34732615-34731956 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 49 |
| Conread position: | 219-907 |
| Cow position: | chr25:33157564-33156876 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 53 |
| Conread position: | 223-816 |
| Cow position: | chr25:33144846-33145436 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 166 |
| Conread position: | 224-890 |
| Cow position: | chr25:23420228-23420879 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 45 |
| Conread position: | 225-549 |
| Cow position: | chr25:366724-367048 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 161, 151 |
| Conread position: | 225-639 |
| Cow position: | chr25:346447-346861 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 161, 151 |
| Conread position: | 227-893 |
| Cow position: | chr25:3663932-3664598 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 392 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 63, 53 |
| Conread position: | 229-892 |
| Cow position: | chr25:34713869-34714532 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 150 |
| Conread position: | 237-901 |
| Cow position: | chr25:34713793-34714457 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 47 |
| Conread position: | 276-765 |
| Cow position: | chr25:18642205-18641704 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 316 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 139, 398 |
| Conread position: | 277-722 |
| Cow position: | chr25:346412-346860 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 284 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 35, 192 |
| Conread position: | 278-902 |
| Cow position: | chr25:23420198-23420807 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 587, 91 |
| Conread position: | 281-821 |
| Cow position: | chr25:34433495-34434029 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 332 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 281-907 |
| Cow position: | chr25:36800518-36801144 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 85 |
| Conread position: | 284-907 |
| Cow position: | chr25:34762803-34763423 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 373 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 487, 318 |
| Conread position: | 307-900 |
| Cow position: | chr25:33144846-33145436 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 138 |
| Conread position: | 309-818 |
| Cow position: | chr25:22235828-22236337 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 136 |
| Conread position: | 310-634 |
| Cow position: | chr25:366725-367049 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 102, 107 |
| Conread position: | 312-882 |
| Cow position: | chr25:34473509-34474076 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 331 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 146, 139 |
| Conread position: | 324-686 |
| Cow position: | chr25:34733995-34733633 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 50, 32 |
| Conread position: | 325-829 |
| Cow position: | chr25:33127733-33128237 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 326-902 |
| Cow position: | chr25:34713714-34714290 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 46 |
| Conread position: | 373-904 |
| Cow position: | chr25:33305421-33304897 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 380, 17 |
| Conread position: | 385-907 |
| Cow position: | chr25:23420055-23420560 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 332 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 127, 21 |
| Conread position: | 391-907 |
| Cow position: | chr25:33144846-33145359 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 166 |
| Conread position: | 393-863 |
| Cow position: | chr25:22235828-22236298 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 142 |
| Conread position: | 394-723 |
| Cow position: | chr25:366725-367054 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 219 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 18, 22 |
| Conread position: | 394-740 |
| Cow position: | chr25:346448-346794 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 226 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 396-853 |
| Cow position: | chr25:414773-414324 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 281 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 11, 23 |
| Conread position: | 397-904 |
| Cow position: | chr25:34473510-34474014 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 296 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 58, 48 |
| Conread position: | 404-910 |
| Cow position: | chr25:33127728-33128234 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 498, 503 |
| Conread position: | 455-912 |
| Cow position: | chr25:34770147-34769690 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 23 |
| Conread position: | 467-904 |
| Cow position: | chr25:36844631-36844203 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 269 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 307, 275 |
| Conread position: | 468-902 |
| Cow position: | chr25:23420054-23420471 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 278 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 32, 21 |
| Conread position: | 474-912 |
| Cow position: | chr25:34762825-34763260 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 277, 294 |
| Conread position: | 477-801 |
| Cow position: | chr25:366724-367048 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 187, 194 |
| Conread position: | 477-889 |
| Cow position: | chr25:346447-346858 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 187, 193 |
| Conread position: | 478-912 |
| Cow position: | chr25:22235829-22236263 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 279, 294 |
| Conread position: | 480-915 |
| Cow position: | chr25:34473509-34473940 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 277, 300 |
| Conread position: | 500-907 |
| Cow position: | chr25:3663953-3664360 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 43, 20 |
| Conread position: | 531-859 |
| Cow position: | chr25:18642202-18641871 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 541-907 |
| Cow position: | chr25:33305421-33305062 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 543-830 |
| Cow position: | chr25:36844639-36844352 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 223, 234 |
| Conread position: | 546-904 |
| Cow position: | chr25:33144833-33145188 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 240 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 184, 178 |
| Conread position: | 551-907 |
| Cow position: | chr25:33127707-33128063 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 557-904 |
| Cow position: | chr25:346443-346790 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 227 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 307, 315 |
| Conread position: | 562-890 |
| Cow position: | chr25:366725-367053 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 196, 205 |
| Conread position: | 577-907 |
| Cow position: | chr25:34446953-34447283 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 217 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 581-907 |
| Cow position: | chr25:33127652-33127979 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 219 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 585-907 |
| Cow position: | chr25:326352-326674 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 597-904 |
| Cow position: | chr25:34446889-34447196 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 32, 39 |
| Conread position: | 605-907 |
| Cow position: | chr25:34770165-34769863 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 212 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 57, 40 |
| Conread position: | 610-907 |
| Cow position: | chr25:18642207-18641907 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 142, 264 |
| Conread position: | 622-907 |
| Cow position: | chr25:36844644-36844359 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 163, 141 |
| Conread position: | 625-904 |
| Cow position: | chr25:414795-414522 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 639-907 |
| Cow position: | chr25:34732615-34732347 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 121, 143 |
| Conread position: | 646-907 |
| Cow position: | chr25:366725-366986 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 113, 129 |
| Conread position: | 647-919 |
| Cow position: | chr25:427330-427605 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 111, 137 |
| Conread position: | 652-907 |
| Cow position: | chr25:346454-346709 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 107, 123 |
| Conread position: | 713-907 |
| Cow position: | chr25:34433003-34433197 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 46, 57 |
Show alignments to all cow chromosomes.