Cow genome map
Conread name: | Ss1.1-rjej03b_m20.5 |
Conread position: | 1-188 |
Cow position: | chr28:33210423-33210611 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 132 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 139, 172 |
Conread position: | 1-340 |
Cow position: | chr28:9290364-9290700 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 229 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 211, 6 |
Conread position: | 1-489 |
Cow position: | chr28:9253131-9253618 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 204, 7 |
Conread position: | 1-494 |
Cow position: | chr28:34696107-34696598 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 96 |
Conread position: | 1-497 |
Cow position: | chr28:7810459-7810946 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 317 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 195, 76 |
Conread position: | 1-654 |
Cow position: | chr28:9252962-9253615 (view UCSC Genome Browser custom track) |
Alignm length: | 654 |
Alignm identity: | 439 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-819 |
Cow position: | chr28:7758032-7758832 (view UCSC Genome Browser custom track) |
Alignm length: | 820 |
Alignm identity: | 488 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 180, 6 |
Conread position: | 1-892 |
Cow position: | chr28:7757444-7758334 (view UCSC Genome Browser custom track) |
Alignm length: | 893 |
Alignm identity: | 592 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 517, 7 |
Conread position: | 1-902 |
Cow position: | chr28:9298844-9299724 (view UCSC Genome Browser custom track) |
Alignm length: | 903 |
Alignm identity: | 571 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 6 |
Conread position: | 1-903 |
Cow position: | chr28:7757696-7758581 (view UCSC Genome Browser custom track) |
Alignm length: | 907 |
Alignm identity: | 570 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 182, 6 |
Conread position: | 3-356 |
Cow position: | chr28:33210257-33210611 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 305, 0 |
Conread position: | 4-746 |
Cow position: | chr28:11334107-11333371 (view UCSC Genome Browser custom track) |
Alignm length: | 755 |
Alignm identity: | 491 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 94 |
Conread position: | 4-768 |
Cow position: | chr28:11333939-11333175 (view UCSC Genome Browser custom track) |
Alignm length: | 776 |
Alignm identity: | 470 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 278, 265 |
Conread position: | 14-767 |
Cow position: | chr28:7758128-7758865 (view UCSC Genome Browser custom track) |
Alignm length: | 757 |
Alignm identity: | 453 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 175, 184 |
Conread position: | 19-834 |
Cow position: | chr28:9298946-9299739 (view UCSC Genome Browser custom track) |
Alignm length: | 824 |
Alignm identity: | 526 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 48 |
Conread position: | 20-746 |
Cow position: | chr28:34695874-34696598 (view UCSC Genome Browser custom track) |
Alignm length: | 729 |
Alignm identity: | 464 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 106 |
Conread position: | 25-907 |
Cow position: | chr28:9289807-9290679 (view UCSC Genome Browser custom track) |
Alignm length: | 890 |
Alignm identity: | 567 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 76 |
Conread position: | 26-466 |
Cow position: | chr28:34673491-34673931 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 273 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 63, 72 |
Conread position: | 26-902 |
Cow position: | chr28:9298286-9299155 (view UCSC Genome Browser custom track) |
Alignm length: | 883 |
Alignm identity: | 543 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 24 |
Conread position: | 28-508 |
Cow position: | chr28:9290224-9290700 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 28-901 |
Cow position: | chr28:9298704-9299560 (view UCSC Genome Browser custom track) |
Alignm length: | 877 |
Alignm identity: | 570 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 110 |
Conread position: | 33-901 |
Cow position: | chr28:34695719-34696585 (view UCSC Genome Browser custom track) |
Alignm length: | 873 |
Alignm identity: | 552 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 73 |
Conread position: | 35-552 |
Cow position: | chr28:34679499-34678985 (view UCSC Genome Browser custom track) |
Alignm length: | 532 |
Alignm identity: | 336 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 77, 62 |
Conread position: | 35-664 |
Cow position: | chr28:7810325-7810945 (view UCSC Genome Browser custom track) |
Alignm length: | 632 |
Alignm identity: | 429 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 335, 203 |
Conread position: | 36-549 |
Cow position: | chr28:34673417-34673930 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 317 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 56, 62 |
Conread position: | 36-671 |
Cow position: | chr28:9290066-9290695 (view UCSC Genome Browser custom track) |
Alignm length: | 639 |
Alignm identity: | 413 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 136, 147 |
Conread position: | 36-864 |
Cow position: | chr28:11333991-11333161 (view UCSC Genome Browser custom track) |
Alignm length: | 841 |
Alignm identity: | 522 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 337, 326 |
Conread position: | 36-902 |
Cow position: | chr28:9252747-9253611 (view UCSC Genome Browser custom track) |
Alignm length: | 871 |
Alignm identity: | 578 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 197, 127 |
Conread position: | 37-548 |
Cow position: | chr28:7758387-7758898 (view UCSC Genome Browser custom track) |
Alignm length: | 517 |
Alignm identity: | 325 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 168, 152 |
Conread position: | 37-902 |
Cow position: | chr28:7757983-7758831 (view UCSC Genome Browser custom track) |
Alignm length: | 867 |
Alignm identity: | 520 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 714, 317 |
Conread position: | 40-907 |
Cow position: | chr28:7757398-7758265 (view UCSC Genome Browser custom track) |
Alignm length: | 870 |
Alignm identity: | 577 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 133 |
Conread position: | 41-852 |
Cow position: | chr28:11334154-11333349 (view UCSC Genome Browser custom track) |
Alignm length: | 815 |
Alignm identity: | 507 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 136, 129 |
Conread position: | 41-907 |
Cow position: | chr28:9252587-9253448 (view UCSC Genome Browser custom track) |
Alignm length: | 872 |
Alignm identity: | 559 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 83 |
Conread position: | 52-554 |
Cow position: | chr28:34679564-34679072 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 327 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 226, 15 |
Conread position: | 58-449 |
Cow position: | chr28:33210228-33210620 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 37 |
Conread position: | 60-907 |
Cow position: | chr28:7757334-7758181 (view UCSC Genome Browser custom track) |
Alignm length: | 852 |
Alignm identity: | 571 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 136 |
Conread position: | 64-907 |
Cow position: | chr28:9252694-9253532 (view UCSC Genome Browser custom track) |
Alignm length: | 846 |
Alignm identity: | 550 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 124, 53 |
Conread position: | 78-753 |
Cow position: | chr28:7810284-7810950 (view UCSC Genome Browser custom track) |
Alignm length: | 680 |
Alignm identity: | 447 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 120 |
Conread position: | 112-863 |
Cow position: | chr28:9252904-9253658 (view UCSC Genome Browser custom track) |
Alignm length: | 758 |
Alignm identity: | 507 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 87 |
Conread position: | 116-904 |
Cow position: | chr28:9298209-9298991 (view UCSC Genome Browser custom track) |
Alignm length: | 796 |
Alignm identity: | 491 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 32 |
Conread position: | 125-902 |
Cow position: | chr28:11334154-11333383 (view UCSC Genome Browser custom track) |
Alignm length: | 782 |
Alignm identity: | 489 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 149 |
Conread position: | 142-570 |
Cow position: | chr28:33210228-33210657 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 270 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 334, 0 |
Conread position: | 142-729 |
Cow position: | chr28:7758324-7758911 (view UCSC Genome Browser custom track) |
Alignm length: | 591 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 382, 389 |
Conread position: | 214-845 |
Cow position: | chr28:9298555-9299182 (view UCSC Genome Browser custom track) |
Alignm length: | 636 |
Alignm identity: | 409 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 51 |
Conread position: | 217-832 |
Cow position: | chr28:7810339-7810945 (view UCSC Genome Browser custom track) |
Alignm length: | 621 |
Alignm identity: | 421 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 140, 148 |
Conread position: | 217-894 |
Cow position: | chr28:11334146-11333469 (view UCSC Genome Browser custom track) |
Alignm length: | 682 |
Alignm identity: | 447 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 48 |
Conread position: | 217-907 |
Cow position: | chr28:9298643-9299314 (view UCSC Genome Browser custom track) |
Alignm length: | 693 |
Alignm identity: | 451 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 236, 23 |
Conread position: | 222-619 |
Cow position: | chr28:33210223-33210622 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 44 |
Conread position: | 224-801 |
Cow position: | chr28:34673353-34673930 (view UCSC Genome Browser custom track) |
Alignm length: | 584 |
Alignm identity: | 360 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 282, 291 |
Conread position: | 227-907 |
Cow position: | chr28:34695829-34696509 (view UCSC Genome Browser custom track) |
Alignm length: | 689 |
Alignm identity: | 449 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 157 |
Conread position: | 235-904 |
Cow position: | chr28:11334212-11333543 (view UCSC Genome Browser custom track) |
Alignm length: | 673 |
Alignm identity: | 436 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 31 |
Conread position: | 289-780 |
Cow position: | chr28:34679579-34679098 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 313 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 76, 33 |
Conread position: | 289-907 |
Cow position: | chr28:7810327-7810936 (view UCSC Genome Browser custom track) |
Alignm length: | 621 |
Alignm identity: | 415 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 260, 210 |
Conread position: | 290-904 |
Cow position: | chr28:34695724-34696338 (view UCSC Genome Browser custom track) |
Alignm length: | 617 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 470, 477 |
Conread position: | 310-689 |
Cow position: | chr28:33210228-33210608 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 334, 0 |
Conread position: | 319-886 |
Cow position: | chr28:34673364-34673931 (view UCSC Genome Browser custom track) |
Alignm length: | 572 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 261, 294 |
Conread position: | 319-907 |
Cow position: | chr28:11334212-11333624 (view UCSC Genome Browser custom track) |
Alignm length: | 592 |
Alignm identity: | 377 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 32 |
Conread position: | 329-907 |
Cow position: | chr28:7810283-7810852 (view UCSC Genome Browser custom track) |
Alignm length: | 580 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 192, 202 |
Conread position: | 394-822 |
Cow position: | chr28:33210228-33210657 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 334, 0 |
Conread position: | 402-899 |
Cow position: | chr28:11334213-11333716 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 362, 374 |
Conread position: | 406-863 |
Cow position: | chr28:34679548-34679099 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 299 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 49, 31 |
Conread position: | 420-901 |
Cow position: | chr28:9289782-9290257 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 313 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 274, 103 |
Conread position: | 448-854 |
Cow position: | chr28:34679588-34679181 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 277 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 85, 42 |
Conread position: | 458-902 |
Cow position: | chr28:9252584-9253023 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 265 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 57, 50 |
Conread position: | 459-907 |
Cow position: | chr28:34695809-34696257 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 177, 171 |
Conread position: | 476-858 |
Cow position: | chr28:34673353-34673735 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 249 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 129, 139 |
Conread position: | 540-831 |
Cow position: | chr28:7810251-7810533 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 204 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 552-902 |
Cow position: | chr28:11334231-11333881 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 219 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 207, 226 |
Conread position: | 561-907 |
Cow position: | chr28:33210227-33210574 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 335, 0 |
Show alignments to all cow chromosomes.