Cow genome map

Conread name: Ss1.1-rjej03b_m20.5

Conread position: 1-434
Cow position:
Alignm length: 435
Alignm identity: 270
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 357, 7

Conread position: 1-677
Cow position:
Alignm length: 678
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 6

Conread position: 1-727
Cow position:
Alignm length: 730
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 172

Conread position: 1-853
Cow position:
Alignm length: 865
Alignm identity: 570
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 357

Conread position: 1-853
Cow position:
Alignm length: 855
Alignm identity: 571
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 171

Conread position: 1-901
Cow position:
Alignm length: 905
Alignm identity: 599
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 96

Conread position: 1-902
Cow position:
Alignm length: 905
Alignm identity: 600
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 7

Conread position: 1-902
Cow position:
Alignm length: 905
Alignm identity: 627
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 11

Conread position: 1-902
Cow position:
Alignm length: 906
Alignm identity: 615
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 205

Conread position: 1-907
Cow position:
Alignm length: 909
Alignm identity: 583
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 221

Conread position: 1-907
Cow position:
Alignm length: 916
Alignm identity: 611
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 31

Conread position: 1-907
Cow position:
Alignm length: 910
Alignm identity: 615
Alignm E-value: 0
Alignm gaps (pig, cow): 353, 362

Conread position: 9-717
Cow position:
Alignm length: 712
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 444

Conread position: 22-902
Cow position:
Alignm length: 883
Alignm identity: 579
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 84

Conread position: 25-825
Cow position:
Alignm length: 803
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 250

Conread position: 26-907
Cow position:
Alignm length: 884
Alignm identity: 596
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 78

Conread position: 27-642
Cow position:
Alignm length: 620
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 241

Conread position: 27-907
Cow position:
Alignm length: 885
Alignm identity: 586
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 145

Conread position: 27-907
Cow position:
Alignm length: 889
Alignm identity: 566
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 150

Conread position: 28-342
Cow position:
Alignm length: 316
Alignm identity: 200
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 159, 168

Conread position: 28-396
Cow position:
Alignm length: 371
Alignm identity: 247
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 151, 144

Conread position: 28-907
Cow position:
Alignm length: 882
Alignm identity: 604
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 142

Conread position: 31-907
Cow position:
Alignm length: 881
Alignm identity: 588
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 142

Conread position: 32-859
Cow position:
Alignm length: 831
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 72

Conread position: 32-896
Cow position:
Alignm length: 870
Alignm identity: 591
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 146

Conread position: 35-897
Cow position:
Alignm length: 864
Alignm identity: 573
Alignm E-value: 0
Alignm gaps (pig, cow): 832, 840

Conread position: 36-845
Cow position:
Alignm length: 812
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 137

Conread position: 36-851
Cow position:
Alignm length: 820
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 136

Conread position: 37-811
Cow position:
Alignm length: 781
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 72

Conread position: 48-907
Cow position:
Alignm length: 863
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 55

Conread position: 58-903
Cow position:
Alignm length: 850
Alignm identity: 580
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 121

Conread position: 60-907
Cow position:
Alignm length: 850
Alignm identity: 570
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 304

Conread position: 119-907
Cow position:
Alignm length: 798
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 85

Conread position: 205-638
Cow position:
Alignm length: 435
Alignm identity: 268
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 150, 158

Conread position: 225-899
Cow position:
Alignm length: 676
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 40

Conread position: 236-672
Cow position:
Alignm length: 437
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 401-818
Cow position:
Alignm length: 422
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 298

Conread position: 470-907
Cow position:
Alignm length: 442
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 48

Conread position: 498-902
Cow position:
Alignm length: 409
Alignm identity: 260
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 151, 144

Conread position: 545-902
Cow position:
Alignm length: 358
Alignm identity: 237
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 574-907
Cow position:
Alignm length: 336
Alignm identity: 210
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 129, 123

Conread position: 579-901
Cow position:
Alignm length: 324
Alignm identity: 218
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 274, 286

Conread position: 618-901
Cow position:
Alignm length: 284
Alignm identity: 187
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 747-902
Cow position:
Alignm length: 156
Alignm identity: 111
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.