Cow genome map
| Conread name: | Ss1.1-rjej10b_e8.5 |
| Conread position: | 708-847 |
| Cow position: | chr17:22563743-22563880 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 64 |
| Conread position: | 715-817 |
| Cow position: | chr17:21115642-21115540 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 716-807 |
| Cow position: | chr17:6423290-6423382 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 81 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 716-809 |
| Cow position: | chr17:6566042-6566135 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 82 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 716-811 |
| Cow position: | chr17:29472044-29472141 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 83 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 716-815 |
| Cow position: | chr17:6155597-6155696 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 82 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 716-815 |
| Cow position: | chr17:17221908-17222007 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 82 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 716-835 |
| Cow position: | chr17:29356719-29356602 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 716-836 |
| Cow position: | chr17:20912167-20912288 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 716-842 |
| Cow position: | chr17:25140815-25140933 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 716-842 |
| Cow position: | chr17:38363701-38363578 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 716-849 |
| Cow position: | chr17:20993479-20993353 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 716-849 |
| Cow position: | chr17:30712603-30712727 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 716-850 |
| Cow position: | chr17:40393589-40393718 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 716-856 |
| Cow position: | chr17:15364004-15363865 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 127, 107 |
| Conread position: | 717-818 |
| Cow position: | chr17:25193950-25194051 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 83 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 717-835 |
| Cow position: | chr17:29898191-29898308 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 88, 107 |
| Conread position: | 724-849 |
| Cow position: | chr17:11102219-11102096 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 26, 100 |
Show alignments to all cow chromosomes.