Cow genome map
| Conread name: | Ss1.1-rjej10b_e8.5 |
| Conread position: | 1-95 |
| Cow position: | chr2:80739414-80739319 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 82 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 701-861 |
| Cow position: | chr2:80739064-80738908 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 78, 22 |
| Conread position: | 703-835 |
| Cow position: | chr2:78197057-78197187 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 706-842 |
| Cow position: | chr2:27076210-27076348 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 11, 122 |
| Conread position: | 716-807 |
| Cow position: | chr2:20979874-20979965 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 82 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 716-810 |
| Cow position: | chr2:16514310-16514406 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 82 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 716-811 |
| Cow position: | chr2:16593852-16593948 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 82 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 716-811 |
| Cow position: | chr2:16632181-16632277 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 82 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 716-811 |
| Cow position: | chr2:53574654-53574750 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 83 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 716-813 |
| Cow position: | chr2:43596645-43596548 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 83 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 716-815 |
| Cow position: | chr2:14218288-14218387 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 82 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 716-817 |
| Cow position: | chr2:39280721-39280823 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 716-830 |
| Cow position: | chr2:66480814-66480700 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 716-835 |
| Cow position: | chr2:20856307-20856190 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 716-840 |
| Cow position: | chr2:14349292-14349412 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 716-840 |
| Cow position: | chr2:39263007-39263128 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 43, 18 |
| Conread position: | 716-842 |
| Cow position: | chr2:7193726-7193848 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 716-842 |
| Cow position: | chr2:11696655-11696777 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 716-842 |
| Cow position: | chr2:26102268-26102391 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 716-842 |
| Cow position: | chr2:40790783-40790904 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 716-843 |
| Cow position: | chr2:61821243-61821367 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 716-849 |
| Cow position: | chr2:28681390-28681262 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 716-849 |
| Cow position: | chr2:55876923-55877050 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 716-849 |
| Cow position: | chr2:64197472-64197343 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 716-849 |
| Cow position: | chr2:77358998-77359128 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 716-849 |
| Cow position: | chr2:80796419-80796548 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 716-851 |
| Cow position: | chr2:2688663-2688793 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 716-851 |
| Cow position: | chr2:29802612-29802483 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 716-896 |
| Cow position: | chr2:62225700-62225877 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 29, 86 |
| Conread position: | 717-818 |
| Cow position: | chr2:19871984-19872085 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 717-842 |
| Cow position: | chr2:19502830-19502709 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 717-843 |
| Cow position: | chr2:29612087-29612210 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 718-835 |
| Cow position: | chr2:29733806-29733922 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 719-842 |
| Cow position: | chr2:65036889-65036768 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 26, 99 |
| Conread position: | 719-849 |
| Cow position: | chr2:16018761-16018632 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 724-840 |
| Cow position: | chr2:23271404-23271291 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 725-842 |
| Cow position: | chr2:43120627-43120741 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 98, 0 |
Show alignments to all cow chromosomes.