Cow genome map


           Conread name:
           Ss1.1-rjej10b_e8.5
        

               Conread position:
               695-844
               

               Cow position:
               chr24:43432258-43432402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               709-841
               

               Cow position:
               chr24:8886371-8886502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               5, 116
               

               Conread position:
               716-810
               

               Cow position:
               chr24:7001570-7001476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               81
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               716-814
               

               Cow position:
               chr24:27905926-27906025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               85
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               716-830
               

               Cow position:
               chr24:37946352-37946239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               716-840
               

               Cow position:
               chr24:17833951-17833830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               716-842
               

               Cow position:
               chr24:29130722-29130599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               716-865
               

               Cow position:
               chr24:41063285-41063430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               716-869
               

               Cow position:
               chr24:5682783-5682933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               718-849
               

               Cow position:
               chr24:15372619-15372745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               723-901
               

               Cow position:
               chr24:32370413-32370237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               27, 101
               

               Conread position:
               731-842
               

               Cow position:
               chr24:30545372-30545264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               92, 0
               
Show alignments to all cow chromosomes.