Cow genome map


           Conread name:
           Ss1.1-rjej10b_e8.5
        

               Conread position:
               715-850
               

               Cow position:
               chr25:13332938-13333071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               35, 103
               

               Conread position:
               716-807
               

               Cow position:
               chr25:17562590-17562681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               80
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               716-815
               

               Cow position:
               chr25:17658135-17658234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               83
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               716-833
               

               Cow position:
               chr25:15024691-15024806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               716-836
               

               Cow position:
               chr25:10633195-10633076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               716-842
               

               Cow position:
               chr25:36962479-36962355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               716-850
               

               Cow position:
               chr25:23914462-23914594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               121, 84
               

               Conread position:
               717-857
               

               Cow position:
               chr25:18292600-18292738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               127, 104
               

               Conread position:
               718-842
               

               Cow position:
               chr25:38135245-38135365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               725-842
               

               Cow position:
               chr25:18448359-18448475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               100, 19
               
Show alignments to all cow chromosomes.