Cow genome map
| Conread name: | Ss1.1-rjej30b_g21.5 | 
| Conread position: | 14-228 | 
| Cow position: | chr3:8168808-8169023 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 129, 20 | 
| Conread position: | 229-595 | 
| Cow position: | chr3:26675899-26675541 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 112, 65 | 
| Conread position: | 248-561 | 
| Cow position: | chr3:44795982-44795685 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 251-508 | 
| Cow position: | chr3:70472464-70472721 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 260-369 | 
| Cow position: | chr3:8169134-8169243 (view UCSC Genome Browser custom track) | 
| Alignm length: | 110 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 344-480 | 
| Cow position: | chr3:8169773-8169909 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 478-563 | 
| Cow position: | chr3:8170183-8170268 (view UCSC Genome Browser custom track) | 
| Alignm length: | 86 | 
| Alignm identity: | 79 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 670-1169 | 
| Cow position: | chr3:8171404-8171908 (view UCSC Genome Browser custom track) | 
| Alignm length: | 514 | 
| Alignm identity: | 407 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 109, 193 | 
Show alignments to all cow chromosomes.
