Cow genome map


           Conread name:
           Ss1.1-rjej31b_f4.5
        

               Conread position:
               227-529
               

               Cow position:
               chr23:25691665-25691357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               44, 278
               

               Conread position:
               237-568
               

               Cow position:
               chr23:24648116-24648447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               72, 54
               

               Conread position:
               241-574
               

               Cow position:
               chr23:24622848-24623181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               41, 64
               

               Conread position:
               244-556
               

               Cow position:
               chr23:24527439-24527127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               33, 6
               

               Conread position:
               244-570
               

               Cow position:
               chr23:25658174-25658499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               301-572
               

               Cow position:
               chr23:25617606-25617877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               192
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               303-552
               

               Cow position:
               chr23:25730705-25730456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               311-544
               

               Cow position:
               chr23:24568082-24567849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               321-573
               

               Cow position:
               chr23:25703102-25702850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               186
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               193, 185
               

               Conread position:
               321-580
               

               Cow position:
               chr23:24538680-24538421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.