Cow genome map
| Conread name: | Ss1.1-rjej32b_f22.5 | 
| Conread position: | 6-213 | 
| Cow position: | chr3:77355074-77355269 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 0 | 
| Conread position: | 210-461 | 
| Cow position: | chr3:77375029-77375277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 0 | 
| Conread position: | 455-566 | 
| Cow position: | chr3:77377674-77377785 (view UCSC Genome Browser custom track) | 
| Alignm length: | 112 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 559-658 | 
| Cow position: | chr3:77381479-77381578 (view UCSC Genome Browser custom track) | 
| Alignm length: | 100 | 
| Alignm identity: | 83 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 657-746 | 
| Cow position: | chr3:77384826-77384915 (view UCSC Genome Browser custom track) | 
| Alignm length: | 90 | 
| Alignm identity: | 85 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 744-839 | 
| Cow position: | chr3:77386562-77386657 (view UCSC Genome Browser custom track) | 
| Alignm length: | 96 | 
| Alignm identity: | 91 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 840-972 | 
| Cow position: | chr3:77388420-77388552 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 970-1202 | 
| Cow position: | chr3:77391588-77391824 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 0 | 
| Conread position: | 1196-1325 | 
| Cow position: | chr3:77393508-77393637 (view UCSC Genome Browser custom track) | 
| Alignm length: | 130 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 1325-1462 | 
| Cow position: | chr3:77394376-77394513 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 1459-1596 | 
| Cow position: | chr3:77396323-77396460 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
Show alignments to all cow chromosomes.
