Cow genome map
| Conread name: | Ss1.1-rlin03_j17.5 |
| Conread position: | 261-511 |
| Cow position: | chr13:47576139-47576385 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 159, 18 |
| Conread position: | 261-592 |
| Cow position: | chr13:19637192-19637520 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 18 |
| Conread position: | 262-421 |
| Cow position: | chr13:6359888-6360047 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 98, 17 |
| Conread position: | 262-421 |
| Cow position: | chr13:16921503-16921661 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 262-421 |
| Cow position: | chr13:32321535-32321376 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 90, 17 |
| Conread position: | 262-461 |
| Cow position: | chr13:60511619-60511820 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-465 |
| Cow position: | chr13:9299930-9300129 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-476 |
| Cow position: | chr13:21838171-21837956 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-487 |
| Cow position: | chr13:21698321-21698547 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-491 |
| Cow position: | chr13:8069111-8068880 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-496 |
| Cow position: | chr13:19044518-19044286 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 149, 17 |
| Conread position: | 262-506 |
| Cow position: | chr13:36867953-36868195 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-555 |
| Cow position: | chr13:7049693-7049978 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 157, 17 |
| Conread position: | 262-584 |
| Cow position: | chr13:4735320-4735643 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 18 |
| Conread position: | 262-585 |
| Cow position: | chr13:54144853-54145171 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 225 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 175, 18 |
| Conread position: | 262-588 |
| Cow position: | chr13:16817120-16817448 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 228 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 262-590 |
| Cow position: | chr13:26846534-26846851 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-591 |
| Cow position: | chr13:43032775-43033096 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 177, 17 |
| Conread position: | 262-592 |
| Cow position: | chr13:4485896-4486229 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-592 |
| Cow position: | chr13:4943430-4943760 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 262-592 |
| Cow position: | chr13:6666095-6665759 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 19 |
| Conread position: | 262-592 |
| Cow position: | chr13:13901909-13902236 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 17 |
| Conread position: | 262-592 |
| Cow position: | chr13:15279748-15279417 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-592 |
| Cow position: | chr13:18331064-18330751 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 231 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 224, 17 |
| Conread position: | 262-592 |
| Cow position: | chr13:21400885-21401220 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 237 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 146, 17 |
| Conread position: | 262-592 |
| Cow position: | chr13:30305239-30305567 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-592 |
| Cow position: | chr13:30470321-30470001 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 262-592 |
| Cow position: | chr13:32548802-32549134 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-592 |
| Cow position: | chr13:32735142-32734812 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 17 |
| Conread position: | 262-592 |
| Cow position: | chr13:33334300-33333973 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 262-592 |
| Cow position: | chr13:34040301-34039966 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 17 |
| Conread position: | 262-592 |
| Cow position: | chr13:34343955-34344286 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-592 |
| Cow position: | chr13:60698751-60698426 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 228 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 136, 17 |
| Conread position: | 262-593 |
| Cow position: | chr13:14401056-14400744 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-593 |
| Cow position: | chr13:20539801-20539490 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 158, 10 |
| Conread position: | 262-593 |
| Cow position: | chr13:30653241-30652909 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 17 |
| Conread position: | 262-593 |
| Cow position: | chr13:33169724-33169413 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 168, 17 |
| Conread position: | 262-593 |
| Cow position: | chr13:33523914-33523580 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 17 |
| Conread position: | 262-593 |
| Cow position: | chr13:34870006-34870337 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 16 |
| Conread position: | 262-593 |
| Cow position: | chr13:35539207-35539542 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-593 |
| Cow position: | chr13:36348072-36347744 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 17 |
| Conread position: | 262-593 |
| Cow position: | chr13:47368209-47368549 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 66 |
| Conread position: | 262-593 |
| Cow position: | chr13:54239383-54239052 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 160, 17 |
| Conread position: | 262-595 |
| Cow position: | chr13:562345-562009 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-595 |
| Cow position: | chr13:679822-680153 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 262-595 |
| Cow position: | chr13:3023238-3022903 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 262-595 |
| Cow position: | chr13:3692905-3692569 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-595 |
| Cow position: | chr13:4733576-4733911 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 18 |
| Conread position: | 262-595 |
| Cow position: | chr13:5499936-5499609 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 262-595 |
| Cow position: | chr13:11389249-11389585 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 17 |
| Conread position: | 262-595 |
| Cow position: | chr13:11737798-11738134 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-595 |
| Cow position: | chr13:17310461-17310795 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-595 |
| Cow position: | chr13:19394964-19394650 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-595 |
| Cow position: | chr13:19565759-19566096 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-595 |
| Cow position: | chr13:23455481-23455817 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 17 |
| Conread position: | 262-595 |
| Cow position: | chr13:24932750-24932415 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 17 |
| Conread position: | 262-595 |
| Cow position: | chr13:30240600-30240929 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 234 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 161, 17 |
| Conread position: | 262-595 |
| Cow position: | chr13:34509765-34509438 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 17 |
| Conread position: | 262-595 |
| Cow position: | chr13:49613491-49613162 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 262-595 |
| Cow position: | chr13:50191584-50191247 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 17 |
| Conread position: | 262-596 |
| Cow position: | chr13:22274854-22275190 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 17 |
| Conread position: | 262-600 |
| Cow position: | chr13:5230900-5230566 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 239 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 153, 17 |
| Conread position: | 263-589 |
| Cow position: | chr13:6440916-6441226 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 263-591 |
| Cow position: | chr13:31508954-31509287 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 236 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 157, 16 |
| Conread position: | 263-594 |
| Cow position: | chr13:3481814-3481486 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 16 |
| Conread position: | 265-406 |
| Cow position: | chr13:54312149-54312288 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 265-481 |
| Cow position: | chr13:21854371-21854577 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 155, 13 |
| Conread position: | 265-505 |
| Cow position: | chr13:11762590-11762349 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 14 |
| Conread position: | 265-511 |
| Cow position: | chr13:1635618-1635869 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 155, 14 |
| Conread position: | 265-582 |
| Cow position: | chr13:23404432-23404122 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 227 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 155, 8 |
| Conread position: | 265-588 |
| Cow position: | chr13:25381451-25381774 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 108, 14 |
| Conread position: | 265-590 |
| Cow position: | chr13:24236621-24236937 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 155, 14 |
| Conread position: | 265-591 |
| Cow position: | chr13:3313682-3314000 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 127, 14 |
| Conread position: | 265-592 |
| Cow position: | chr13:15922410-15922083 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 14 |
| Conread position: | 265-592 |
| Cow position: | chr13:31728851-31728523 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 14 |
| Conread position: | 265-593 |
| Cow position: | chr13:669292-669622 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 14 |
| Conread position: | 265-593 |
| Cow position: | chr13:41338604-41338287 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 161, 14 |
| Conread position: | 265-593 |
| Cow position: | chr13:61953287-61953614 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 230 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 161, 14 |
| Conread position: | 265-594 |
| Cow position: | chr13:30089226-30089565 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 47, 14 |
| Conread position: | 265-595 |
| Cow position: | chr13:13326988-13327316 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 14 |
| Conread position: | 265-595 |
| Cow position: | chr13:39042326-39041980 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 244 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 87, 14 |
| Conread position: | 265-595 |
| Cow position: | chr13:44463886-44463556 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 220 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 94, 14 |
| Conread position: | 265-595 |
| Cow position: | chr13:50111514-50111847 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 14 |
| Conread position: | 265-595 |
| Cow position: | chr13:60647534-60647207 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 14 |
| Conread position: | 266-511 |
| Cow position: | chr13:20573043-20572803 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 153, 13 |
| Conread position: | 266-560 |
| Cow position: | chr13:3652214-3651920 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 13 |
| Conread position: | 266-589 |
| Cow position: | chr13:37833844-37833524 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 154, 13 |
| Conread position: | 266-595 |
| Cow position: | chr13:49975724-49976047 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 236 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 154, 13 |
| Conread position: | 267-569 |
| Cow position: | chr13:39922663-39922379 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 189, 12 |
| Conread position: | 267-592 |
| Cow position: | chr13:21879764-21879429 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 257 |
| Conread position: | 267-595 |
| Cow position: | chr13:49194666-49194342 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 13 |
| Conread position: | 267-596 |
| Cow position: | chr13:5288069-5288390 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 93, 8 |
| Conread position: | 268-590 |
| Cow position: | chr13:34050748-34051071 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 154, 11 |
| Conread position: | 268-595 |
| Cow position: | chr13:38076244-38075919 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 248 |
| Conread position: | 269-595 |
| Cow position: | chr13:8649283-8649604 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 15, 27 |
| Conread position: | 269-595 |
| Cow position: | chr13:59404101-59403770 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 235 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 151, 10 |
| Conread position: | 271-520 |
| Cow position: | chr13:44650864-44650613 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 167, 40 |
| Conread position: | 271-595 |
| Cow position: | chr13:26589035-26588709 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 126, 119 |
| Conread position: | 274-595 |
| Cow position: | chr13:60921699-60921395 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 109, 57 |
| Conread position: | 276-590 |
| Cow position: | chr13:21906879-21906565 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 222 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 155, 64 |
| Conread position: | 276-590 |
| Cow position: | chr13:44324905-44324581 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 35, 9 |
| Conread position: | 276-594 |
| Cow position: | chr13:36105190-36105515 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 150, 111 |
| Conread position: | 276-595 |
| Cow position: | chr13:22480059-22480380 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 5 |
| Conread position: | 276-595 |
| Cow position: | chr13:28527850-28527529 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 58 |
| Conread position: | 276-595 |
| Cow position: | chr13:32983343-32983020 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 277-521 |
| Cow position: | chr13:34906467-34906228 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 143, 9 |
| Conread position: | 277-592 |
| Cow position: | chr13:5516268-5515952 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 92 |
| Conread position: | 277-592 |
| Cow position: | chr13:32923214-32922898 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 142 |
| Conread position: | 277-592 |
| Cow position: | chr13:35759615-35759932 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 218 |
| Conread position: | 277-593 |
| Cow position: | chr13:11827665-11827351 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 143, 90 |
| Conread position: | 277-593 |
| Cow position: | chr13:30795631-30795318 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 222 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 160, 26 |
| Conread position: | 277-595 |
| Cow position: | chr13:15559393-15559713 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 16 |
| Conread position: | 278-589 |
| Cow position: | chr13:19122449-19122133 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 145, 93 |
| Conread position: | 280-593 |
| Cow position: | chr13:1142415-1142095 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 143, 207 |
| Conread position: | 281-575 |
| Cow position: | chr13:34688503-34688208 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 26, 69 |
| Conread position: | 281-582 |
| Cow position: | chr13:14646449-14646141 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 285-541 |
| Cow position: | chr13:21851928-21852183 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 135, 70 |
| Conread position: | 285-590 |
| Cow position: | chr13:3533916-3533609 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 155, 193 |
| Conread position: | 285-595 |
| Cow position: | chr13:2872999-2872688 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 224 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 131, 180 |
| Conread position: | 285-596 |
| Cow position: | chr13:12732917-12732602 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 94, 24 |
| Conread position: | 286-587 |
| Cow position: | chr13:30036214-30035916 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 219 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 81, 160 |
| Conread position: | 287-593 |
| Cow position: | chr13:43591347-43591648 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 150, 47 |
| Conread position: | 288-526 |
| Cow position: | chr13:31334577-31334341 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 8, 65 |
| Conread position: | 288-587 |
| Cow position: | chr13:1047977-1047678 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 132, 70 |
| Conread position: | 293-595 |
| Cow position: | chr13:3555483-3555789 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 295-471 |
| Cow position: | chr13:34322927-34322750 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 125, 154 |
| Conread position: | 298-533 |
| Cow position: | chr13:21909020-21908784 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 69, 60 |
| Conread position: | 307-562 |
| Cow position: | chr13:17480656-17480390 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 97, 30 |
| Conread position: | 311-592 |
| Cow position: | chr13:9376983-9376705 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 109, 155 |
| Conread position: | 313-555 |
| Cow position: | chr13:11350498-11350744 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 68, 164 |
| Conread position: | 316-576 |
| Cow position: | chr13:26409125-26409391 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 199 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 67, 18 |
| Conread position: | 316-595 |
| Cow position: | chr13:394020-393750 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 107, 44 |
| Conread position: | 320-582 |
| Cow position: | chr13:27470065-27470328 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 40, 47 |
| Conread position: | 327-592 |
| Cow position: | chr13:19449426-19449690 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 94, 55 |
| Conread position: | 332-595 |
| Cow position: | chr13:36244800-36244526 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 59, 51 |
| Conread position: | 335-595 |
| Cow position: | chr13:32079978-32080242 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 335-596 |
| Cow position: | chr13:51182901-51183161 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 28, 64 |
| Conread position: | 336-595 |
| Cow position: | chr13:51466081-51465821 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 90, 41 |
| Conread position: | 338-595 |
| Cow position: | chr13:34763857-34763598 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 82, 203 |
| Conread position: | 344-595 |
| Cow position: | chr13:19230585-19230335 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 82, 33 |
| Conread position: | 348-595 |
| Cow position: | chr13:31379686-31379930 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 72, 111 |
| Conread position: | 348-595 |
| Cow position: | chr13:47569227-47569481 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 15, 9 |
| Conread position: | 349-595 |
| Cow position: | chr13:31731433-31731190 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 77, 10 |
| Conread position: | 350-595 |
| Cow position: | chr13:18122742-18122493 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 352-592 |
| Cow position: | chr13:1883353-1883113 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 75, 181 |
| Conread position: | 355-595 |
| Cow position: | chr13:22614772-22615012 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 53, 66 |
| Conread position: | 363-595 |
| Cow position: | chr13:2581940-2581715 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 365-592 |
| Cow position: | chr13:34088350-34088575 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 58, 26 |
| Conread position: | 366-595 |
| Cow position: | chr13:46528553-46528776 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 102, 57 |
| Conread position: | 385-595 |
| Cow position: | chr13:36671819-36672034 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 403-574 |
| Cow position: | chr13:19115216-19115042 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 421-595 |
| Cow position: | chr13:6360071-6360244 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 156, 24 |
| Conread position: | 422-595 |
| Cow position: | chr13:47729236-47729412 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 425-595 |
| Cow position: | chr13:51006819-51006646 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 426-593 |
| Cow position: | chr13:34322752-34322583 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 445-594 |
| Cow position: | chr13:17062072-17062221 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 135, 68 |
| Conread position: | 446-595 |
| Cow position: | chr13:644745-644595 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 457-595 |
| Cow position: | chr13:43891472-43891611 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 459-595 |
| Cow position: | chr13:2475363-2475503 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 59, 81 |
| Conread position: | 461-594 |
| Cow position: | chr13:9300414-9300548 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 461-595 |
| Cow position: | chr13:12658867-12659003 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 475-595 |
| Cow position: | chr13:22080902-22080782 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.