Cow genome map

Conread name: Ss1.1-rlin03_j17.5

Conread position: 244-595
Cow position: chr15:7848247-7848602 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 0

Conread position: 248-573
Cow position: chr15:13538955-13538638 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 212
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 172, 6

Conread position: 254-592
Cow position: chr15:32513013-32512686 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 238
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 14, 26

Conread position: 261-502
Cow position: chr15:6590236-6590002 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 158, 18

Conread position: 261-593
Cow position: chr15:29969429-29969108 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 18

Conread position: 262-403
Cow position: chr15:581334-581475 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 12

Conread position: 262-406
Cow position: chr15:314163-314022 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 262-406
Cow position: chr15:9002313-9002170 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 262-421
Cow position: chr15:51767473-51767318 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 262-431
Cow position: chr15:4924050-4924219 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 159, 17

Conread position: 262-437
Cow position: chr15:40102909-40103082 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 17, 0

Conread position: 262-446
Cow position: chr15:2432961-2433141 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 160, 17

Conread position: 262-473
Cow position: chr15:19736126-19735913 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 146, 17

Conread position: 262-499
Cow position: chr15:53411015-53411247 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 146, 17

Conread position: 262-502
Cow position: chr15:1878417-1878175 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 167
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 68, 17

Conread position: 262-534
Cow position: chr15:12494984-12494714 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 185
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 160, 17

Conread position: 262-535
Cow position: chr15:25105490-25105218 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 191
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 41, 17

Conread position: 262-555
Cow position: chr15:20848694-20848401 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 201
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 71, 17

Conread position: 262-556
Cow position: chr15:24795804-24796098 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 206
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 69, 16

Conread position: 262-565
Cow position: chr15:4917115-4917418 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 207
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 158, 17

Conread position: 262-585
Cow position: chr15:24297110-24297435 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-588
Cow position: chr15:2633792-2633467 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 229
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 160, 18

Conread position: 262-588
Cow position: chr15:8752814-8753126 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 219
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 87, 17

Conread position: 262-588
Cow position: chr15:41786765-41786444 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 223
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 93, 17

Conread position: 262-589
Cow position: chr15:12418791-12418463 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-589
Cow position: chr15:42531837-42532167 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 10

Conread position: 262-590
Cow position: chr15:18578628-18578958 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-590
Cow position: chr15:30727327-30727008 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-590
Cow position: chr15:40647510-40647189 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 208
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 167, 18

Conread position: 262-591
Cow position: chr15:2927171-2927494 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 226
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 175, 18

Conread position: 262-592
Cow position: chr15:1600500-1600836 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 226
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 104, 5

Conread position: 262-592
Cow position: chr15:2078561-2078879 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 229
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 164, 17

Conread position: 262-592
Cow position: chr15:2900335-2900005 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 17

Conread position: 262-592
Cow position: chr15:4387671-4387999 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 17

Conread position: 262-592
Cow position: chr15:4638853-4639183 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-592
Cow position: chr15:4727124-4727455 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-592
Cow position: chr15:5496978-5497305 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 17

Conread position: 262-592
Cow position: chr15:6551846-6551514 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-592
Cow position: chr15:7329843-7329519 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 228
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 157, 17

Conread position: 262-592
Cow position: chr15:7840219-7840552 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 232
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 96, 17

Conread position: 262-592
Cow position: chr15:14574392-14574054 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 225
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 84, 17

Conread position: 262-592
Cow position: chr15:14580230-14579897 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-592
Cow position: chr15:15345188-15344855 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-592
Cow position: chr15:20412515-20412847 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-592
Cow position: chr15:25123249-25122923 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 226
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 51, 11

Conread position: 262-592
Cow position: chr15:27747926-27748258 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-592
Cow position: chr15:32491972-32491640 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 230
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 164, 17

Conread position: 262-592
Cow position: chr15:50149238-50149571 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-593
Cow position: chr15:2410780-2410453 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-593
Cow position: chr15:7940347-7940680 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 227
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 163, 13

Conread position: 262-593
Cow position: chr15:8059906-8060227 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 11

Conread position: 262-593
Cow position: chr15:8358579-8358909 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 17

Conread position: 262-593
Cow position: chr15:13679319-13679638 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 233
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 182, 17

Conread position: 262-593
Cow position: chr15:16788860-16788530 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 226
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 88, 13

Conread position: 262-593
Cow position: chr15:21534206-21533881 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 17

Conread position: 262-593
Cow position: chr15:24287569-24287245 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 214
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 176, 17

Conread position: 262-593
Cow position: chr15:25131871-25132205 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-593
Cow position: chr15:32066333-32066005 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-593
Cow position: chr15:36623740-36623414 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 228
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 175, 17

Conread position: 262-593
Cow position: chr15:51911618-51911292 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 17

Conread position: 262-594
Cow position: chr15:7236227-7236559 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 230
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 27, 10

Conread position: 262-594
Cow position: chr15:16508781-16509117 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 230
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 194, 17

Conread position: 262-594
Cow position: chr15:33640461-33640128 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 221
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 117, 19

Conread position: 262-595
Cow position: chr15:1784251-1784586 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position: chr15:2645730-2645394 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 18

Conread position: 262-595
Cow position: chr15:3891482-3891818 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 17

Conread position: 262-595
Cow position: chr15:4948421-4948757 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position: chr15:5009718-5009384 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position: chr15:6563094-6563430 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position: chr15:6614940-6615269 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position: chr15:7262533-7262877 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 241
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position: chr15:7564920-7565254 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position: chr15:8030524-8030204 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 239
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 175, 17

Conread position: 262-595
Cow position: chr15:10825389-10825722 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 243
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 98, 17

Conread position: 262-595
Cow position: chr15:13429740-13430075 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-595
Cow position: chr15:18228981-18229317 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position: chr15:18265843-18265510 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-595
Cow position: chr15:20017561-20017226 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position: chr15:20405819-20405485 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 10

Conread position: 262-595
Cow position: chr15:25205089-25204754 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position: chr15:28488207-28487875 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 17

Conread position: 262-595
Cow position: chr15:31586480-31586145 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 17

Conread position: 262-595
Cow position: chr15:32713122-32713458 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 17

Conread position: 262-595
Cow position: chr15:33123298-33123634 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position: chr15:42944690-42944356 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 17

Conread position: 262-595
Cow position: chr15:49198346-49198688 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-596
Cow position: chr15:2014423-2014753 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 233
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 164, 17

Conread position: 262-596
Cow position: chr15:43739342-43739007 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-600
Cow position: chr15:9431851-9432187 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 24

Conread position: 262-600
Cow position: chr15:16189853-16189514 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 264-595
Cow position: chr15:8967568-8967224 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 240
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 84, 15

Conread position: 265-441
Cow position: chr15:24719150-24719326 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 14

Conread position: 265-487
Cow position: chr15:28432991-28433217 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 158, 14

Conread position: 265-499
Cow position: chr15:53575719-53575479 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 166
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 123, 7

Conread position: 265-555
Cow position: chr15:50252481-50252765 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 201
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 75, 14

Conread position: 265-561
Cow position: chr15:502006-502314 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 210
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 95, 14

Conread position: 265-572
Cow position: chr15:21914057-21913754 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 218
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 142, 14

Conread position: 265-576
Cow position: chr15:37472639-37472335 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 218
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 92, 14

Conread position: 265-589
Cow position: chr15:53323042-53323361 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 14

Conread position: 265-590
Cow position: chr15:480502-480827 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 14

Conread position: 265-590
Cow position: chr15:40063116-40063435 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 228
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 160, 14

Conread position: 265-591
Cow position: chr15:7964033-7963711 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 228
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 168, 14

Conread position: 265-591
Cow position: chr15:44072387-44072695 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 231
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 315, 14

Conread position: 265-592
Cow position: chr15:3259119-3258796 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 222
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 155, 14

Conread position: 265-592
Cow position: chr15:21663822-21663494 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 14

Conread position: 265-592
Cow position: chr15:35737717-35738028 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 223
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 157, 14

Conread position: 265-593
Cow position: chr15:334360-334684 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 221
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 74, 8

Conread position: 265-593
Cow position: chr15:8101374-8101707 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 14

Conread position: 265-593
Cow position: chr15:9911376-9911039 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 229
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 155, 14

Conread position: 265-593
Cow position: chr15:17397652-17397973 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 14

Conread position: 265-593
Cow position: chr15:49605788-49606100 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 216
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 154, 14

Conread position: 265-593
Cow position: chr15:51219661-51219991 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 14

Conread position: 265-594
Cow position: chr15:35273066-35273389 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 217
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 53, 8

Conread position: 265-595
Cow position: chr15:3776461-3776135 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 224
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 50, 14

Conread position: 265-595
Cow position: chr15:6382229-6381901 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 243
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 155, 14

Conread position: 265-595
Cow position: chr15:9394885-9395214 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 14

Conread position: 265-595
Cow position: chr15:17075500-17075168 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 8

Conread position: 265-595
Cow position: chr15:27635347-27635680 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 14

Conread position: 265-595
Cow position: chr15:36330538-36330207 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 14

Conread position: 265-595
Cow position: chr15:37459806-37460141 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 229
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 116, 14

Conread position: 265-596
Cow position: chr15:35751375-35751042 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 67

Conread position: 265-600
Cow position: chr15:5939742-5939411 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 14

Conread position: 265-600
Cow position: chr15:6080630-6080962 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 240
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 92, 14

Conread position: 266-561
Cow position: chr15:29342119-29341836 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 154, 13

Conread position: 266-580
Cow position: chr15:38982571-38982887 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 217
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 115, 13

Conread position: 266-582
Cow position: chr15:31363386-31363704 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 13

Conread position: 266-591
Cow position: chr15:2806953-2806629 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 229
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 156, 13

Conread position: 266-592
Cow position: chr15:6154009-6153682 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 13

Conread position: 266-593
Cow position: chr15:7930491-7930818 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 235
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 147, 13

Conread position: 266-593
Cow position: chr15:20456976-20457302 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 13

Conread position: 266-593
Cow position: chr15:43293246-43292926 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 229
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 154, 13

Conread position: 267-487
Cow position: chr15:3722108-3721889 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 153, 12

Conread position: 267-590
Cow position: chr15:6804477-6804812 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 237
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 101, 12

Conread position: 268-592
Cow position: chr15:4673167-4673494 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 229
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 154, 13

Conread position: 268-593
Cow position: chr15:6280552-6280877 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 224
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 130, 63

Conread position: 268-595
Cow position: chr15:48008332-48008668 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 215
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 153, 13

Conread position: 270-593
Cow position: chr15:4221208-4220883 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 35

Conread position: 272-582
Cow position: chr15:3753656-3753962 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 210
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 115, 93

Conread position: 273-595
Cow position: chr15:36357155-36356836 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 94

Conread position: 276-420
Cow position: chr15:39447626-39447483 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 119

Conread position: 276-441
Cow position: chr15:21965935-21966095 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 276-486
Cow position: chr15:9736972-9736766 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 144, 64

Conread position: 276-510
Cow position: chr15:21635807-21635576 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 170
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 161, 5

Conread position: 276-587
Cow position: chr15:33626218-33625907 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 228
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 62, 112

Conread position: 276-592
Cow position: chr15:7672180-7671871 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 218
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 79, 172

Conread position: 276-592
Cow position: chr15:47774194-47774519 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 230
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 143, 106

Conread position: 276-600
Cow position: chr15:3789606-3789915 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 220
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 147, 17

Conread position: 277-554
Cow position: chr15:10799731-10799995 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 193
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 169, 131

Conread position: 277-592
Cow position: chr15:43386-43703 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 216
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 71, 101

Conread position: 277-592
Cow position: chr15:7270276-7270590 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 75

Conread position: 277-592
Cow position: chr15:31847494-31847812 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 217
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 131, 238

Conread position: 277-592
Cow position: chr15:42938840-42939159 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 173

Conread position: 277-593
Cow position: chr15:610312-609991 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 213
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 130, 91

Conread position: 277-593
Cow position: chr15:7546814-7547126 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 225
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 149, 100

Conread position: 277-593
Cow position: chr15:7552555-7552871 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 217
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 149, 57

Conread position: 278-564
Cow position: chr15:24042192-24042484 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 205
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 44, 94

Conread position: 278-571
Cow position: chr15:8410972-8411262 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 206
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 160, 246

Conread position: 278-587
Cow position: chr15:38821696-38821387 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 200
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 89, 40

Conread position: 278-592
Cow position: chr15:6384622-6384307 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 216
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 80, 87

Conread position: 278-592
Cow position: chr15:37630951-37631268 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 220
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 16, 313

Conread position: 279-593
Cow position: chr15:6038822-6039154 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 233
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 30, 279

Conread position: 280-593
Cow position: chr15:38678027-38678338 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 213
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 143, 38

Conread position: 280-595
Cow position: chr15:25046743-25047058 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 230
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 127, 97

Conread position: 280-595
Cow position: chr15:32844841-32844531 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 68

Conread position: 283-593
Cow position: chr15:6119348-6119660 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 222
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 15, 83

Conread position: 285-593
Cow position: chr15:5982587-5982894 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 218
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 137, 75

Conread position: 285-593
Cow position: chr15:13389415-13389120 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 210
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 138, 70

Conread position: 285-594
Cow position: chr15:36941451-36941136 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 224
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 39, 104

Conread position: 285-595
Cow position: chr15:53185116-53185416 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 217
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 114, 85

Conread position: 286-593
Cow position: chr15:14755947-14756248 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 48

Conread position: 287-590
Cow position: chr15:7509176-7508885 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 209
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 22, 77

Conread position: 287-595
Cow position: chr15:280596-280268 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 219
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 135, 0

Conread position: 288-510
Cow position: chr15:12952211-12952424 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 151
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 288-592
Cow position: chr15:6487397-6487709 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 203
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 92

Conread position: 290-592
Cow position: chr15:32702780-32702490 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 213
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 148, 41

Conread position: 291-591
Cow position: chr15:17294958-17295259 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 177
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 132, 69

Conread position: 291-595
Cow position: chr15:45707169-45707463 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 207
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 130, 43

Conread position: 293-592
Cow position: chr15:17035701-17035408 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 196
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 133, 17

Conread position: 294-598
Cow position: chr15:6460815-6461104 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 207
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 41, 116

Conread position: 303-472
Cow position: chr15:11292069-11291898 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 119, 37

Conread position: 307-592
Cow position: chr15:6066548-6066265 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 186
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 101, 39

Conread position: 307-595
Cow position: chr15:20354518-20354227 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 197
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 101, 257

Conread position: 308-596
Cow position: chr15:705630-705347 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 205
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 112, 23

Conread position: 310-595
Cow position: chr15:4198973-4199260 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 203
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 116, 42

Conread position: 311-471
Cow position: chr15:49449219-49449059 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 116, 77

Conread position: 311-530
Cow position: chr15:8929773-8929551 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 109, 0

Conread position: 311-595
Cow position: chr15:52976920-52977208 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 322-595
Cow position: chr15:9100038-9100313 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 194
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 22, 135

Conread position: 335-595
Cow position: chr15:443796-443536 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 178
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 91, 57

Conread position: 348-595
Cow position: chr15:22456007-22455755 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 170
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 106

Conread position: 349-595
Cow position: chr15:3837460-3837210 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 182
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 77, 0

Conread position: 351-593
Cow position: chr15:23559664-23559899 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 192, 72

Conread position: 359-588
Cow position: chr15:6330042-6330266 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 221, 88

Conread position: 365-595
Cow position: chr15:22433340-22433562 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 64, 17

Conread position: 365-595
Cow position: chr15:31270853-31270620 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 170
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 43, 55

Conread position: 365-600
Cow position: chr15:22733334-22733100 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 57, 163

Conread position: 371-595
Cow position: chr15:2663411-2663639 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 55, 0

Conread position: 371-595
Cow position: chr15:22540795-22540567 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 156
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 375-595
Cow position: chr15:4081034-4081257 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 51, 10

Conread position: 397-595
Cow position: chr15:52208591-52208792 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 29, 104

Conread position: 403-595
Cow position: chr15:25070437-25070243 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 23, 110

Conread position: 417-595
Cow position: chr15:17682182-17682001 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 5, 130

Conread position: 425-587
Cow position: chr15:313715-313552 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 131

Conread position: 425-591
Cow position: chr15:2617977-2617808 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 428-592
Cow position: chr15:21840203-21840366 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 433-593
Cow position: chr15:13546958-13546796 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 137, 14

Conread position: 437-590
Cow position: chr15:4924257-4924411 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 143, 0

Conread position: 438-595
Cow position: chr15:3792802-3792644 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 139, 0

Conread position: 438-595
Cow position: chr15:25331524-25331678 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 142, 98

Conread position: 452-595
Cow position: chr15:11269110-11269254 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 125, 0

Conread position: 475-596
Cow position: chr15:49449010-49448888 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 105, 0

Show alignments to all cow chromosomes.