Cow genome map

Conread name: Ss1.1-rlin03_j17.5

Conread position: 261-555
Cow position:
Alignm length: 311
Alignm identity: 212
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 156, 19

Conread position: 261-593
Cow position:
Alignm length: 337
Alignm identity: 234
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 162, 18

Conread position: 262-406
Cow position:
Alignm length: 145
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 262-413
Cow position:
Alignm length: 152
Alignm identity: 117
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 262-421
Cow position:
Alignm length: 160
Alignm identity: 117
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 262-476
Cow position:
Alignm length: 218
Alignm identity: 158
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 158, 17

Conread position: 262-505
Cow position:
Alignm length: 250
Alignm identity: 169
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 158, 17

Conread position: 262-551
Cow position:
Alignm length: 293
Alignm identity: 205
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 164, 17

Conread position: 262-553
Cow position:
Alignm length: 295
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-559
Cow position:
Alignm length: 300
Alignm identity: 206
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 158, 17

Conread position: 262-564
Cow position:
Alignm length: 307
Alignm identity: 206
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 147, 17

Conread position: 262-568
Cow position:
Alignm length: 313
Alignm identity: 211
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 177, 17

Conread position: 262-579
Cow position:
Alignm length: 322
Alignm identity: 214
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 161, 17

Conread position: 262-585
Cow position:
Alignm length: 327
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 17

Conread position: 262-590
Cow position:
Alignm length: 330
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 17

Conread position: 262-591
Cow position:
Alignm length: 334
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-592
Cow position:
Alignm length: 337
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 17

Conread position: 262-592
Cow position:
Alignm length: 336
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 17

Conread position: 262-592
Cow position:
Alignm length: 342
Alignm identity: 223
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 113, 17

Conread position: 262-592
Cow position:
Alignm length: 343
Alignm identity: 238
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 86, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 98

Conread position: 262-592
Cow position:
Alignm length: 340
Alignm identity: 237
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 78, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 231
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 124, 17

Conread position: 262-592
Cow position:
Alignm length: 333
Alignm identity: 224
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 164, 17

Conread position: 262-592
Cow position:
Alignm length: 336
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 17

Conread position: 262-593
Cow position:
Alignm length: 340
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 10

Conread position: 262-593
Cow position:
Alignm length: 338
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 18

Conread position: 262-593
Cow position:
Alignm length: 334
Alignm identity: 232
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 81, 23

Conread position: 262-593
Cow position:
Alignm length: 336
Alignm identity: 222
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 153, 17

Conread position: 262-593
Cow position:
Alignm length: 338
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 17

Conread position: 262-593
Cow position:
Alignm length: 344
Alignm identity: 225
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 102, 17

Conread position: 262-594
Cow position:
Alignm length: 339
Alignm identity: 230
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 159, 17

Conread position: 262-594
Cow position:
Alignm length: 338
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 10

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 234
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 337
Alignm identity: 211
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 126, 17

Conread position: 262-595
Cow position:
Alignm length: 339
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 17

Conread position: 262-595
Cow position:
Alignm length: 335
Alignm identity: 235
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 315, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 337
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 18

Conread position: 262-595
Cow position:
Alignm length: 349
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 43

Conread position: 262-596
Cow position:
Alignm length: 340
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-600
Cow position:
Alignm length: 345
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 17

Conread position: 263-508
Cow position:
Alignm length: 248
Alignm identity: 180
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 159, 16

Conread position: 265-384
Cow position:
Alignm length: 121
Alignm identity: 97
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 95, 14

Conread position: 265-443
Cow position:
Alignm length: 180
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 168, 8

Conread position: 265-507
Cow position:
Alignm length: 247
Alignm identity: 165
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 162, 14

Conread position: 265-559
Cow position:
Alignm length: 297
Alignm identity: 211
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 172, 14

Conread position: 265-579
Cow position:
Alignm length: 320
Alignm identity: 216
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 161, 14

Conread position: 265-580
Cow position:
Alignm length: 320
Alignm identity: 218
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 156, 14

Conread position: 265-587
Cow position:
Alignm length: 326
Alignm identity: 225
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 151, 14

Conread position: 265-592
Cow position:
Alignm length: 333
Alignm identity: 225
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 155, 7

Conread position: 265-592
Cow position:
Alignm length: 333
Alignm identity: 237
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 161, 14

Conread position: 265-592
Cow position:
Alignm length: 345
Alignm identity: 241
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 110, 14

Conread position: 265-592
Cow position:
Alignm length: 332
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 7

Conread position: 265-593
Cow position:
Alignm length: 335
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 14

Conread position: 265-593
Cow position:
Alignm length: 334
Alignm identity: 231
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 158, 14

Conread position: 265-593
Cow position:
Alignm length: 333
Alignm identity: 226
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 158, 14

Conread position: 265-595
Cow position:
Alignm length: 336
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 14

Conread position: 265-595
Cow position:
Alignm length: 335
Alignm identity: 235
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 161, 14

Conread position: 265-600
Cow position:
Alignm length: 339
Alignm identity: 232
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 155, 7

Conread position: 266-466
Cow position:
Alignm length: 203
Alignm identity: 147
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 94, 13

Conread position: 266-510
Cow position:
Alignm length: 249
Alignm identity: 179
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 142, 13

Conread position: 266-591
Cow position:
Alignm length: 330
Alignm identity: 225
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 154, 13

Conread position: 266-592
Cow position:
Alignm length: 330
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 7

Conread position: 266-593
Cow position:
Alignm length: 332
Alignm identity: 236
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 154, 13

Conread position: 266-595
Cow position:
Alignm length: 334
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 6

Conread position: 266-595
Cow position:
Alignm length: 334
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 13

Conread position: 267-593
Cow position:
Alignm length: 334
Alignm identity: 230
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 53, 12

Conread position: 267-595
Cow position:
Alignm length: 333
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 12

Conread position: 268-591
Cow position:
Alignm length: 326
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 35

Conread position: 268-595
Cow position:
Alignm length: 333
Alignm identity: 216
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 155, 12

Conread position: 276-565
Cow position:
Alignm length: 293
Alignm identity: 208
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 144, 130

Conread position: 276-593
Cow position:
Alignm length: 322
Alignm identity: 218
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 144, 82

Conread position: 276-595
Cow position:
Alignm length: 324
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 0

Conread position: 277-466
Cow position:
Alignm length: 190
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 277-564
Cow position:
Alignm length: 289
Alignm identity: 183
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 142, 83

Conread position: 277-571
Cow position:
Alignm length: 304
Alignm identity: 205
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 28, 114

Conread position: 277-592
Cow position:
Alignm length: 320
Alignm identity: 221
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 143, 92

Conread position: 277-595
Cow position:
Alignm length: 323
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 277-600
Cow position:
Alignm length: 331
Alignm identity: 215
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 140, 83

Conread position: 278-590
Cow position:
Alignm length: 319
Alignm identity: 215
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 148, 20

Conread position: 278-593
Cow position:
Alignm length: 322
Alignm identity: 226
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 96, 62

Conread position: 278-595
Cow position:
Alignm length: 320
Alignm identity: 212
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 159, 273

Conread position: 279-593
Cow position:
Alignm length: 325
Alignm identity: 230
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 103, 41

Conread position: 280-595
Cow position:
Alignm length: 323
Alignm identity: 213
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 43, 280

Conread position: 282-421
Cow position:
Alignm length: 143
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 282-595
Cow position:
Alignm length: 315
Alignm identity: 208
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 296, 81

Conread position: 283-560
Cow position:
Alignm length: 282
Alignm identity: 188
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 61, 193

Conread position: 285-592
Cow position:
Alignm length: 312
Alignm identity: 205
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 30, 41

Conread position: 285-600
Cow position:
Alignm length: 317
Alignm identity: 214
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 296, 149

Conread position: 286-406
Cow position:
Alignm length: 121
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 286-591
Cow position:
Alignm length: 308
Alignm identity: 218
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 137, 62

Conread position: 286-593
Cow position:
Alignm length: 331
Alignm identity: 227
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 8, 0

Conread position: 286-595
Cow position:
Alignm length: 313
Alignm identity: 214
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 136, 61

Conread position: 286-597
Cow position:
Alignm length: 318
Alignm identity: 215
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 126, 188

Conread position: 297-593
Cow position:
Alignm length: 301
Alignm identity: 204
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 16, 22

Conread position: 303-592
Cow position:
Alignm length: 296
Alignm identity: 202
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 123, 68

Conread position: 312-587
Cow position:
Alignm length: 279
Alignm identity: 188
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 26, 93

Conread position: 316-590
Cow position:
Alignm length: 276
Alignm identity: 183
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 262, 9

Conread position: 318-590
Cow position:
Alignm length: 281
Alignm identity: 201
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 19, 241

Conread position: 318-593
Cow position:
Alignm length: 282
Alignm identity: 188
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 16, 62

Conread position: 318-595
Cow position:
Alignm length: 284
Alignm identity: 196
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 31, 56

Conread position: 321-546
Cow position:
Alignm length: 229
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 99, 214

Conread position: 324-595
Cow position:
Alignm length: 274
Alignm identity: 193
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 113, 41

Conread position: 335-592
Cow position:
Alignm length: 262
Alignm identity: 183
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 91, 48

Conread position: 340-593
Cow position:
Alignm length: 259
Alignm identity: 175
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 13, 0

Conread position: 343-585
Cow position:
Alignm length: 253
Alignm identity: 171
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 94, 26

Conread position: 344-511
Cow position:
Alignm length: 171
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 348-589
Cow position:
Alignm length: 244
Alignm identity: 165
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 72, 66

Conread position: 349-595
Cow position:
Alignm length: 251
Alignm identity: 183
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 74, 0

Conread position: 365-579
Cow position:
Alignm length: 223
Alignm identity: 155
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 371-592
Cow position:
Alignm length: 224
Alignm identity: 157
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 52, 77

Conread position: 409-595
Cow position:
Alignm length: 190
Alignm identity: 147
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 13, 36

Conread position: 410-593
Cow position:
Alignm length: 188
Alignm identity: 135
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 419-599
Cow position:
Alignm length: 184
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 167

Conread position: 432-595
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 107, 0

Conread position: 439-595
Cow position:
Alignm length: 158
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 146, 41

Conread position: 451-595
Cow position:
Alignm length: 147
Alignm identity: 107
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 457-596
Cow position:
Alignm length: 141
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 121, 0

Show alignments to all cow chromosomes.