Cow genome map
| Conread name: | Ss1.1-rlin03_j17.5 |
| Conread position: | 258-496 |
| Cow position: | chr18:13477335-13477564 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 37, 17 |
| Conread position: | 261-450 |
| Cow position: | chr18:4948298-4948487 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 49, 18 |
| Conread position: | 261-524 |
| Cow position: | chr18:45185206-45185469 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 19 |
| Conread position: | 261-555 |
| Cow position: | chr18:24713615-24713307 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 162, 12 |
| Conread position: | 262-392 |
| Cow position: | chr18:38023999-38023876 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 262-396 |
| Cow position: | chr18:29070803-29070936 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 98, 17 |
| Conread position: | 262-406 |
| Cow position: | chr18:37664753-37664895 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 262-453 |
| Cow position: | chr18:28767154-28767347 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-455 |
| Cow position: | chr18:47743847-47744039 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-473 |
| Cow position: | chr18:14792527-14792313 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 43, 11 |
| Conread position: | 262-502 |
| Cow position: | chr18:32656042-32656284 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-507 |
| Cow position: | chr18:23446269-23446020 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 120, 17 |
| Conread position: | 262-511 |
| Cow position: | chr18:23441478-23441224 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 157, 17 |
| Conread position: | 262-511 |
| Cow position: | chr18:25941255-25941506 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-519 |
| Cow position: | chr18:54107498-54107747 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 159, 17 |
| Conread position: | 262-541 |
| Cow position: | chr18:27538770-27539048 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 76, 17 |
| Conread position: | 262-542 |
| Cow position: | chr18:43128748-43129034 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 69, 17 |
| Conread position: | 262-566 |
| Cow position: | chr18:1046709-1047005 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-568 |
| Cow position: | chr18:29120392-29120689 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 223 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 77, 17 |
| Conread position: | 262-573 |
| Cow position: | chr18:22480862-22481161 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 86, 17 |
| Conread position: | 262-576 |
| Cow position: | chr18:51273746-51273433 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-581 |
| Cow position: | chr18:2364089-2363779 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 158, 13 |
| Conread position: | 262-582 |
| Cow position: | chr18:12994356-12994673 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 221 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 95, 17 |
| Conread position: | 262-587 |
| Cow position: | chr18:16146658-16146351 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 236, 17 |
| Conread position: | 262-590 |
| Cow position: | chr18:14128925-14128606 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 234 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 161, 17 |
| Conread position: | 262-590 |
| Cow position: | chr18:21529880-21530208 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 262-591 |
| Cow position: | chr18:4979444-4979118 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 135, 17 |
| Conread position: | 262-591 |
| Cow position: | chr18:37676884-37677211 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 231 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 161, 17 |
| Conread position: | 262-592 |
| Cow position: | chr18:14418325-14418661 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 17 |
| Conread position: | 262-592 |
| Cow position: | chr18:23702729-23702398 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 17 |
| Conread position: | 262-592 |
| Cow position: | chr18:25353603-25353933 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 262-592 |
| Cow position: | chr18:25922744-25923077 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 17 |
| Conread position: | 262-592 |
| Cow position: | chr18:28969932-28969602 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 262-592 |
| Cow position: | chr18:29864253-29863921 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-592 |
| Cow position: | chr18:36510975-36511305 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 17 |
| Conread position: | 262-592 |
| Cow position: | chr18:37508320-37508649 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-592 |
| Cow position: | chr18:38090993-38090672 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 17 |
| Conread position: | 262-592 |
| Cow position: | chr18:52655169-52655496 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 17 |
| Conread position: | 262-593 |
| Cow position: | chr18:17322759-17323088 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 13 |
| Conread position: | 262-593 |
| Cow position: | chr18:35290912-35291237 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 177, 24 |
| Conread position: | 262-593 |
| Cow position: | chr18:36775628-36775961 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-593 |
| Cow position: | chr18:52630892-52630573 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-593 |
| Cow position: | chr18:56427071-56426756 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 160, 17 |
| Conread position: | 262-594 |
| Cow position: | chr18:40158681-40159010 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 17 |
| Conread position: | 262-595 |
| Cow position: | chr18:604101-603777 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 160, 17 |
| Conread position: | 262-595 |
| Cow position: | chr18:1956817-1956481 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-595 |
| Cow position: | chr18:3755296-3755632 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-595 |
| Cow position: | chr18:11272491-11272158 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 210 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-595 |
| Cow position: | chr18:15857532-15857860 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 234 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 160, 19 |
| Conread position: | 262-595 |
| Cow position: | chr18:16080877-16081213 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-595 |
| Cow position: | chr18:16092170-16092506 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 262-595 |
| Cow position: | chr18:16464502-16464179 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 15 |
| Conread position: | 262-595 |
| Cow position: | chr18:19354715-19355049 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-595 |
| Cow position: | chr18:20691824-20691505 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 174, 17 |
| Conread position: | 262-595 |
| Cow position: | chr18:22183170-22182841 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 262-595 |
| Cow position: | chr18:28929232-28928903 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 16 |
| Conread position: | 262-595 |
| Cow position: | chr18:30762606-30762270 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-595 |
| Cow position: | chr18:32437750-32437415 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 262-595 |
| Cow position: | chr18:37491179-37491498 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 236 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 182, 17 |
| Conread position: | 262-595 |
| Cow position: | chr18:44023844-44024177 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 156, 18 |
| Conread position: | 262-595 |
| Cow position: | chr18:51344463-51344792 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 17 |
| Conread position: | 262-595 |
| Cow position: | chr18:51460486-51460158 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 237 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-595 |
| Cow position: | chr18:51696645-51696981 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 17 |
| Conread position: | 262-595 |
| Cow position: | chr18:55417079-55417412 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 262-596 |
| Cow position: | chr18:40343919-40343589 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 240 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 265-502 |
| Cow position: | chr18:9661074-9661310 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 155, 14 |
| Conread position: | 265-549 |
| Cow position: | chr18:39813274-39813005 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 265-592 |
| Cow position: | chr18:27835729-27835400 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 14 |
| Conread position: | 265-592 |
| Cow position: | chr18:36647528-36647857 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 231 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 24, 7 |
| Conread position: | 265-593 |
| Cow position: | chr18:27167984-27168320 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 233 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 137, 14 |
| Conread position: | 265-593 |
| Cow position: | chr18:32770104-32770427 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 156, 14 |
| Conread position: | 265-595 |
| Cow position: | chr18:9356521-9356190 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 14 |
| Conread position: | 265-595 |
| Cow position: | chr18:16150878-16151200 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 233 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 155, 14 |
| Conread position: | 265-595 |
| Cow position: | chr18:26244220-26243890 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 14 |
| Conread position: | 265-595 |
| Cow position: | chr18:32165570-32165245 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 14 |
| Conread position: | 265-595 |
| Cow position: | chr18:37701134-37700806 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 14 |
| Conread position: | 266-464 |
| Cow position: | chr18:14132751-14132951 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 158, 13 |
| Conread position: | 266-487 |
| Cow position: | chr18:6882860-6882639 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 160, 13 |
| Conread position: | 266-497 |
| Cow position: | chr18:19457221-19457458 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 107, 13 |
| Conread position: | 266-592 |
| Cow position: | chr18:33101682-33102004 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 15 |
| Conread position: | 267-592 |
| Cow position: | chr18:37156387-37156063 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 225 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 56, 12 |
| Conread position: | 268-595 |
| Cow position: | chr18:37559931-37560254 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 169, 11 |
| Conread position: | 268-595 |
| Cow position: | chr18:40080322-40080009 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 235 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 152, 184 |
| Conread position: | 270-596 |
| Cow position: | chr18:17095169-17095500 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 242 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 66, 150 |
| Conread position: | 271-593 |
| Cow position: | chr18:5077704-5077376 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 227 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 156, 10 |
| Conread position: | 276-458 |
| Cow position: | chr18:33987825-33988010 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 276-572 |
| Cow position: | chr18:15171246-15171541 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 144, 64 |
| Conread position: | 276-595 |
| Cow position: | chr18:35295540-35295866 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 229 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 87, 81 |
| Conread position: | 276-595 |
| Cow position: | chr18:51662514-51662837 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 110 |
| Conread position: | 277-511 |
| Cow position: | chr18:54168515-54168279 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 143, 48 |
| Conread position: | 277-591 |
| Cow position: | chr18:23801391-23801706 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 129 |
| Conread position: | 277-591 |
| Cow position: | chr18:45399535-45399840 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 228 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 81, 163 |
| Conread position: | 277-592 |
| Cow position: | chr18:51483963-51484282 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 277-593 |
| Cow position: | chr18:19269853-19270183 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 135, 87 |
| Conread position: | 277-593 |
| Cow position: | chr18:56484304-56483992 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 161, 56 |
| Conread position: | 277-596 |
| Cow position: | chr18:16870653-16870962 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 143, 57 |
| Conread position: | 278-585 |
| Cow position: | chr18:29239471-29239775 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 141, 62 |
| Conread position: | 278-587 |
| Cow position: | chr18:6459243-6459552 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 145, 12 |
| Conread position: | 278-592 |
| Cow position: | chr18:5535361-5535673 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 257 |
| Conread position: | 278-592 |
| Cow position: | chr18:35798497-35798187 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 67, 143 |
| Conread position: | 278-594 |
| Cow position: | chr18:16360613-16360301 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 35 |
| Conread position: | 279-591 |
| Cow position: | chr18:33144028-33144338 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 220 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 82, 88 |
| Conread position: | 279-593 |
| Cow position: | chr18:55056456-55056760 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 51, 98 |
| Conread position: | 280-587 |
| Cow position: | chr18:16558075-16558382 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 15 |
| Conread position: | 280-591 |
| Cow position: | chr18:14814610-14814917 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 143, 45 |
| Conread position: | 280-595 |
| Cow position: | chr18:16363937-16363628 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 64, 86 |
| Conread position: | 281-484 |
| Cow position: | chr18:17999082-17998872 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 281-492 |
| Cow position: | chr18:54272801-54273012 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 8, 59 |
| Conread position: | 281-591 |
| Cow position: | chr18:18476428-18476117 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 76, 85 |
| Conread position: | 282-594 |
| Cow position: | chr18:26747743-26748051 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 31, 8 |
| Conread position: | 283-527 |
| Cow position: | chr18:21182867-21182619 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 83, 179 |
| Conread position: | 283-600 |
| Cow position: | chr18:55649164-55649460 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 155, 57 |
| Conread position: | 284-592 |
| Cow position: | chr18:44181601-44181301 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 136, 43 |
| Conread position: | 286-571 |
| Cow position: | chr18:29222748-29223030 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 141, 31 |
| Conread position: | 289-587 |
| Cow position: | chr18:32725915-32725626 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 71, 78 |
| Conread position: | 289-595 |
| Cow position: | chr18:33344505-33344806 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 66 |
| Conread position: | 290-592 |
| Cow position: | chr18:54032089-54032395 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 293-571 |
| Cow position: | chr18:6369141-6369412 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 130, 70 |
| Conread position: | 293-592 |
| Cow position: | chr18:38160476-38160174 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 8 |
| Conread position: | 296-595 |
| Cow position: | chr18:5201911-5202214 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 45 |
| Conread position: | 298-595 |
| Cow position: | chr18:18215895-18216196 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 303-592 |
| Cow position: | chr18:16174212-16173926 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 213 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 123, 57 |
| Conread position: | 311-589 |
| Cow position: | chr18:28083454-28083736 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 204 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 56, 85 |
| Conread position: | 312-594 |
| Cow position: | chr18:48390351-48390631 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 108, 64 |
| Conread position: | 318-595 |
| Cow position: | chr18:35274559-35274835 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 42, 36 |
| Conread position: | 318-595 |
| Cow position: | chr18:44403228-44403511 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 324-595 |
| Cow position: | chr18:35372431-35372161 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 92, 10 |
| Conread position: | 333-596 |
| Cow position: | chr18:28674847-28674590 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 87, 82 |
| Conread position: | 344-592 |
| Cow position: | chr18:18853633-18853885 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 83, 68 |
| Conread position: | 345-600 |
| Cow position: | chr18:10221464-10221722 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 75, 182 |
| Conread position: | 365-588 |
| Cow position: | chr18:38606277-38606489 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 58, 17 |
| Conread position: | 371-595 |
| Cow position: | chr18:24618890-24619114 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 55, 168 |
| Conread position: | 373-593 |
| Cow position: | chr18:17671465-17671246 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 65, 10 |
| Conread position: | 414-595 |
| Cow position: | chr18:29070931-29071115 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 418-595 |
| Cow position: | chr18:34015268-34015448 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 425-593 |
| Cow position: | chr18:25993772-25993935 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 155, 26 |
| Conread position: | 435-593 |
| Cow position: | chr18:14800346-14800501 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 145, 78 |
| Conread position: | 438-595 |
| Cow position: | chr18:47744280-47744438 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 455-592 |
| Cow position: | chr18:969238-969378 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 102, 0 |
Show alignments to all cow chromosomes.