Cow genome map

Conread name: Ss1.1-rlin03_j17.5

Conread position: 258-496
Cow position:
Alignm length: 241
Alignm identity: 165
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 37, 17

Conread position: 261-450
Cow position:
Alignm length: 194
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 18

Conread position: 261-524
Cow position:
Alignm length: 266
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 19

Conread position: 261-555
Cow position:
Alignm length: 311
Alignm identity: 190
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 162, 12

Conread position: 262-392
Cow position:
Alignm length: 131
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 262-396
Cow position:
Alignm length: 136
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 98, 17

Conread position: 262-406
Cow position:
Alignm length: 145
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 262-453
Cow position:
Alignm length: 195
Alignm identity: 142
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 158, 17

Conread position: 262-455
Cow position:
Alignm length: 195
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 158, 17

Conread position: 262-473
Cow position:
Alignm length: 216
Alignm identity: 152
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 11

Conread position: 262-502
Cow position:
Alignm length: 244
Alignm identity: 175
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 158, 17

Conread position: 262-507
Cow position:
Alignm length: 251
Alignm identity: 170
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 120, 17

Conread position: 262-511
Cow position:
Alignm length: 258
Alignm identity: 182
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 157, 17

Conread position: 262-511
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 158, 17

Conread position: 262-519
Cow position:
Alignm length: 260
Alignm identity: 187
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 159, 17

Conread position: 262-541
Cow position:
Alignm length: 283
Alignm identity: 197
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 76, 17

Conread position: 262-542
Cow position:
Alignm length: 295
Alignm identity: 204
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 69, 17

Conread position: 262-566
Cow position:
Alignm length: 306
Alignm identity: 202
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 158, 17

Conread position: 262-568
Cow position:
Alignm length: 311
Alignm identity: 223
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 77, 17

Conread position: 262-573
Cow position:
Alignm length: 314
Alignm identity: 202
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 86, 17

Conread position: 262-576
Cow position:
Alignm length: 321
Alignm identity: 221
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 158, 17

Conread position: 262-581
Cow position:
Alignm length: 321
Alignm identity: 212
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 158, 13

Conread position: 262-582
Cow position:
Alignm length: 323
Alignm identity: 221
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 95, 17

Conread position: 262-587
Cow position:
Alignm length: 328
Alignm identity: 226
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 236, 17

Conread position: 262-590
Cow position:
Alignm length: 332
Alignm identity: 234
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 161, 17

Conread position: 262-590
Cow position:
Alignm length: 333
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-591
Cow position:
Alignm length: 337
Alignm identity: 226
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 135, 17

Conread position: 262-591
Cow position:
Alignm length: 334
Alignm identity: 231
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 161, 17

Conread position: 262-592
Cow position:
Alignm length: 338
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 17

Conread position: 262-592
Cow position:
Alignm length: 336
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-592
Cow position:
Alignm length: 336
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 17

Conread position: 262-592
Cow position:
Alignm length: 333
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-592
Cow position:
Alignm length: 336
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 17

Conread position: 262-592
Cow position:
Alignm length: 334
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 17

Conread position: 262-593
Cow position:
Alignm length: 336
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 13

Conread position: 262-593
Cow position:
Alignm length: 339
Alignm identity: 222
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 177, 24

Conread position: 262-593
Cow position:
Alignm length: 336
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-593
Cow position:
Alignm length: 336
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-593
Cow position:
Alignm length: 336
Alignm identity: 223
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 160, 17

Conread position: 262-594
Cow position:
Alignm length: 337
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 240
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 160, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 340
Alignm identity: 210
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 339
Alignm identity: 234
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 160, 19

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 15

Conread position: 262-595
Cow position:
Alignm length: 340
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 222
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 174, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-595
Cow position:
Alignm length: 339
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 16

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 337
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-595
Cow position:
Alignm length: 336
Alignm identity: 236
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 182, 17

Conread position: 262-595
Cow position:
Alignm length: 340
Alignm identity: 221
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 156, 18

Conread position: 262-595
Cow position:
Alignm length: 339
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 17

Conread position: 262-595
Cow position:
Alignm length: 339
Alignm identity: 237
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 340
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-596
Cow position:
Alignm length: 341
Alignm identity: 240
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 158, 17

Conread position: 265-502
Cow position:
Alignm length: 241
Alignm identity: 173
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 155, 14

Conread position: 265-549
Cow position:
Alignm length: 285
Alignm identity: 191
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 265-592
Cow position:
Alignm length: 333
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 14

Conread position: 265-592
Cow position:
Alignm length: 333
Alignm identity: 231
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 24, 7

Conread position: 265-593
Cow position:
Alignm length: 338
Alignm identity: 233
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 137, 14

Conread position: 265-593
Cow position:
Alignm length: 334
Alignm identity: 227
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 156, 14

Conread position: 265-595
Cow position:
Alignm length: 336
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 14

Conread position: 265-595
Cow position:
Alignm length: 335
Alignm identity: 233
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 155, 14

Conread position: 265-595
Cow position:
Alignm length: 335
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 14

Conread position: 265-595
Cow position:
Alignm length: 336
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 14

Conread position: 265-595
Cow position:
Alignm length: 335
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 14

Conread position: 266-464
Cow position:
Alignm length: 202
Alignm identity: 141
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 158, 13

Conread position: 266-487
Cow position:
Alignm length: 224
Alignm identity: 149
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 160, 13

Conread position: 266-497
Cow position:
Alignm length: 240
Alignm identity: 173
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 107, 13

Conread position: 266-592
Cow position:
Alignm length: 330
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 15

Conread position: 267-592
Cow position:
Alignm length: 336
Alignm identity: 225
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 56, 12

Conread position: 268-595
Cow position:
Alignm length: 333
Alignm identity: 218
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 169, 11

Conread position: 268-595
Cow position:
Alignm length: 330
Alignm identity: 235
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 152, 184

Conread position: 270-596
Cow position:
Alignm length: 340
Alignm identity: 242
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 66, 150

Conread position: 271-593
Cow position:
Alignm length: 333
Alignm identity: 227
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 156, 10

Conread position: 276-458
Cow position:
Alignm length: 186
Alignm identity: 135
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 144, 0

Conread position: 276-572
Cow position:
Alignm length: 302
Alignm identity: 203
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 144, 64

Conread position: 276-595
Cow position:
Alignm length: 329
Alignm identity: 229
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 87, 81

Conread position: 276-595
Cow position:
Alignm length: 325
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 110

Conread position: 277-511
Cow position:
Alignm length: 238
Alignm identity: 169
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 143, 48

Conread position: 277-591
Cow position:
Alignm length: 318
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 129

Conread position: 277-591
Cow position:
Alignm length: 319
Alignm identity: 228
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 81, 163

Conread position: 277-592
Cow position:
Alignm length: 320
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 0

Conread position: 277-593
Cow position:
Alignm length: 335
Alignm identity: 220
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 135, 87

Conread position: 277-593
Cow position:
Alignm length: 320
Alignm identity: 209
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 161, 56

Conread position: 277-596
Cow position:
Alignm length: 324
Alignm identity: 191
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 143, 57

Conread position: 278-585
Cow position:
Alignm length: 312
Alignm identity: 211
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 141, 62

Conread position: 278-587
Cow position:
Alignm length: 319
Alignm identity: 209
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 145, 12

Conread position: 278-592
Cow position:
Alignm length: 319
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 257

Conread position: 278-592
Cow position:
Alignm length: 321
Alignm identity: 210
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 67, 143

Conread position: 278-594
Cow position:
Alignm length: 319
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 35

Conread position: 279-591
Cow position:
Alignm length: 319
Alignm identity: 220
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 82, 88

Conread position: 279-593
Cow position:
Alignm length: 323
Alignm identity: 225
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 51, 98

Conread position: 280-587
Cow position:
Alignm length: 312
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 15

Conread position: 280-591
Cow position:
Alignm length: 314
Alignm identity: 211
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 143, 45

Conread position: 280-595
Cow position:
Alignm length: 320
Alignm identity: 212
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 64, 86

Conread position: 281-484
Cow position:
Alignm length: 211
Alignm identity: 150
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 139, 0

Conread position: 281-492
Cow position:
Alignm length: 216
Alignm identity: 158
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 8, 59

Conread position: 281-591
Cow position:
Alignm length: 316
Alignm identity: 215
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 76, 85

Conread position: 282-594
Cow position:
Alignm length: 316
Alignm identity: 206
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 8

Conread position: 283-527
Cow position:
Alignm length: 255
Alignm identity: 178
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 83, 179

Conread position: 283-600
Cow position:
Alignm length: 320
Alignm identity: 221
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 155, 57

Conread position: 284-592
Cow position:
Alignm length: 313
Alignm identity: 219
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 136, 43

Conread position: 286-571
Cow position:
Alignm length: 291
Alignm identity: 200
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 141, 31

Conread position: 289-587
Cow position:
Alignm length: 302
Alignm identity: 211
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 71, 78

Conread position: 289-595
Cow position:
Alignm length: 309
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 66

Conread position: 290-592
Cow position:
Alignm length: 307
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 293-571
Cow position:
Alignm length: 280
Alignm identity: 189
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 130, 70

Conread position: 293-592
Cow position:
Alignm length: 304
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 8

Conread position: 296-595
Cow position:
Alignm length: 305
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 45

Conread position: 298-595
Cow position:
Alignm length: 302
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 303-592
Cow position:
Alignm length: 294
Alignm identity: 213
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 123, 57

Conread position: 311-589
Cow position:
Alignm length: 284
Alignm identity: 204
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 56, 85

Conread position: 312-594
Cow position:
Alignm length: 291
Alignm identity: 206
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 108, 64

Conread position: 318-595
Cow position:
Alignm length: 284
Alignm identity: 193
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 42, 36

Conread position: 318-595
Cow position:
Alignm length: 284
Alignm identity: 196
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 87, 0

Conread position: 324-595
Cow position:
Alignm length: 277
Alignm identity: 195
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 92, 10

Conread position: 333-596
Cow position:
Alignm length: 266
Alignm identity: 177
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 87, 82

Conread position: 344-592
Cow position:
Alignm length: 257
Alignm identity: 179
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 83, 68

Conread position: 345-600
Cow position:
Alignm length: 260
Alignm identity: 182
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 75, 182

Conread position: 365-588
Cow position:
Alignm length: 226
Alignm identity: 162
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 58, 17

Conread position: 371-595
Cow position:
Alignm length: 229
Alignm identity: 159
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 55, 168

Conread position: 373-593
Cow position:
Alignm length: 223
Alignm identity: 160
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 65, 10

Conread position: 414-595
Cow position:
Alignm length: 185
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 418-595
Cow position:
Alignm length: 181
Alignm identity: 131
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 425-593
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 155, 26

Conread position: 435-593
Cow position:
Alignm length: 160
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 145, 78

Conread position: 438-595
Cow position:
Alignm length: 159
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 132, 0

Conread position: 455-592
Cow position:
Alignm length: 141
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 102, 0

Show alignments to all cow chromosomes.