Cow genome map

Conread name: Ss1.1-rlin03_j17.5

Conread position: 254-573
Cow position:
Alignm length: 323
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 9

Conread position: 258-441
Cow position:
Alignm length: 186
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 162, 21

Conread position: 261-587
Cow position:
Alignm length: 332
Alignm identity: 232
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 118, 18

Conread position: 261-592
Cow position:
Alignm length: 336
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 18

Conread position: 262-413
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 262-561
Cow position:
Alignm length: 303
Alignm identity: 213
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 164, 17

Conread position: 262-572
Cow position:
Alignm length: 318
Alignm identity: 215
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 158, 17

Conread position: 262-582
Cow position:
Alignm length: 334
Alignm identity: 225
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 82, 17

Conread position: 262-585
Cow position:
Alignm length: 325
Alignm identity: 222
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 165, 13

Conread position: 262-590
Cow position:
Alignm length: 333
Alignm identity: 216
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 174, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-592
Cow position:
Alignm length: 336
Alignm identity: 232
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 161, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 17

Conread position: 262-593
Cow position:
Alignm length: 334
Alignm identity: 230
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 177, 18

Conread position: 262-593
Cow position:
Alignm length: 336
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-593
Cow position:
Alignm length: 335
Alignm identity: 230
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 158, 17

Conread position: 262-593
Cow position:
Alignm length: 336
Alignm identity: 228
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 160, 17

Conread position: 262-593
Cow position:
Alignm length: 338
Alignm identity: 225
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 40, 18

Conread position: 262-593
Cow position:
Alignm length: 336
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 17

Conread position: 262-593
Cow position:
Alignm length: 336
Alignm identity: 222
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 158, 17

Conread position: 262-594
Cow position:
Alignm length: 337
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 17

Conread position: 262-594
Cow position:
Alignm length: 339
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-595
Cow position:
Alignm length: 349
Alignm identity: 240
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 339
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 339
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 10

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 339
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 339
Alignm identity: 230
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 25, 17

Conread position: 262-595
Cow position:
Alignm length: 341
Alignm identity: 240
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 116, 17

Conread position: 262-595
Cow position:
Alignm length: 339
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-595
Cow position:
Alignm length: 336
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 17

Conread position: 262-596
Cow position:
Alignm length: 343
Alignm identity: 236
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 158, 17

Conread position: 262-596
Cow position:
Alignm length: 340
Alignm identity: 234
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 161, 17

Conread position: 262-596
Cow position:
Alignm length: 337
Alignm identity: 234
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 164, 18

Conread position: 263-595
Cow position:
Alignm length: 342
Alignm identity: 232
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 38, 5

Conread position: 265-378
Cow position:
Alignm length: 114
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 265-589
Cow position:
Alignm length: 330
Alignm identity: 225
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 143, 14

Conread position: 265-590
Cow position:
Alignm length: 334
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 14

Conread position: 265-592
Cow position:
Alignm length: 333
Alignm identity: 213
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 154, 14

Conread position: 265-592
Cow position:
Alignm length: 333
Alignm identity: 224
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 155, 14

Conread position: 265-593
Cow position:
Alignm length: 332
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 14

Conread position: 265-593
Cow position:
Alignm length: 337
Alignm identity: 232
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 84, 14

Conread position: 265-593
Cow position:
Alignm length: 333
Alignm identity: 226
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 155, 14

Conread position: 265-593
Cow position:
Alignm length: 335
Alignm identity: 221
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 45, 14

Conread position: 265-594
Cow position:
Alignm length: 337
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 14

Conread position: 265-595
Cow position:
Alignm length: 336
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 14

Conread position: 265-595
Cow position:
Alignm length: 336
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 14

Conread position: 265-595
Cow position:
Alignm length: 335
Alignm identity: 228
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 160, 14

Conread position: 265-596
Cow position:
Alignm length: 336
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 14

Conread position: 266-497
Cow position:
Alignm length: 235
Alignm identity: 162
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 154, 13

Conread position: 266-500
Cow position:
Alignm length: 238
Alignm identity: 167
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 154, 6

Conread position: 266-591
Cow position:
Alignm length: 332
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 13

Conread position: 266-593
Cow position:
Alignm length: 333
Alignm identity: 220
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 52, 13

Conread position: 266-594
Cow position:
Alignm length: 330
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 13

Conread position: 266-595
Cow position:
Alignm length: 331
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 13

Conread position: 267-582
Cow position:
Alignm length: 318
Alignm identity: 213
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 168, 8

Conread position: 267-587
Cow position:
Alignm length: 321
Alignm identity: 215
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 12, 0

Conread position: 271-595
Cow position:
Alignm length: 327
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 76

Conread position: 276-487
Cow position:
Alignm length: 212
Alignm identity: 145
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 132, 0

Conread position: 276-593
Cow position:
Alignm length: 320
Alignm identity: 225
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 75, 144

Conread position: 276-593
Cow position:
Alignm length: 320
Alignm identity: 219
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 159, 51

Conread position: 276-595
Cow position:
Alignm length: 334
Alignm identity: 237
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 138, 19

Conread position: 277-555
Cow position:
Alignm length: 282
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 277-592
Cow position:
Alignm length: 320
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 277-592
Cow position:
Alignm length: 320
Alignm identity: 222
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 149, 107

Conread position: 277-593
Cow position:
Alignm length: 320
Alignm identity: 215
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 146, 48

Conread position: 277-593
Cow position:
Alignm length: 318
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 63

Conread position: 277-593
Cow position:
Alignm length: 321
Alignm identity: 225
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 161, 54

Conread position: 278-459
Cow position:
Alignm length: 184
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 142, 59

Conread position: 278-481
Cow position:
Alignm length: 209
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 142, 67

Conread position: 278-520
Cow position:
Alignm length: 246
Alignm identity: 179
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 142, 97

Conread position: 278-592
Cow position:
Alignm length: 319
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 82

Conread position: 280-592
Cow position:
Alignm length: 320
Alignm identity: 213
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 92, 52

Conread position: 281-511
Cow position:
Alignm length: 237
Alignm identity: 157
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 22, 218

Conread position: 281-588
Cow position:
Alignm length: 308
Alignm identity: 197
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 163, 0

Conread position: 283-592
Cow position:
Alignm length: 321
Alignm identity: 220
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 143, 52

Conread position: 283-600
Cow position:
Alignm length: 322
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 57

Conread position: 285-600
Cow position:
Alignm length: 321
Alignm identity: 225
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 73, 81

Conread position: 286-589
Cow position:
Alignm length: 311
Alignm identity: 211
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 140, 46

Conread position: 287-595
Cow position:
Alignm length: 326
Alignm identity: 211
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 61, 301

Conread position: 288-590
Cow position:
Alignm length: 307
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 247

Conread position: 288-590
Cow position:
Alignm length: 307
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 247

Conread position: 288-596
Cow position:
Alignm length: 317
Alignm identity: 221
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 103, 5

Conread position: 289-595
Cow position:
Alignm length: 314
Alignm identity: 207
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 137, 82

Conread position: 293-595
Cow position:
Alignm length: 306
Alignm identity: 209
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 155, 77

Conread position: 304-595
Cow position:
Alignm length: 297
Alignm identity: 206
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 122, 25

Conread position: 313-594
Cow position:
Alignm length: 285
Alignm identity: 195
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 26, 58

Conread position: 316-595
Cow position:
Alignm length: 283
Alignm identity: 191
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 107, 24

Conread position: 333-579
Cow position:
Alignm length: 250
Alignm identity: 175
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 45, 0

Conread position: 340-595
Cow position:
Alignm length: 260
Alignm identity: 187
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 86, 0

Conread position: 341-593
Cow position:
Alignm length: 259
Alignm identity: 177
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 82, 29

Conread position: 341-595
Cow position:
Alignm length: 255
Alignm identity: 173
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 101, 0

Conread position: 345-572
Cow position:
Alignm length: 240
Alignm identity: 165
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 15, 26

Conread position: 369-589
Cow position:
Alignm length: 224
Alignm identity: 153
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 370-595
Cow position:
Alignm length: 230
Alignm identity: 164
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 56, 0

Conread position: 372-593
Cow position:
Alignm length: 225
Alignm identity: 157
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 72, 11

Conread position: 406-592
Cow position:
Alignm length: 190
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 41, 13

Conread position: 409-586
Cow position:
Alignm length: 182
Alignm identity: 128
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 438-595
Cow position:
Alignm length: 159
Alignm identity: 114
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 139, 0

Conread position: 438-595
Cow position:
Alignm length: 159
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 132, 0

Conread position: 438-595
Cow position:
Alignm length: 159
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 142, 0

Conread position: 451-595
Cow position:
Alignm length: 146
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 129, 0

Show alignments to all cow chromosomes.