Cow genome map

Conread name: Ss1.1-rlin03_j17.5

Conread position: 261-582
Cow position:
Alignm length: 325
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 18

Conread position: 261-584
Cow position:
Alignm length: 330
Alignm identity: 224
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 157, 18

Conread position: 262-406
Cow position:
Alignm length: 145
Alignm identity: 105
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 262-413
Cow position:
Alignm length: 152
Alignm identity: 115
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 262-421
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 108, 17

Conread position: 262-441
Cow position:
Alignm length: 181
Alignm identity: 127
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 158, 17

Conread position: 262-453
Cow position:
Alignm length: 197
Alignm identity: 144
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 98, 18

Conread position: 262-464
Cow position:
Alignm length: 206
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 158, 17

Conread position: 262-511
Cow position:
Alignm length: 255
Alignm identity: 187
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 95, 18

Conread position: 262-555
Cow position:
Alignm length: 297
Alignm identity: 213
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 164, 17

Conread position: 262-566
Cow position:
Alignm length: 308
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-566
Cow position:
Alignm length: 308
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-590
Cow position:
Alignm length: 334
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-592
Cow position:
Alignm length: 337
Alignm identity: 235
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 164, 17

Conread position: 262-592
Cow position:
Alignm length: 339
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 10

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-592
Cow position:
Alignm length: 332
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 17

Conread position: 262-593
Cow position:
Alignm length: 337
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 17

Conread position: 262-593
Cow position:
Alignm length: 344
Alignm identity: 233
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 131, 17

Conread position: 262-593
Cow position:
Alignm length: 334
Alignm identity: 233
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 157, 17

Conread position: 262-594
Cow position:
Alignm length: 342
Alignm identity: 217
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 91, 17

Conread position: 262-595
Cow position:
Alignm length: 336
Alignm identity: 222
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 158, 47

Conread position: 262-595
Cow position:
Alignm length: 339
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 11

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 339
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 18

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 234
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 164, 17

Conread position: 262-595
Cow position:
Alignm length: 339
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 19

Conread position: 262-595
Cow position:
Alignm length: 342
Alignm identity: 231
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 45, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 17

Conread position: 265-589
Cow position:
Alignm length: 340
Alignm identity: 225
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 68, 15

Conread position: 265-589
Cow position:
Alignm length: 330
Alignm identity: 226
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 158, 14

Conread position: 265-590
Cow position:
Alignm length: 338
Alignm identity: 234
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 161, 14

Conread position: 265-592
Cow position:
Alignm length: 331
Alignm identity: 229
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 174, 14

Conread position: 265-593
Cow position:
Alignm length: 332
Alignm identity: 234
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 182, 14

Conread position: 265-593
Cow position:
Alignm length: 333
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 14

Conread position: 265-594
Cow position:
Alignm length: 335
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 14

Conread position: 265-595
Cow position:
Alignm length: 332
Alignm identity: 217
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 155, 14

Conread position: 265-595
Cow position:
Alignm length: 334
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 14

Conread position: 265-600
Cow position:
Alignm length: 339
Alignm identity: 230
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 174, 160

Conread position: 266-474
Cow position:
Alignm length: 211
Alignm identity: 151
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 171, 13

Conread position: 266-507
Cow position:
Alignm length: 244
Alignm identity: 172
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 194, 8

Conread position: 266-591
Cow position:
Alignm length: 328
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 13

Conread position: 266-593
Cow position:
Alignm length: 334
Alignm identity: 225
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 56, 13

Conread position: 266-595
Cow position:
Alignm length: 340
Alignm identity: 236
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 154, 15

Conread position: 266-595
Cow position:
Alignm length: 335
Alignm identity: 225
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 154, 14

Conread position: 267-500
Cow position:
Alignm length: 237
Alignm identity: 157
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 153, 13

Conread position: 268-593
Cow position:
Alignm length: 331
Alignm identity: 229
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 152, 11

Conread position: 268-595
Cow position:
Alignm length: 332
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 0

Conread position: 269-593
Cow position:
Alignm length: 333
Alignm identity: 223
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 75, 122

Conread position: 273-428
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 276-502
Cow position:
Alignm length: 229
Alignm identity: 152
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 161, 146

Conread position: 276-589
Cow position:
Alignm length: 319
Alignm identity: 212
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 162, 109

Conread position: 278-507
Cow position:
Alignm length: 236
Alignm identity: 177
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 48, 0

Conread position: 278-551
Cow position:
Alignm length: 277
Alignm identity: 177
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 148, 27

Conread position: 278-590
Cow position:
Alignm length: 314
Alignm identity: 205
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 157, 20

Conread position: 279-592
Cow position:
Alignm length: 318
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 81

Conread position: 279-593
Cow position:
Alignm length: 326
Alignm identity: 218
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 135, 90

Conread position: 280-593
Cow position:
Alignm length: 319
Alignm identity: 225
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 142, 49

Conread position: 280-594
Cow position:
Alignm length: 317
Alignm identity: 224
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 100, 8

Conread position: 281-555
Cow position:
Alignm length: 278
Alignm identity: 191
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 174, 214

Conread position: 282-592
Cow position:
Alignm length: 314
Alignm identity: 223
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 138, 45

Conread position: 285-481
Cow position:
Alignm length: 201
Alignm identity: 137
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 45, 69

Conread position: 285-593
Cow position:
Alignm length: 313
Alignm identity: 219
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 152, 47

Conread position: 285-594
Cow position:
Alignm length: 315
Alignm identity: 218
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 138, 72

Conread position: 286-593
Cow position:
Alignm length: 316
Alignm identity: 218
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 67, 201

Conread position: 288-592
Cow position:
Alignm length: 313
Alignm identity: 214
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 132, 43

Conread position: 295-573
Cow position:
Alignm length: 283
Alignm identity: 188
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 125, 71

Conread position: 295-595
Cow position:
Alignm length: 305
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 58

Conread position: 303-593
Cow position:
Alignm length: 294
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 307-589
Cow position:
Alignm length: 306
Alignm identity: 210
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 113, 0

Conread position: 335-595
Cow position:
Alignm length: 265
Alignm identity: 187
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 91, 25

Conread position: 335-595
Cow position:
Alignm length: 269
Alignm identity: 192
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 88, 41

Conread position: 352-595
Cow position:
Alignm length: 248
Alignm identity: 178
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 68, 56

Conread position: 363-592
Cow position:
Alignm length: 236
Alignm identity: 164
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 11, 174

Conread position: 365-595
Cow position:
Alignm length: 235
Alignm identity: 169
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 61, 0

Conread position: 365-595
Cow position:
Alignm length: 232
Alignm identity: 156
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 75, 18

Conread position: 371-592
Cow position:
Alignm length: 231
Alignm identity: 158
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 67, 35

Conread position: 390-592
Cow position:
Alignm length: 206
Alignm identity: 143
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 390-595
Cow position:
Alignm length: 211
Alignm identity: 144
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 33, 73

Conread position: 397-592
Cow position:
Alignm length: 204
Alignm identity: 145
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 430-593
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 150, 25

Conread position: 436-595
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 437-588
Cow position:
Alignm length: 153
Alignm identity: 113
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 7, 117

Conread position: 438-592
Cow position:
Alignm length: 156
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 142, 28

Conread position: 445-585
Cow position:
Alignm length: 141
Alignm identity: 105
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 461-595
Cow position:
Alignm length: 136
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 119, 101

Show alignments to all cow chromosomes.