Cow genome map

Conread name: Ss1.1-rlin03_j17.5

Conread position: 260-595
Cow position:
Alignm length: 346
Alignm identity: 231
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 81, 19

Conread position: 262-406
Cow position:
Alignm length: 145
Alignm identity: 105
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 262-406
Cow position:
Alignm length: 145
Alignm identity: 110
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 262-441
Cow position:
Alignm length: 180
Alignm identity: 132
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 262-472
Cow position:
Alignm length: 215
Alignm identity: 157
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 120, 17

Conread position: 262-511
Cow position:
Alignm length: 253
Alignm identity: 186
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 158, 17

Conread position: 262-546
Cow position:
Alignm length: 288
Alignm identity: 204
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 158, 17

Conread position: 262-558
Cow position:
Alignm length: 298
Alignm identity: 204
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 170, 17

Conread position: 262-576
Cow position:
Alignm length: 326
Alignm identity: 228
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 158, 17

Conread position: 262-588
Cow position:
Alignm length: 335
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 10

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-592
Cow position:
Alignm length: 336
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-593
Cow position:
Alignm length: 336
Alignm identity: 234
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 160, 17

Conread position: 262-593
Cow position:
Alignm length: 333
Alignm identity: 224
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 318, 17

Conread position: 262-595
Cow position:
Alignm length: 339
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 10

Conread position: 262-595
Cow position:
Alignm length: 339
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 19

Conread position: 262-595
Cow position:
Alignm length: 341
Alignm identity: 219
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 112, 19

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 18

Conread position: 262-595
Cow position:
Alignm length: 339
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 10

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 18

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 263-593
Cow position:
Alignm length: 335
Alignm identity: 223
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 157, 16

Conread position: 265-589
Cow position:
Alignm length: 330
Alignm identity: 217
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 30, 15

Conread position: 265-592
Cow position:
Alignm length: 332
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 14

Conread position: 265-592
Cow position:
Alignm length: 332
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 14

Conread position: 265-592
Cow position:
Alignm length: 334
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 14

Conread position: 265-592
Cow position:
Alignm length: 337
Alignm identity: 237
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 173, 14

Conread position: 265-592
Cow position:
Alignm length: 331
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 14

Conread position: 265-593
Cow position:
Alignm length: 333
Alignm identity: 230
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 158, 14

Conread position: 265-593
Cow position:
Alignm length: 333
Alignm identity: 229
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 155, 14

Conread position: 265-595
Cow position:
Alignm length: 337
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 14

Conread position: 266-507
Cow position:
Alignm length: 245
Alignm identity: 175
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 6, 89

Conread position: 266-593
Cow position:
Alignm length: 335
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 77

Conread position: 266-595
Cow position:
Alignm length: 334
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 13

Conread position: 266-595
Cow position:
Alignm length: 335
Alignm identity: 237
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 154, 14

Conread position: 268-556
Cow position:
Alignm length: 293
Alignm identity: 203
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 152, 11

Conread position: 276-593
Cow position:
Alignm length: 323
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 91

Conread position: 276-595
Cow position:
Alignm length: 327
Alignm identity: 229
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 168, 45

Conread position: 277-592
Cow position:
Alignm length: 320
Alignm identity: 224
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 62, 109

Conread position: 277-600
Cow position:
Alignm length: 336
Alignm identity: 225
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 143, 57

Conread position: 277-600
Cow position:
Alignm length: 329
Alignm identity: 223
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 86, 71

Conread position: 278-511
Cow position:
Alignm length: 238
Alignm identity: 173
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 133, 140

Conread position: 278-592
Cow position:
Alignm length: 321
Alignm identity: 217
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 142, 62

Conread position: 279-497
Cow position:
Alignm length: 220
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 142, 0

Conread position: 279-595
Cow position:
Alignm length: 325
Alignm identity: 217
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 108, 61

Conread position: 279-595
Cow position:
Alignm length: 321
Alignm identity: 228
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 141, 108

Conread position: 280-595
Cow position:
Alignm length: 329
Alignm identity: 223
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 58, 229

Conread position: 285-595
Cow position:
Alignm length: 314
Alignm identity: 224
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 154, 47

Conread position: 286-559
Cow position:
Alignm length: 282
Alignm identity: 182
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 227

Conread position: 287-592
Cow position:
Alignm length: 310
Alignm identity: 220
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 133, 231

Conread position: 287-593
Cow position:
Alignm length: 311
Alignm identity: 219
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 132, 233

Conread position: 287-600
Cow position:
Alignm length: 322
Alignm identity: 230
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 136, 21

Conread position: 288-595
Cow position:
Alignm length: 310
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 89

Conread position: 293-593
Cow position:
Alignm length: 303
Alignm identity: 208
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 130, 63

Conread position: 295-595
Cow position:
Alignm length: 305
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 82

Conread position: 298-595
Cow position:
Alignm length: 300
Alignm identity: 171
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 128, 148

Conread position: 305-478
Cow position:
Alignm length: 177
Alignm identity: 127
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 115, 0

Conread position: 320-592
Cow position:
Alignm length: 277
Alignm identity: 183
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 110, 19

Conread position: 326-591
Cow position:
Alignm length: 271
Alignm identity: 193
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 97, 0

Conread position: 332-593
Cow position:
Alignm length: 264
Alignm identity: 172
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 105, 16

Conread position: 336-582
Cow position:
Alignm length: 260
Alignm identity: 172
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 344-595
Cow position:
Alignm length: 256
Alignm identity: 184
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 76, 151

Conread position: 350-595
Cow position:
Alignm length: 250
Alignm identity: 177
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 76, 0

Conread position: 365-593
Cow position:
Alignm length: 231
Alignm identity: 160
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 58, 83

Conread position: 365-595
Cow position:
Alignm length: 235
Alignm identity: 169
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 61, 0

Conread position: 374-594
Cow position:
Alignm length: 225
Alignm identity: 156
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 53, 173

Conread position: 417-595
Cow position:
Alignm length: 180
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 163, 30

Conread position: 419-594
Cow position:
Alignm length: 179
Alignm identity: 130
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 18, 100

Show alignments to all cow chromosomes.