Cow genome map

Conread name: Ss1.1-rlin03_j17.5

Conread position: 258-595
Cow position:
Alignm length: 342
Alignm identity: 196
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 168, 97

Conread position: 261-591
Cow position:
Alignm length: 335
Alignm identity: 235
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 165, 18

Conread position: 261-591
Cow position:
Alignm length: 336
Alignm identity: 215
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 214, 18

Conread position: 261-593
Cow position:
Alignm length: 337
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 18

Conread position: 262-380
Cow position:
Alignm length: 119
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 262-408
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 262-421
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 262-436
Cow position:
Alignm length: 176
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 158, 17

Conread position: 262-464
Cow position:
Alignm length: 206
Alignm identity: 145
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 158, 17

Conread position: 262-474
Cow position:
Alignm length: 216
Alignm identity: 151
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 158, 17

Conread position: 262-499
Cow position:
Alignm length: 242
Alignm identity: 170
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 158, 17

Conread position: 262-525
Cow position:
Alignm length: 267
Alignm identity: 189
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 158, 19

Conread position: 262-542
Cow position:
Alignm length: 282
Alignm identity: 193
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 158, 17

Conread position: 262-544
Cow position:
Alignm length: 287
Alignm identity: 202
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 34, 17

Conread position: 262-549
Cow position:
Alignm length: 291
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-558
Cow position:
Alignm length: 304
Alignm identity: 196
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 171, 19

Conread position: 262-566
Cow position:
Alignm length: 307
Alignm identity: 217
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 164, 17

Conread position: 262-572
Cow position:
Alignm length: 319
Alignm identity: 214
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 169, 17

Conread position: 262-587
Cow position:
Alignm length: 331
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 19

Conread position: 262-589
Cow position:
Alignm length: 332
Alignm identity: 221
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 24, 17

Conread position: 262-589
Cow position:
Alignm length: 331
Alignm identity: 235
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 175, 17

Conread position: 262-590
Cow position:
Alignm length: 333
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 78

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 228
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 158, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 231
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 164, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-592
Cow position:
Alignm length: 336
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 232
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 164, 17

Conread position: 262-592
Cow position:
Alignm length: 339
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 17

Conread position: 262-592
Cow position:
Alignm length: 341
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 17

Conread position: 262-592
Cow position:
Alignm length: 334
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 235
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 164, 17

Conread position: 262-592
Cow position:
Alignm length: 336
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-593
Cow position:
Alignm length: 336
Alignm identity: 225
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 126, 17

Conread position: 262-593
Cow position:
Alignm length: 338
Alignm identity: 227
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 158, 17

Conread position: 262-593
Cow position:
Alignm length: 337
Alignm identity: 234
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 158, 17

Conread position: 262-594
Cow position:
Alignm length: 337
Alignm identity: 223
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 158, 18

Conread position: 262-594
Cow position:
Alignm length: 335
Alignm identity: 228
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 172, 17

Conread position: 262-594
Cow position:
Alignm length: 338
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 17

Conread position: 262-595
Cow position:
Alignm length: 339
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 11

Conread position: 262-595
Cow position:
Alignm length: 339
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 17

Conread position: 262-595
Cow position:
Alignm length: 337
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 337
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-595
Cow position:
Alignm length: 339
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 341
Alignm identity: 227
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 154, 18

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 335
Alignm identity: 238
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 315, 17

Conread position: 263-555
Cow position:
Alignm length: 296
Alignm identity: 209
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 157, 18

Conread position: 265-421
Cow position:
Alignm length: 157
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 265-487
Cow position:
Alignm length: 227
Alignm identity: 160
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 155, 14

Conread position: 265-546
Cow position:
Alignm length: 283
Alignm identity: 204
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 155, 14

Conread position: 265-591
Cow position:
Alignm length: 332
Alignm identity: 230
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 158, 14

Conread position: 265-592
Cow position:
Alignm length: 332
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 14

Conread position: 265-595
Cow position:
Alignm length: 336
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 14

Conread position: 265-595
Cow position:
Alignm length: 337
Alignm identity: 235
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 88, 14

Conread position: 265-595
Cow position:
Alignm length: 335
Alignm identity: 239
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 155, 14

Conread position: 266-580
Cow position:
Alignm length: 326
Alignm identity: 226
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 67, 14

Conread position: 266-584
Cow position:
Alignm length: 326
Alignm identity: 230
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 70, 14

Conread position: 266-592
Cow position:
Alignm length: 329
Alignm identity: 231
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 152, 7

Conread position: 266-592
Cow position:
Alignm length: 343
Alignm identity: 229
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 58, 13

Conread position: 266-592
Cow position:
Alignm length: 330
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 13

Conread position: 266-592
Cow position:
Alignm length: 331
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 13

Conread position: 266-593
Cow position:
Alignm length: 332
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 13

Conread position: 266-594
Cow position:
Alignm length: 340
Alignm identity: 224
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 148, 14

Conread position: 266-595
Cow position:
Alignm length: 334
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 13

Conread position: 268-592
Cow position:
Alignm length: 329
Alignm identity: 228
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 155, 11

Conread position: 268-593
Cow position:
Alignm length: 332
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 11

Conread position: 268-595
Cow position:
Alignm length: 333
Alignm identity: 226
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 169, 72

Conread position: 268-595
Cow position:
Alignm length: 344
Alignm identity: 235
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 152, 11

Conread position: 269-592
Cow position:
Alignm length: 331
Alignm identity: 221
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 44, 202

Conread position: 271-592
Cow position:
Alignm length: 325
Alignm identity: 214
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 291, 51

Conread position: 271-595
Cow position:
Alignm length: 329
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 61

Conread position: 276-592
Cow position:
Alignm length: 318
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 12

Conread position: 276-593
Cow position:
Alignm length: 320
Alignm identity: 212
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 144, 33

Conread position: 276-596
Cow position:
Alignm length: 330
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 62

Conread position: 277-507
Cow position:
Alignm length: 233
Alignm identity: 159
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 141, 21

Conread position: 277-592
Cow position:
Alignm length: 319
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 92

Conread position: 277-592
Cow position:
Alignm length: 321
Alignm identity: 223
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 62, 115

Conread position: 277-592
Cow position:
Alignm length: 320
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 0

Conread position: 277-595
Cow position:
Alignm length: 325
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 162

Conread position: 278-567
Cow position:
Alignm length: 296
Alignm identity: 211
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 147, 69

Conread position: 280-573
Cow position:
Alignm length: 305
Alignm identity: 204
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 128, 58

Conread position: 280-590
Cow position:
Alignm length: 320
Alignm identity: 217
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 58, 142

Conread position: 280-592
Cow position:
Alignm length: 317
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 264

Conread position: 281-567
Cow position:
Alignm length: 292
Alignm identity: 208
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 144, 66

Conread position: 281-595
Cow position:
Alignm length: 332
Alignm identity: 228
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 59, 30

Conread position: 283-592
Cow position:
Alignm length: 318
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 283-594
Cow position:
Alignm length: 317
Alignm identity: 221
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 124, 41

Conread position: 285-514
Cow position:
Alignm length: 231
Alignm identity: 156
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 135, 100

Conread position: 285-593
Cow position:
Alignm length: 313
Alignm identity: 219
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 135, 46

Conread position: 287-587
Cow position:
Alignm length: 310
Alignm identity: 212
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 53, 103

Conread position: 287-590
Cow position:
Alignm length: 308
Alignm identity: 223
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 130, 52

Conread position: 287-593
Cow position:
Alignm length: 309
Alignm identity: 214
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 131, 38

Conread position: 288-561
Cow position:
Alignm length: 278
Alignm identity: 186
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 135, 76

Conread position: 295-511
Cow position:
Alignm length: 220
Alignm identity: 154
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 125, 0

Conread position: 297-592
Cow position:
Alignm length: 297
Alignm identity: 206
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 126, 148

Conread position: 303-596
Cow position:
Alignm length: 305
Alignm identity: 211
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 34, 0

Conread position: 316-595
Cow position:
Alignm length: 282
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 9

Conread position: 317-595
Cow position:
Alignm length: 285
Alignm identity: 194
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 103, 35

Conread position: 328-596
Cow position:
Alignm length: 288
Alignm identity: 202
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 14, 33

Conread position: 335-567
Cow position:
Alignm length: 237
Alignm identity: 154
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 336-595
Cow position:
Alignm length: 264
Alignm identity: 190
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 90, 0

Conread position: 339-591
Cow position:
Alignm length: 255
Alignm identity: 180
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 56, 37

Conread position: 354-594
Cow position:
Alignm length: 243
Alignm identity: 177
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 145, 93

Conread position: 354-595
Cow position:
Alignm length: 248
Alignm identity: 171
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 64, 159

Conread position: 370-594
Cow position:
Alignm length: 228
Alignm identity: 169
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 56, 141

Conread position: 370-595
Cow position:
Alignm length: 234
Alignm identity: 178
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 61, 169

Conread position: 371-595
Cow position:
Alignm length: 229
Alignm identity: 160
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 55, 0

Conread position: 384-592
Cow position:
Alignm length: 213
Alignm identity: 151
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 42, 0

Conread position: 390-595
Cow position:
Alignm length: 210
Alignm identity: 148
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 149

Conread position: 395-595
Cow position:
Alignm length: 205
Alignm identity: 148
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 31, 0

Conread position: 410-594
Cow position:
Alignm length: 190
Alignm identity: 135
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 433-592
Cow position:
Alignm length: 161
Alignm identity: 116
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 149, 14

Conread position: 438-590
Cow position:
Alignm length: 154
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 142, 68

Conread position: 445-596
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 58

Conread position: 449-591
Cow position:
Alignm length: 143
Alignm identity: 103
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.