Cow genome map

Conread name: Ss1.1-rlin03_j17.5

Conread position: 241-595
Cow position:
Alignm length: 359
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 298

Conread position: 261-591
Cow position:
Alignm length: 336
Alignm identity: 227
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 103, 18

Conread position: 261-595
Cow position:
Alignm length: 338
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 18

Conread position: 262-412
Cow position:
Alignm length: 152
Alignm identity: 112
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 88, 17

Conread position: 262-441
Cow position:
Alignm length: 181
Alignm identity: 130
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 158, 17

Conread position: 262-446
Cow position:
Alignm length: 187
Alignm identity: 144
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 161, 17

Conread position: 262-458
Cow position:
Alignm length: 200
Alignm identity: 147
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 158, 17

Conread position: 262-502
Cow position:
Alignm length: 242
Alignm identity: 169
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 61, 17

Conread position: 262-507
Cow position:
Alignm length: 249
Alignm identity: 175
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 168, 17

Conread position: 262-571
Cow position:
Alignm length: 314
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 17

Conread position: 262-582
Cow position:
Alignm length: 325
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 17

Conread position: 262-585
Cow position:
Alignm length: 327
Alignm identity: 230
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 158, 17

Conread position: 262-585
Cow position:
Alignm length: 328
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-587
Cow position:
Alignm length: 339
Alignm identity: 238
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 7, 18

Conread position: 262-587
Cow position:
Alignm length: 331
Alignm identity: 226
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 77, 17

Conread position: 262-589
Cow position:
Alignm length: 336
Alignm identity: 226
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 86, 17

Conread position: 262-590
Cow position:
Alignm length: 339
Alignm identity: 233
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 86, 17

Conread position: 262-590
Cow position:
Alignm length: 333
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-590
Cow position:
Alignm length: 335
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 17

Conread position: 262-590
Cow position:
Alignm length: 339
Alignm identity: 229
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 33, 18

Conread position: 262-591
Cow position:
Alignm length: 332
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 17

Conread position: 262-591
Cow position:
Alignm length: 334
Alignm identity: 228
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 158, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 234
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 158, 19

Conread position: 262-592
Cow position:
Alignm length: 334
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-592
Cow position:
Alignm length: 334
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 229
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 164, 19

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 230
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 158, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 11

Conread position: 262-592
Cow position:
Alignm length: 334
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 10

Conread position: 262-592
Cow position:
Alignm length: 336
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 17

Conread position: 262-592
Cow position:
Alignm length: 334
Alignm identity: 234
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 158, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 229
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 158, 17

Conread position: 262-592
Cow position:
Alignm length: 334
Alignm identity: 224
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 95, 17

Conread position: 262-592
Cow position:
Alignm length: 337
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 231
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 160, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-592
Cow position:
Alignm length: 357
Alignm identity: 245
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 135, 17

Conread position: 262-592
Cow position:
Alignm length: 335
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-593
Cow position:
Alignm length: 337
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 17

Conread position: 262-593
Cow position:
Alignm length: 335
Alignm identity: 208
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 160, 18

Conread position: 262-593
Cow position:
Alignm length: 337
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 17

Conread position: 262-593
Cow position:
Alignm length: 338
Alignm identity: 233
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 158, 17

Conread position: 262-593
Cow position:
Alignm length: 334
Alignm identity: 230
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 161, 19

Conread position: 262-593
Cow position:
Alignm length: 337
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 17

Conread position: 262-593
Cow position:
Alignm length: 334
Alignm identity: 221
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 157, 17

Conread position: 262-593
Cow position:
Alignm length: 337
Alignm identity: 222
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 236, 17

Conread position: 262-594
Cow position:
Alignm length: 336
Alignm identity: 228
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 339
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-595
Cow position:
Alignm length: 337
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-595
Cow position:
Alignm length: 339
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 17

Conread position: 262-595
Cow position:
Alignm length: 339
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 342
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 339
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-595
Cow position:
Alignm length: 336
Alignm identity: 209
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 176, 18

Conread position: 262-595
Cow position:
Alignm length: 346
Alignm identity: 234
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 69, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 10

Conread position: 262-595
Cow position:
Alignm length: 342
Alignm identity: 226
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 82, 17

Conread position: 262-595
Cow position:
Alignm length: 338
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 262-600
Cow position:
Alignm length: 348
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 17

Conread position: 262-600
Cow position:
Alignm length: 343
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 11

Conread position: 265-500
Cow position:
Alignm length: 241
Alignm identity: 165
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 159, 14

Conread position: 265-565
Cow position:
Alignm length: 304
Alignm identity: 207
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 155, 14

Conread position: 265-566
Cow position:
Alignm length: 305
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 14

Conread position: 265-587
Cow position:
Alignm length: 330
Alignm identity: 228
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 78, 14

Conread position: 265-589
Cow position:
Alignm length: 338
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 10

Conread position: 265-591
Cow position:
Alignm length: 331
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 14

Conread position: 265-592
Cow position:
Alignm length: 332
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 7

Conread position: 265-592
Cow position:
Alignm length: 332
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 14

Conread position: 265-592
Cow position:
Alignm length: 329
Alignm identity: 228
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 315, 14

Conread position: 265-593
Cow position:
Alignm length: 334
Alignm identity: 222
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 117, 14

Conread position: 265-593
Cow position:
Alignm length: 333
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 14

Conread position: 265-593
Cow position:
Alignm length: 332
Alignm identity: 222
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 155, 14

Conread position: 265-595
Cow position:
Alignm length: 335
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 15

Conread position: 265-595
Cow position:
Alignm length: 335
Alignm identity: 230
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 155, 14

Conread position: 265-595
Cow position:
Alignm length: 335
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 14

Conread position: 266-406
Cow position:
Alignm length: 141
Alignm identity: 103
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 266-554
Cow position:
Alignm length: 296
Alignm identity: 200
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 19, 13

Conread position: 266-587
Cow position:
Alignm length: 325
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 13

Conread position: 266-592
Cow position:
Alignm length: 331
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 13

Conread position: 266-592
Cow position:
Alignm length: 331
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 13

Conread position: 266-593
Cow position:
Alignm length: 332
Alignm identity: 224
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 80, 13

Conread position: 266-595
Cow position:
Alignm length: 333
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 13

Conread position: 267-582
Cow position:
Alignm length: 319
Alignm identity: 225
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 115, 13

Conread position: 267-585
Cow position:
Alignm length: 320
Alignm identity: 207
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 153, 14

Conread position: 267-592
Cow position:
Alignm length: 331
Alignm identity: 230
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 159, 12

Conread position: 267-594
Cow position:
Alignm length: 329
Alignm identity: 225
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 43, 12

Conread position: 267-595
Cow position:
Alignm length: 336
Alignm identity: 235
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 110, 12

Conread position: 271-582
Cow position:
Alignm length: 315
Alignm identity: 212
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 180, 144

Conread position: 276-552
Cow position:
Alignm length: 282
Alignm identity: 205
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 144, 72

Conread position: 276-595
Cow position:
Alignm length: 325
Alignm identity: 221
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 144, 55

Conread position: 277-562
Cow position:
Alignm length: 288
Alignm identity: 201
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 139, 87

Conread position: 277-591
Cow position:
Alignm length: 318
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 277-592
Cow position:
Alignm length: 320
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 0

Conread position: 277-595
Cow position:
Alignm length: 328
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 63

Conread position: 277-596
Cow position:
Alignm length: 327
Alignm identity: 212
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 143, 63

Conread position: 278-516
Cow position:
Alignm length: 244
Alignm identity: 176
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 104, 115

Conread position: 278-587
Cow position:
Alignm length: 315
Alignm identity: 216
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 145, 62

Conread position: 278-592
Cow position:
Alignm length: 320
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 269

Conread position: 278-592
Cow position:
Alignm length: 318
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 0

Conread position: 278-595
Cow position:
Alignm length: 326
Alignm identity: 220
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 65, 83

Conread position: 279-573
Cow position:
Alignm length: 298
Alignm identity: 208
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 141, 81

Conread position: 279-592
Cow position:
Alignm length: 318
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 256

Conread position: 280-481
Cow position:
Alignm length: 205
Alignm identity: 143
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 150, 0

Conread position: 280-587
Cow position:
Alignm length: 308
Alignm identity: 216
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 84, 0

Conread position: 280-592
Cow position:
Alignm length: 319
Alignm identity: 223
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 59, 106

Conread position: 280-592
Cow position:
Alignm length: 318
Alignm identity: 220
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 136, 38

Conread position: 280-595
Cow position:
Alignm length: 321
Alignm identity: 206
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 118, 80

Conread position: 281-600
Cow position:
Alignm length: 325
Alignm identity: 228
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 118, 46

Conread position: 285-590
Cow position:
Alignm length: 322
Alignm identity: 227
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 59, 39

Conread position: 286-590
Cow position:
Alignm length: 310
Alignm identity: 210
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 74, 79

Conread position: 293-535
Cow position:
Alignm length: 246
Alignm identity: 174
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 133, 78

Conread position: 296-570
Cow position:
Alignm length: 283
Alignm identity: 187
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 44

Conread position: 303-592
Cow position:
Alignm length: 292
Alignm identity: 195
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 115, 31

Conread position: 308-591
Cow position:
Alignm length: 288
Alignm identity: 203
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 118, 62

Conread position: 308-595
Cow position:
Alignm length: 300
Alignm identity: 215
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 112, 218

Conread position: 308-595
Cow position:
Alignm length: 292
Alignm identity: 203
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 118, 180

Conread position: 309-596
Cow position:
Alignm length: 292
Alignm identity: 205
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 111, 162

Conread position: 310-590
Cow position:
Alignm length: 285
Alignm identity: 194
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 116, 63

Conread position: 318-568
Cow position:
Alignm length: 254
Alignm identity: 174
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 105, 59

Conread position: 318-590
Cow position:
Alignm length: 273
Alignm identity: 194
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 53, 0

Conread position: 322-592
Cow position:
Alignm length: 273
Alignm identity: 190
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 122, 66

Conread position: 335-592
Cow position:
Alignm length: 260
Alignm identity: 180
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 22, 89

Conread position: 335-595
Cow position:
Alignm length: 267
Alignm identity: 174
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 32

Conread position: 336-595
Cow position:
Alignm length: 266
Alignm identity: 190
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 24, 212

Conread position: 340-595
Cow position:
Alignm length: 262
Alignm identity: 193
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 10, 50

Conread position: 344-592
Cow position:
Alignm length: 252
Alignm identity: 166
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 79, 175

Conread position: 354-590
Cow position:
Alignm length: 246
Alignm identity: 165
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 17, 142

Conread position: 364-595
Cow position:
Alignm length: 237
Alignm identity: 160
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 57, 176

Conread position: 366-593
Cow position:
Alignm length: 230
Alignm identity: 162
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 55, 17

Conread position: 388-593
Cow position:
Alignm length: 210
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 403-595
Cow position:
Alignm length: 197
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 23, 0

Conread position: 434-593
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 145, 27

Conread position: 438-589
Cow position:
Alignm length: 152
Alignm identity: 112
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 439-587
Cow position:
Alignm length: 149
Alignm identity: 107
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 445-592
Cow position:
Alignm length: 149
Alignm identity: 109
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 135, 0

Show alignments to all cow chromosomes.