Cow genome map
| Conread name: | Ss1.1-rlin03_j17.5 |
| Conread position: | 204-595 |
| Cow position: | chr3:42151656-42151270 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 268 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 47, 11 |
| Conread position: | 234-595 |
| Cow position: | chr3:16885127-16884772 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 241 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 198, 33 |
| Conread position: | 252-595 |
| Cow position: | chr3:18113514-18113168 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 15 |
| Conread position: | 261-470 |
| Cow position: | chr3:12677409-12677204 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 165, 18 |
| Conread position: | 261-511 |
| Cow position: | chr3:24637618-24637865 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 176, 18 |
| Conread position: | 261-511 |
| Cow position: | chr3:49742644-49742896 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 184 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 159, 18 |
| Conread position: | 261-582 |
| Cow position: | chr3:576863-577188 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 64, 139 |
| Conread position: | 261-582 |
| Cow position: | chr3:76352471-76352795 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 105, 19 |
| Conread position: | 261-592 |
| Cow position: | chr3:10034629-10034941 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 107, 19 |
| Conread position: | 261-595 |
| Cow position: | chr3:7326452-7326776 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 176, 18 |
| Conread position: | 261-595 |
| Cow position: | chr3:27920630-27920965 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 18 |
| Conread position: | 262-417 |
| Cow position: | chr3:79430565-79430412 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 110, 18 |
| Conread position: | 262-421 |
| Cow position: | chr3:11784362-11784204 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 262-421 |
| Cow position: | chr3:28670271-28670428 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 262-446 |
| Cow position: | chr3:64813998-64813816 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 158, 23 |
| Conread position: | 262-464 |
| Cow position: | chr3:21180513-21180312 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 156, 17 |
| Conread position: | 262-464 |
| Cow position: | chr3:63001423-63001223 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 13, 98 |
| Conread position: | 262-486 |
| Cow position: | chr3:6323839-6324065 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-488 |
| Cow position: | chr3:9433535-9433753 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 174, 17 |
| Conread position: | 262-492 |
| Cow position: | chr3:4288266-4288495 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 262-496 |
| Cow position: | chr3:15053521-15053298 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 158, 31 |
| Conread position: | 262-499 |
| Cow position: | chr3:29641603-29641835 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-500 |
| Cow position: | chr3:32361611-32361847 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 113, 17 |
| Conread position: | 262-502 |
| Cow position: | chr3:55729231-55729470 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-506 |
| Cow position: | chr3:64214900-64214668 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 158, 19 |
| Conread position: | 262-511 |
| Cow position: | chr3:19590525-19590277 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 160, 17 |
| Conread position: | 262-511 |
| Cow position: | chr3:37009997-37009746 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-541 |
| Cow position: | chr3:57996299-57996580 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-548 |
| Cow position: | chr3:2870978-2871266 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 206 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-556 |
| Cow position: | chr3:15500918-15501209 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 130, 18 |
| Conread position: | 262-559 |
| Cow position: | chr3:25998961-25998659 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 159, 17 |
| Conread position: | 262-566 |
| Cow position: | chr3:49003352-49003658 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-582 |
| Cow position: | chr3:32704263-32703933 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 147, 17 |
| Conread position: | 262-582 |
| Cow position: | chr3:33844412-33844094 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 158, 18 |
| Conread position: | 262-587 |
| Cow position: | chr3:2366960-2366632 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 17 |
| Conread position: | 262-587 |
| Cow position: | chr3:70889463-70889785 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 168, 23 |
| Conread position: | 262-589 |
| Cow position: | chr3:4029916-4030258 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 160, 17 |
| Conread position: | 262-589 |
| Cow position: | chr3:40102614-40102293 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 223 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 156, 19 |
| Conread position: | 262-590 |
| Cow position: | chr3:37971236-37971564 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 17 |
| Conread position: | 262-590 |
| Cow position: | chr3:41082355-41082679 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-590 |
| Cow position: | chr3:42449296-42449615 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 95, 17 |
| Conread position: | 262-590 |
| Cow position: | chr3:49543020-49542689 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 238 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 161, 17 |
| Conread position: | 262-590 |
| Cow position: | chr3:58128268-58128589 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 222, 17 |
| Conread position: | 262-591 |
| Cow position: | chr3:34028741-34028411 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 17 |
| Conread position: | 262-592 |
| Cow position: | chr3:596315-596635 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-592 |
| Cow position: | chr3:2708683-2708356 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 262-592 |
| Cow position: | chr3:7477736-7477408 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 234 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 156, 17 |
| Conread position: | 262-592 |
| Cow position: | chr3:18813694-18814021 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 10 |
| Conread position: | 262-592 |
| Cow position: | chr3:19754773-19754447 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 262-592 |
| Cow position: | chr3:22725584-22725255 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 17 |
| Conread position: | 262-592 |
| Cow position: | chr3:23009576-23009906 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 262-592 |
| Cow position: | chr3:23205697-23205365 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 10 |
| Conread position: | 262-592 |
| Cow position: | chr3:24443913-24443580 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-592 |
| Cow position: | chr3:24573962-24573645 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 237 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 169, 17 |
| Conread position: | 262-592 |
| Cow position: | chr3:34875622-34875960 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 17 |
| Conread position: | 262-592 |
| Cow position: | chr3:36401780-36402108 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 17 |
| Conread position: | 262-592 |
| Cow position: | chr3:36690011-36689679 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 17 |
| Conread position: | 262-592 |
| Cow position: | chr3:38868766-38869095 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 262-592 |
| Cow position: | chr3:48602436-48602767 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 17 |
| Conread position: | 262-592 |
| Cow position: | chr3:49135375-49135044 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 262-592 |
| Cow position: | chr3:59863749-59864069 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 235 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 262-592 |
| Cow position: | chr3:66622400-66622730 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 262-592 |
| Cow position: | chr3:66849003-66848679 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 170, 16 |
| Conread position: | 262-592 |
| Cow position: | chr3:72632254-72632583 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 262-592 |
| Cow position: | chr3:73303690-73304019 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-592 |
| Cow position: | chr3:75039666-75039331 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-592 |
| Cow position: | chr3:78025251-78024918 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-593 |
| Cow position: | chr3:3982817-3983151 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 17 |
| Conread position: | 262-593 |
| Cow position: | chr3:6687988-6688329 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 69, 13 |
| Conread position: | 262-593 |
| Cow position: | chr3:14862385-14862721 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 60, 17 |
| Conread position: | 262-593 |
| Cow position: | chr3:24587062-24586728 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 23 |
| Conread position: | 262-593 |
| Cow position: | chr3:27865359-27865690 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 57, 18 |
| Conread position: | 262-593 |
| Cow position: | chr3:34089128-34088797 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 226 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 161, 17 |
| Conread position: | 262-593 |
| Cow position: | chr3:45976684-45977017 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 17 |
| Conread position: | 262-593 |
| Cow position: | chr3:48524930-48525262 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 17 |
| Conread position: | 262-593 |
| Cow position: | chr3:49563193-49563525 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 262-593 |
| Cow position: | chr3:56337770-56337436 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-593 |
| Cow position: | chr3:57482538-57482208 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 17 |
| Conread position: | 262-593 |
| Cow position: | chr3:57741714-57742041 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 17 |
| Conread position: | 262-593 |
| Cow position: | chr3:61675884-61676209 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 234 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 146, 17 |
| Conread position: | 262-593 |
| Cow position: | chr3:62881553-62881881 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 17 |
| Conread position: | 262-593 |
| Cow position: | chr3:63256297-63256627 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 17 |
| Conread position: | 262-593 |
| Cow position: | chr3:63690072-63689730 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 17 |
| Conread position: | 262-593 |
| Cow position: | chr3:69931652-69931318 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-594 |
| Cow position: | chr3:29329101-29328766 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 17 |
| Conread position: | 262-594 |
| Cow position: | chr3:50124810-50124483 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-595 |
| Cow position: | chr3:1031156-1031485 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-595 |
| Cow position: | chr3:3525227-3525545 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 98, 17 |
| Conread position: | 262-595 |
| Cow position: | chr3:6784591-6784925 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 13 |
| Conread position: | 262-595 |
| Cow position: | chr3:7156529-7156198 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-595 |
| Cow position: | chr3:7246923-7246586 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-595 |
| Cow position: | chr3:13035871-13036207 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-595 |
| Cow position: | chr3:13724533-13724194 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 262-595 |
| Cow position: | chr3:16225072-16225398 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 17 |
| Conread position: | 262-595 |
| Cow position: | chr3:17938810-17938480 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 262-595 |
| Cow position: | chr3:18861624-18861960 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-595 |
| Cow position: | chr3:19798971-19798635 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-595 |
| Cow position: | chr3:19941111-19941433 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 234 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 177, 17 |
| Conread position: | 262-595 |
| Cow position: | chr3:22338103-22338425 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 236 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-595 |
| Cow position: | chr3:26743690-26743354 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 17 |
| Conread position: | 262-595 |
| Cow position: | chr3:29324343-29324672 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 237 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 56, 120 |
| Conread position: | 262-595 |
| Cow position: | chr3:29574932-29574603 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 262-595 |
| Cow position: | chr3:30990063-30989727 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-595 |
| Cow position: | chr3:32620860-32620524 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 17 |
| Conread position: | 262-595 |
| Cow position: | chr3:34014523-34014859 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 17 |
| Conread position: | 262-595 |
| Cow position: | chr3:35611345-35611671 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 235 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-595 |
| Cow position: | chr3:38253927-38254261 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 243 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 84, 8 |
| Conread position: | 262-595 |
| Cow position: | chr3:40337958-40337626 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-595 |
| Cow position: | chr3:41208414-41208078 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-595 |
| Cow position: | chr3:44670666-44670324 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 243 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 262-595 |
| Cow position: | chr3:46859103-46858767 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-595 |
| Cow position: | chr3:47079425-47079096 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 262-595 |
| Cow position: | chr3:48845184-48845523 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 17 |
| Conread position: | 262-595 |
| Cow position: | chr3:49908831-49908495 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 17 |
| Conread position: | 262-595 |
| Cow position: | chr3:49998323-49998655 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-595 |
| Cow position: | chr3:50203722-50204064 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 17 |
| Conread position: | 262-595 |
| Cow position: | chr3:53048602-53048262 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 82, 17 |
| Conread position: | 262-595 |
| Cow position: | chr3:53881296-53880967 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-595 |
| Cow position: | chr3:56328306-56328643 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-595 |
| Cow position: | chr3:58887951-58887621 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 16, 105 |
| Conread position: | 262-595 |
| Cow position: | chr3:64428037-64427719 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 266, 17 |
| Conread position: | 262-595 |
| Cow position: | chr3:64813262-64812926 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 234 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-595 |
| Cow position: | chr3:66969698-66969363 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-595 |
| Cow position: | chr3:68718525-68718189 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 262-595 |
| Cow position: | chr3:68890387-68890054 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 262-595 |
| Cow position: | chr3:72106611-72106277 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 234 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 175, 18 |
| Conread position: | 262-595 |
| Cow position: | chr3:74059659-74059994 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 11 |
| Conread position: | 262-595 |
| Cow position: | chr3:83766434-83766770 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 263-592 |
| Cow position: | chr3:19796013-19795684 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 16 |
| Conread position: | 263-592 |
| Cow position: | chr3:84112620-84112942 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 230 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 157, 16 |
| Conread position: | 265-413 |
| Cow position: | chr3:33635452-33635597 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 265-414 |
| Cow position: | chr3:15657353-15657206 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 144, 14 |
| Conread position: | 265-421 |
| Cow position: | chr3:22085244-22085091 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 21, 14 |
| Conread position: | 265-441 |
| Cow position: | chr3:54773119-54773285 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 265-491 |
| Cow position: | chr3:36862270-36862042 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 155, 14 |
| Conread position: | 265-497 |
| Cow position: | chr3:34040388-34040157 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 157, 14 |
| Conread position: | 265-541 |
| Cow position: | chr3:80580618-80580897 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 107, 14 |
| Conread position: | 265-582 |
| Cow position: | chr3:64691228-64691553 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 150, 14 |
| Conread position: | 265-589 |
| Cow position: | chr3:24457015-24456682 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 14 |
| Conread position: | 265-592 |
| Cow position: | chr3:19946432-19946757 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 155, 14 |
| Conread position: | 265-592 |
| Cow position: | chr3:23288148-23287821 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 14 |
| Conread position: | 265-592 |
| Cow position: | chr3:36876474-36876145 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 14 |
| Conread position: | 265-593 |
| Cow position: | chr3:18461925-18461606 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 102, 14 |
| Conread position: | 265-593 |
| Cow position: | chr3:24355787-24356111 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 154, 14 |
| Conread position: | 265-593 |
| Cow position: | chr3:54787255-54787594 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 33, 14 |
| Conread position: | 265-593 |
| Cow position: | chr3:56147496-56147822 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 14 |
| Conread position: | 265-593 |
| Cow position: | chr3:57455193-57455518 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 155, 14 |
| Conread position: | 265-593 |
| Cow position: | chr3:72670365-72670040 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 14 |
| Conread position: | 265-593 |
| Cow position: | chr3:74850947-74850618 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 14 |
| Conread position: | 265-595 |
| Cow position: | chr3:599686-600003 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 158, 14 |
| Conread position: | 265-595 |
| Cow position: | chr3:1504293-1504617 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 155, 14 |
| Conread position: | 265-595 |
| Cow position: | chr3:1705373-1705044 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 153, 7 |
| Conread position: | 265-595 |
| Cow position: | chr3:21004006-21004333 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 172, 14 |
| Conread position: | 265-595 |
| Cow position: | chr3:29129282-29129609 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 16 |
| Conread position: | 265-595 |
| Cow position: | chr3:34505162-34504830 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 14 |
| Conread position: | 265-595 |
| Cow position: | chr3:37627151-37627482 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 14 |
| Conread position: | 265-595 |
| Cow position: | chr3:64025945-64025613 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 13 |
| Conread position: | 265-595 |
| Cow position: | chr3:64652851-64653184 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 14 |
| Conread position: | 265-596 |
| Cow position: | chr3:31320540-31320860 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 31, 15 |
| Conread position: | 265-596 |
| Cow position: | chr3:77589025-77588708 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 157, 16 |
| Conread position: | 265-600 |
| Cow position: | chr3:33325304-33325645 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 217 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 21, 14 |
| Conread position: | 266-589 |
| Cow position: | chr3:10242843-10243165 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 13 |
| Conread position: | 266-592 |
| Cow position: | chr3:43191085-43190756 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 6 |
| Conread position: | 266-592 |
| Cow position: | chr3:49733757-49734081 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 13 |
| Conread position: | 266-593 |
| Cow position: | chr3:24347384-24347709 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 160, 13 |
| Conread position: | 266-593 |
| Cow position: | chr3:54654956-54655285 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 224 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 154, 14 |
| Conread position: | 266-600 |
| Cow position: | chr3:52510455-52510784 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 172, 14 |
| Conread position: | 267-595 |
| Cow position: | chr3:14890122-14889795 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 12 |
| Conread position: | 268-464 |
| Cow position: | chr3:82707340-82707137 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 44, 11 |
| Conread position: | 268-502 |
| Cow position: | chr3:56399434-56399668 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 152, 11 |
| Conread position: | 268-508 |
| Cow position: | chr3:43317678-43317438 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 77, 11 |
| Conread position: | 268-585 |
| Cow position: | chr3:3789827-3790142 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 11 |
| Conread position: | 268-585 |
| Cow position: | chr3:35886154-35885831 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 136, 11 |
| Conread position: | 268-587 |
| Cow position: | chr3:3938044-3938353 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 152, 11 |
| Conread position: | 269-565 |
| Cow position: | chr3:63240029-63239738 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 153, 10 |
| Conread position: | 276-375 |
| Cow position: | chr3:6745086-6745185 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 82 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 276-500 |
| Cow position: | chr3:14798616-14798842 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 144, 5 |
| Conread position: | 276-595 |
| Cow position: | chr3:68697773-68697450 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 276-595 |
| Cow position: | chr3:68871555-68871233 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 276-595 |
| Cow position: | chr3:69963598-69963284 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 164, 93 |
| Conread position: | 276-596 |
| Cow position: | chr3:53413287-53413594 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 161, 93 |
| Conread position: | 277-441 |
| Cow position: | chr3:2904839-2904674 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 277-470 |
| Cow position: | chr3:82157512-82157706 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 153, 50 |
| Conread position: | 277-508 |
| Cow position: | chr3:67747110-67746882 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 143, 87 |
| Conread position: | 277-592 |
| Cow position: | chr3:5885703-5886012 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 32, 78 |
| Conread position: | 277-592 |
| Cow position: | chr3:30320459-30320778 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 277-592 |
| Cow position: | chr3:40825594-40825912 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 75 |
| Conread position: | 277-592 |
| Cow position: | chr3:46504766-46505080 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 143, 83 |
| Conread position: | 277-593 |
| Cow position: | chr3:31121947-31121629 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 144, 124 |
| Conread position: | 277-593 |
| Cow position: | chr3:38495973-38496293 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 146, 78 |
| Conread position: | 277-593 |
| Cow position: | chr3:71140417-71140102 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 24, 64 |
| Conread position: | 278-582 |
| Cow position: | chr3:62820999-62821293 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 9, 131 |
| Conread position: | 278-590 |
| Cow position: | chr3:19719340-19719022 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 217 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 130, 62 |
| Conread position: | 278-595 |
| Cow position: | chr3:36716440-36716126 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 225 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 150, 62 |
| Conread position: | 279-595 |
| Cow position: | chr3:11510644-11510321 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 141, 108 |
| Conread position: | 279-595 |
| Cow position: | chr3:31020880-31021200 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 222 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 279-600 |
| Cow position: | chr3:48239460-48239780 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 224 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 158, 81 |
| Conread position: | 280-508 |
| Cow position: | chr3:78693264-78693036 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 92, 43 |
| Conread position: | 280-593 |
| Cow position: | chr3:67628554-67628236 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 111, 70 |
| Conread position: | 282-589 |
| Cow position: | chr3:62787530-62787235 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 226 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 135, 81 |
| Conread position: | 282-600 |
| Cow position: | chr3:58855449-58855772 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 235 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 8, 62 |
| Conread position: | 282-600 |
| Cow position: | chr3:76004591-76004272 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 224 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 78, 96 |
| Conread position: | 283-568 |
| Cow position: | chr3:74752812-74753084 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 210 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 137, 161 |
| Conread position: | 285-580 |
| Cow position: | chr3:52662607-52662900 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 135, 75 |
| Conread position: | 285-592 |
| Cow position: | chr3:30616733-30616423 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 248 |
| Conread position: | 286-589 |
| Cow position: | chr3:77452497-77452792 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 83, 72 |
| Conread position: | 287-591 |
| Cow position: | chr3:81167274-81166968 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 211 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 47, 24 |
| Conread position: | 287-595 |
| Cow position: | chr3:15415675-15415983 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 252 |
| Conread position: | 288-595 |
| Cow position: | chr3:12565147-12564832 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 132, 256 |
| Conread position: | 293-592 |
| Cow position: | chr3:82930848-82931149 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 262 |
| Conread position: | 293-595 |
| Cow position: | chr3:65920070-65920360 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 139, 71 |
| Conread position: | 294-594 |
| Cow position: | chr3:6663628-6663928 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 215 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 126, 233 |
| Conread position: | 294-595 |
| Cow position: | chr3:40209258-40208962 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 126, 46 |
| Conread position: | 295-592 |
| Cow position: | chr3:53517813-53518111 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 75 |
| Conread position: | 297-591 |
| Cow position: | chr3:64134571-64134866 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 17, 64 |
| Conread position: | 301-592 |
| Cow position: | chr3:80931213-80930924 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 64, 97 |
| Conread position: | 303-579 |
| Cow position: | chr3:77366854-77366570 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 90, 55 |
| Conread position: | 308-563 |
| Cow position: | chr3:7950241-7949984 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 95, 144 |
| Conread position: | 310-595 |
| Cow position: | chr3:19125532-19125813 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 113, 33 |
| Conread position: | 312-593 |
| Cow position: | chr3:82362862-82363150 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 67, 53 |
| Conread position: | 313-587 |
| Cow position: | chr3:38002358-38002624 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 59, 27 |
| Conread position: | 313-589 |
| Cow position: | chr3:62913320-62913046 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 36, 54 |
| Conread position: | 314-588 |
| Cow position: | chr3:45692752-45692484 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 106, 23 |
| Conread position: | 317-561 |
| Cow position: | chr3:61555393-61555151 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 106, 65 |
| Conread position: | 335-595 |
| Cow position: | chr3:29580918-29581183 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 336-595 |
| Cow position: | chr3:6713265-6713526 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 24, 30 |
| Conread position: | 337-567 |
| Cow position: | chr3:53392626-53392390 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 86, 33 |
| Conread position: | 340-593 |
| Cow position: | chr3:49335471-49335716 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 82, 69 |
| Conread position: | 340-593 |
| Cow position: | chr3:71144672-71144417 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 80, 100 |
| Conread position: | 342-595 |
| Cow position: | chr3:34458606-34458349 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 186 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 344-549 |
| Cow position: | chr3:39080790-39080998 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 18, 28 |
| Conread position: | 345-595 |
| Cow position: | chr3:32491581-32491835 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 185 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 346-595 |
| Cow position: | chr3:19882740-19882993 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 348-595 |
| Cow position: | chr3:6382503-6382754 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 349-582 |
| Cow position: | chr3:46387660-46387884 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 74, 35 |
| Conread position: | 365-593 |
| Cow position: | chr3:38491737-38491968 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 20 |
| Conread position: | 366-564 |
| Cow position: | chr3:26752144-26751946 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 57, 84 |
| Conread position: | 369-595 |
| Cow position: | chr3:48361220-48361447 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 57, 217 |
| Conread position: | 370-595 |
| Cow position: | chr3:24264489-24264719 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 371-592 |
| Cow position: | chr3:32218105-32218328 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 55, 25 |
| Conread position: | 377-599 |
| Cow position: | chr3:59331749-59331977 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 209 |
| Conread position: | 391-595 |
| Cow position: | chr3:49561402-49561198 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 32, 18 |
| Conread position: | 401-592 |
| Cow position: | chr3:46807492-46807688 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 13, 113 |
| Conread position: | 403-591 |
| Cow position: | chr3:79592461-79592653 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 19, 113 |
| Conread position: | 408-593 |
| Cow position: | chr3:12664264-12664448 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 30, 130 |
| Conread position: | 410-595 |
| Cow position: | chr3:33635743-33635927 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 13, 125 |
| Conread position: | 412-595 |
| Cow position: | chr3:2920577-2920764 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 425-595 |
| Cow position: | chr3:4289111-4288938 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 426-593 |
| Cow position: | chr3:37658312-37658481 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 435-595 |
| Cow position: | chr3:39871815-39871657 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 146, 82 |
| Conread position: | 438-593 |
| Cow position: | chr3:61276952-61277108 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 438-595 |
| Cow position: | chr3:6837677-6837521 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 142, 54 |
| Conread position: | 438-595 |
| Cow position: | chr3:44926185-44926339 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 140, 103 |
| Conread position: | 445-596 |
| Cow position: | chr3:5421511-5421359 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 449-592 |
| Cow position: | chr3:77621324-77621469 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 26, 46 |
| Conread position: | 452-595 |
| Cow position: | chr3:26683284-26683140 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 128, 0 |
Show alignments to all cow chromosomes.