Cow genome map

Conread name: Ss1.1-rlin14_p8.5

Conread position: 1-121
Cow position:
Alignm length: 121
Alignm identity: 99
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 1-164
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 1-164
Cow position:
Alignm length: 164
Alignm identity: 119
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 3-127
Cow position:
Alignm length: 129
Alignm identity: 108
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 3-129
Cow position:
Alignm length: 129
Alignm identity: 100
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 86, 32

Conread position: 3-131
Cow position:
Alignm length: 129
Alignm identity: 101
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 109, 0

Conread position: 3-131
Cow position:
Alignm length: 129
Alignm identity: 104
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 3-137
Cow position:
Alignm length: 135
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 3-151
Cow position:
Alignm length: 149
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-157
Cow position:
Alignm length: 155
Alignm identity: 121
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 3-157
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 35, 75

Conread position: 3-163
Cow position:
Alignm length: 161
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 3-164
Cow position:
Alignm length: 163
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 3-164
Cow position:
Alignm length: 162
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 3-164
Cow position:
Alignm length: 162
Alignm identity: 117
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 3-164
Cow position:
Alignm length: 167
Alignm identity: 123
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 4-130
Cow position:
Alignm length: 127
Alignm identity: 103
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 4-136
Cow position:
Alignm length: 133
Alignm identity: 104
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 78, 0

Conread position: 4-153
Cow position:
Alignm length: 150
Alignm identity: 109
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 4-153
Cow position:
Alignm length: 150
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 4-153
Cow position:
Alignm length: 150
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 4-155
Cow position:
Alignm length: 152
Alignm identity: 109
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 4-156
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 19, 74

Conread position: 4-156
Cow position:
Alignm length: 154
Alignm identity: 122
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 106, 0

Conread position: 4-157
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 79, 0

Conread position: 4-157
Cow position:
Alignm length: 154
Alignm identity: 111
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 4-158
Cow position:
Alignm length: 155
Alignm identity: 118
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 4-159
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 4-160
Cow position:
Alignm length: 157
Alignm identity: 122
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 26, 0

Conread position: 4-160
Cow position:
Alignm length: 157
Alignm identity: 123
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 4-161
Cow position:
Alignm length: 158
Alignm identity: 120
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 4-162
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 94, 82

Conread position: 4-162
Cow position:
Alignm length: 160
Alignm identity: 115
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 142, 71

Conread position: 4-162
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 4-163
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 114, 0

Conread position: 4-163
Cow position:
Alignm length: 163
Alignm identity: 123
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 4-164
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 86, 0

Conread position: 4-164
Cow position:
Alignm length: 161
Alignm identity: 123
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 4-164
Cow position:
Alignm length: 161
Alignm identity: 126
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 4-164
Cow position:
Alignm length: 161
Alignm identity: 129
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 4-164
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 110, 0

Conread position: 4-164
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 71, 0

Conread position: 4-164
Cow position:
Alignm length: 161
Alignm identity: 124
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 4-164
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 4-164
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 4-164
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 4-164
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 83, 0

Conread position: 4-164
Cow position:
Alignm length: 161
Alignm identity: 127
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 76, 0

Conread position: 4-167
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 83, 130

Conread position: 4-167
Cow position:
Alignm length: 166
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 133, 54

Conread position: 4-167
Cow position:
Alignm length: 168
Alignm identity: 123
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 97, 23

Conread position: 5-161
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 5-164
Cow position:
Alignm length: 160
Alignm identity: 124
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 76, 0

Conread position: 5-164
Cow position:
Alignm length: 160
Alignm identity: 114
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 5-164
Cow position:
Alignm length: 165
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 93, 0

Conread position: 6-151
Cow position:
Alignm length: 146
Alignm identity: 111
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 6-153
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 6-159
Cow position:
Alignm length: 154
Alignm identity: 120
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 72, 0

Conread position: 6-164
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 78, 0

Conread position: 7-158
Cow position:
Alignm length: 152
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 7-163
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 80, 42

Conread position: 7-164
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 7-164
Cow position:
Alignm length: 158
Alignm identity: 123
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 44, 0

Conread position: 7-167
Cow position:
Alignm length: 161
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 8-160
Cow position:
Alignm length: 154
Alignm identity: 120
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 147, 79

Conread position: 8-164
Cow position:
Alignm length: 157
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 8-164
Cow position:
Alignm length: 157
Alignm identity: 122
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 9-166
Cow position:
Alignm length: 158
Alignm identity: 120
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 15-162
Cow position:
Alignm length: 148
Alignm identity: 110
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 19-162
Cow position:
Alignm length: 145
Alignm identity: 108
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 68, 63

Conread position: 27-162
Cow position:
Alignm length: 136
Alignm identity: 107
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 27-164
Cow position:
Alignm length: 138
Alignm identity: 109
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 85, 0

Conread position: 29-164
Cow position:
Alignm length: 136
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 36-142
Cow position:
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 49-163
Cow position:
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 56-167
Cow position:
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 32

Show alignments to all cow chromosomes.