Cow genome map


           Conread name:
           Ss1.1-rlin14_p8.5
        

               Conread position:
               1-142
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               3-131
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-144
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               3-144
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               3-162
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               3-163
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               90, 41
               

               Conread position:
               3-163
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               35, 27
               

               Conread position:
               3-164
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               41, 89
               

               Conread position:
               3-164
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               4-115
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-124
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-127
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               4-130
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-132
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               117, 79
               

               Conread position:
               4-135
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               4-149
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               4-149
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-153
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               4-157
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-157
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               4-157
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               4-159
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-163
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-163
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               4-163
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               92, 32
               

               Conread position:
               4-163
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               4-164
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               4-164
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               4-164
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               85, 78
               

               Conread position:
               4-164
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               4-167
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               24, 81
               

               Conread position:
               4-168
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               162, 74
               

               Conread position:
               5-163
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               6-149
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               6-162
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               131, 81
               

               Conread position:
               6-164
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               37, 77
               

               Conread position:
               6-164
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               56, 79
               

               Conread position:
               6-164
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               6-167
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               7-157
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               7-167
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               38, 43
               

               Conread position:
               7-167
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               8-142
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               8-165
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               14-159
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               16-170
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               103, 66
               

               Conread position:
               17-144
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               18-168
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               27-166
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               60, 0
               
Show alignments to all cow chromosomes.