Cow genome map

Conread name: Ss1.1-rlin14_p8.5

Conread position: 1-144
Cow position: chr18:21140019-21139875 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 1-159
Cow position: chr18:48458791-48458634 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 3-130
Cow position: chr18:7592780-7592649 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 47, 8

Conread position: 3-148
Cow position: chr18:48036932-48036789 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 3-163
Cow position: chr18:44493371-44493527 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 79, 0

Conread position: 3-164
Cow position: chr18:26373035-26372875 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 3-165
Cow position: chr18:2438647-2438809 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 3-168
Cow position: chr18:50700799-50700637 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 152, 66

Conread position: 4-116
Cow position: chr18:14520150-14520038 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 4-144
Cow position: chr18:248701-248841 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 4-144
Cow position: chr18:28297751-28297888 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 4-156
Cow position: chr18:51271631-51271790 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 4-157
Cow position: chr18:22411498-22411650 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 4-157
Cow position: chr18:24855730-24855882 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 78, 0

Conread position: 4-157
Cow position: chr18:56302008-56301854 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 33, 50

Conread position: 4-159
Cow position: chr18:6158027-6157877 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 34

Conread position: 4-161
Cow position: chr18:16726762-16726608 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 78, 0

Conread position: 4-163
Cow position: chr18:43113835-43113987 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 42, 0

Conread position: 4-164
Cow position: chr18:15689400-15689241 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 127
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 146, 0

Conread position: 4-164
Cow position: chr18:16298219-16298060 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 4-164
Cow position: chr18:16841938-16842104 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 78, 0

Conread position: 4-164
Cow position: chr18:20126991-20127151 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 4-164
Cow position: chr18:23714757-23714929 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 4-164
Cow position: chr18:32909161-32909004 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 141, 63

Conread position: 4-164
Cow position: chr18:45961159-45961317 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 19, 0

Conread position: 4-167
Cow position: chr18:38126336-38126497 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 151, 59

Conread position: 5-142
Cow position: chr18:48717828-48717961 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 123, 40

Conread position: 5-157
Cow position: chr18:29796315-29796467 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-162
Cow position: chr18:26842985-26843142 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-164
Cow position: chr18:51298592-51298437 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 6-163
Cow position: chr18:6075279-6075440 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 6-164
Cow position: chr18:33842973-33843131 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 123, 81

Conread position: 7-153
Cow position: chr18:21681868-21682007 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 17, 0

Conread position: 8-127
Cow position: chr18:44408528-44408408 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 111, 78

Conread position: 8-164
Cow position: chr18:32773988-32773833 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 67, 0

Conread position: 9-162
Cow position: chr18:16134205-16134356 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 10-153
Cow position: chr18:23425026-23424888 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 72, 0

Conread position: 17-159
Cow position: chr18:25002789-25002929 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 105
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 53, 0

Conread position: 18-163
Cow position: chr18:1495403-1495259 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 27-149
Cow position: chr18:35360058-35359936 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 103
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 34-162
Cow position: chr18:21575070-21574942 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 96
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.