Cow genome map
| Conread name: | Ss1.1-rlin14_p8.5 |
| Conread position: | 1-149 |
| Cow position: | chr19:47783624-47783774 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 102, 41 |
| Conread position: | 1-164 |
| Cow position: | chr19:38871207-38871045 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 2-164 |
| Cow position: | chr19:3080605-3080438 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 2-164 |
| Cow position: | chr19:46713780-46713613 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 3-127 |
| Cow position: | chr19:50786404-50786523 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 3-140 |
| Cow position: | chr19:1153343-1153206 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-157 |
| Cow position: | chr19:10557190-10557036 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-157 |
| Cow position: | chr19:10970953-10971114 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 3-159 |
| Cow position: | chr19:31984512-31984667 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 117, 39 |
| Conread position: | 3-164 |
| Cow position: | chr19:36461391-36461552 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 47, 85 |
| Conread position: | 3-164 |
| Cow position: | chr19:40026797-40026953 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 4-127 |
| Cow position: | chr19:54817398-54817521 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-131 |
| Cow position: | chr19:42102462-42102587 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 4-132 |
| Cow position: | chr19:11759093-11759221 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-144 |
| Cow position: | chr19:5986371-5986231 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-153 |
| Cow position: | chr19:22932413-22932561 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 4-157 |
| Cow position: | chr19:11876565-11876716 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 4-159 |
| Cow position: | chr19:9387770-9387617 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 4-164 |
| Cow position: | chr19:30935639-30935794 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 4-164 |
| Cow position: | chr19:35345064-35344903 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 4-167 |
| Cow position: | chr19:4824846-4825009 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 157, 144 |
| Conread position: | 4-167 |
| Cow position: | chr19:20291957-20292118 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 4-168 |
| Cow position: | chr19:9092676-9092837 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 4-172 |
| Cow position: | chr19:5648531-5648697 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 122, 45 |
| Conread position: | 5-132 |
| Cow position: | chr19:12040753-12040626 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-167 |
| Cow position: | chr19:32214931-32214774 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 6-156 |
| Cow position: | chr19:26003480-26003631 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 6-164 |
| Cow position: | chr19:31126931-31126774 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 7-164 |
| Cow position: | chr19:17020416-17020257 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 8-119 |
| Cow position: | chr19:22013981-22013867 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 8-152 |
| Cow position: | chr19:46498065-46497926 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 16-137 |
| Cow position: | chr19:42896581-42896463 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 7, 0 |
Show alignments to all cow chromosomes.