Cow genome map

Conread name: Ss1.1-rlin14_p8.5

Conread position: 1-153
Cow position: chr22:6574891-6574738 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 109, 41

Conread position: 3-131
Cow position: chr22:8397682-8397811 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 3-131
Cow position: chr22:29090257-29090387 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 43

Conread position: 3-137
Cow position: chr22:37554372-37554502 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 3-141
Cow position: chr22:26184016-26184154 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-148
Cow position: chr22:14509328-14509477 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 3-149
Cow position: chr22:27224276-27224126 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 5, 0

Conread position: 3-156
Cow position: chr22:33592289-33592439 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 81

Conread position: 3-157
Cow position: chr22:10553536-10553694 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 3-157
Cow position: chr22:25477191-25477039 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 130, 0

Conread position: 3-164
Cow position: chr22:1081933-1081772 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-164
Cow position: chr22:5384797-5384639 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 22

Conread position: 3-164
Cow position: chr22:16234299-16234138 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-164
Cow position: chr22:28672298-28672129 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 3-164
Cow position: chr22:39983052-39983212 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 84, 0

Conread position: 3-164
Cow position: chr22:41245399-41245232 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 126, 87

Conread position: 4-120
Cow position: chr22:16897843-16897959 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 90
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 4-121
Cow position: chr22:25168149-25168263 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 4-126
Cow position: chr22:27469049-27468928 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 106, 97

Conread position: 4-127
Cow position: chr22:19069228-19069110 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 4-127
Cow position: chr22:32690297-32690418 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 4-132
Cow position: chr22:43873201-43873073 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 78, 38

Conread position: 4-142
Cow position: chr22:44468948-44468810 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 118, 78

Conread position: 4-146
Cow position: chr22:5337455-5337595 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 30, 46

Conread position: 4-148
Cow position: chr22:18339795-18339940 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 126, 0

Conread position: 4-152
Cow position: chr22:28685469-28685323 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 4-153
Cow position: chr22:22999735-22999589 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 4-156
Cow position: chr22:17184542-17184694 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 4-157
Cow position: chr22:4036723-4036573 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 112, 0

Conread position: 4-159
Cow position: chr22:41389250-41389097 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 4-163
Cow position: chr22:11778467-11778623 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 40

Conread position: 4-163
Cow position: chr22:19262985-19263147 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 93, 78

Conread position: 4-164
Cow position: chr22:2913420-2913264 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 4-164
Cow position: chr22:4651323-4651161 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 4-164
Cow position: chr22:4753613-4753771 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 52, 0

Conread position: 4-164
Cow position: chr22:7287655-7287494 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 127
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 59, 0

Conread position: 4-164
Cow position: chr22:33386366-33386520 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 4-164
Cow position: chr22:41468392-41468549 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 90, 0

Conread position: 5-127
Cow position: chr22:29256745-29256623 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-164
Cow position: chr22:42612602-42612443 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 6-163
Cow position: chr22:22997618-22997462 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 6-164
Cow position: chr22:15424280-15424120 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 37, 0

Conread position: 6-164
Cow position: chr22:34675661-34675508 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 7-153
Cow position: chr22:876420-876271 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 7-160
Cow position: chr22:26941930-26941782 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 7-164
Cow position: chr22:7301699-7301851 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 8-164
Cow position: chr22:15358385-15358230 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 16-164
Cow position: chr22:7102964-7102818 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 120, 0

Conread position: 21-156
Cow position: chr22:42945920-42946056 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 29-164
Cow position: chr22:23016840-23016973 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 38, 0

Show alignments to all cow chromosomes.