Cow genome map
| Conread name: | Ss1.1-rlin14_p8.5 |
| Conread position: | 1-127 |
| Cow position: | chr23:33927960-33927834 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-153 |
| Cow position: | chr23:17000857-17000708 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-172 |
| Cow position: | chr23:22272325-22272498 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 3-158 |
| Cow position: | chr23:36082735-36082579 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 130, 84 |
| Conread position: | 3-160 |
| Cow position: | chr23:11750984-11751140 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 3-163 |
| Cow position: | chr23:35155524-35155366 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 3-164 |
| Cow position: | chr23:40651322-40651483 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 67, 84 |
| Conread position: | 3-164 |
| Cow position: | chr23:40891513-40891352 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-166 |
| Cow position: | chr23:30308057-30307896 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 4-100 |
| Cow position: | chr23:16072195-16072291 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-114 |
| Cow position: | chr23:18370525-18370636 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 4-148 |
| Cow position: | chr23:35177470-35177324 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 4-149 |
| Cow position: | chr23:347600-347740 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 4-156 |
| Cow position: | chr23:14840363-14840513 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 4-157 |
| Cow position: | chr23:23904178-23904331 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 41, 30 |
| Conread position: | 4-162 |
| Cow position: | chr23:38941770-38941614 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 4-163 |
| Cow position: | chr23:15872543-15872703 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 66, 57 |
| Conread position: | 4-164 |
| Cow position: | chr23:6683898-6683738 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-164 |
| Cow position: | chr23:13359975-13359817 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 4-164 |
| Cow position: | chr23:21847904-21847744 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-164 |
| Cow position: | chr23:29272264-29272105 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 4-165 |
| Cow position: | chr23:26217709-26217554 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 4-167 |
| Cow position: | chr23:28721089-28721246 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 5-125 |
| Cow position: | chr23:24411154-24411034 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-167 |
| Cow position: | chr23:8929992-8930150 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 6-162 |
| Cow position: | chr23:20171728-20171571 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 6-163 |
| Cow position: | chr23:5389846-5389692 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 6-164 |
| Cow position: | chr23:1717402-1717559 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 7-164 |
| Cow position: | chr23:35362636-35362787 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 8-162 |
| Cow position: | chr23:17092352-17092505 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 78, 0 |
Show alignments to all cow chromosomes.