Cow genome map
| Conread name: | Ss1.1-rlin14_p8.5 |
| Conread position: | 1-164 |
| Cow position: | chr25:18448958-18448798 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 3-127 |
| Cow position: | chr25:20614868-20614747 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 3-135 |
| Cow position: | chr25:8080871-8080742 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 3-153 |
| Cow position: | chr25:15025053-15024908 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 3-155 |
| Cow position: | chr25:5365679-5365523 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 3-163 |
| Cow position: | chr25:26457532-26457691 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 3-167 |
| Cow position: | chr25:18000385-18000547 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 4-121 |
| Cow position: | chr25:18228320-18228206 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 4-127 |
| Cow position: | chr25:26652328-26652205 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-131 |
| Cow position: | chr25:20884944-20885068 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 125, 65 |
| Conread position: | 4-153 |
| Cow position: | chr25:18239655-18239506 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 18, 121 |
| Conread position: | 4-154 |
| Cow position: | chr25:17701848-17701998 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 39, 99 |
| Conread position: | 4-157 |
| Cow position: | chr25:36501096-36501250 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 4-158 |
| Cow position: | chr25:14075447-14075295 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 4-159 |
| Cow position: | chr25:12932770-12932616 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 4-163 |
| Cow position: | chr25:20428462-20428306 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 4-164 |
| Cow position: | chr25:13321327-13321167 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-164 |
| Cow position: | chr25:14570516-14570360 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 4-165 |
| Cow position: | chr25:26240683-26240523 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 4-167 |
| Cow position: | chr25:27534774-27534936 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 4-175 |
| Cow position: | chr25:8576837-8576668 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 5-157 |
| Cow position: | chr25:34378962-34379113 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 5-164 |
| Cow position: | chr25:20076641-20076482 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-164 |
| Cow position: | chr25:33204939-33205093 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 5-168 |
| Cow position: | chr25:40956844-40957003 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 6-167 |
| Cow position: | chr25:24405591-24405752 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 149, 86 |
| Conread position: | 7-143 |
| Cow position: | chr25:18266306-18266170 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-153 |
| Cow position: | chr25:13560074-13560215 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 20-144 |
| Cow position: | chr25:395956-395835 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 23, 104 |
Show alignments to all cow chromosomes.