Cow genome map


           Conread name:
           Ss1.1-rlin14_p8.5
        

               Conread position:
               1-131
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               1-153
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               39, 33
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               3-141
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               3-144
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-157
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               3-162
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               3-164
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               4-115
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-124
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               4-149
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               4-149
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               4-153
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               4-155
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               4-156
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-157
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-159
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               4-162
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               4-162
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               100, 78
               

               Conread position:
               4-162
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-163
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               4-164
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               4-164
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               4-164
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               4-164
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               4-164
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               4-164
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-164
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               4-164
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               4-165
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-166
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               39, 160
               

               Conread position:
               4-167
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               4-168
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               5-157
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               141, 29
               

               Conread position:
               6-125
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               6-159
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-162
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               6-164
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               104, 63
               

               Conread position:
               6-167
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               7-136
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               7-141
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               7-162
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               7-163
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               80, 73
               

               Conread position:
               7-164
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               7-164
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               8-167
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               144, 138
               

               Conread position:
               9-164
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               15-156
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               17-140
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               42-168
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               119, 0
               
Show alignments to all cow chromosomes.