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Cow genome map

           
Conread name:
           
Ss1.1-rlin34_d7.5
        

               
Conread position:
               
48-406
               

               
Cow position:
               
chr10:45965699-45965322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
28, 175
               

               
Conread position:
               
50-442
               

               
Cow position:
               
chr10:2849529-2849143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 21
               

               
Conread position:
               
53-408
               

               
Cow position:
               
chr10:26145231-26145601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
77, 58
               

               
Conread position:
               
54-442
               

               
Cow position:
               
chr10:23055896-23056294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 53
               

               
Conread position:
               
54-443
               

               
Cow position:
               
chr10:4311354-4310975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 22
               

               
Conread position:
               
55-439
               

               
Cow position:
               
chr10:62517062-62516667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
9, 75
               

               
Conread position:
               
58-319
               

               
Cow position:
               
chr10:37425943-37426222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
9, 168
               

               
Conread position:
               
59-357
               

               
Cow position:
               
chr10:23026685-23026373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 52
               

               
Conread position:
               
59-357
               

               
Cow position:
               
chr10:65558521-65558820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
71, 55
               

               
Conread position:
               
59-441
               

               
Cow position:
               
chr10:47543251-47542878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 53
               

               
Conread position:
               
59-442
               

               
Cow position:
               
chr10:24753326-24752944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 16
               

               
Conread position:
               
59-442
               

               
Cow position:
               
chr10:37529081-37529481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 160
               

               
Conread position:
               
60-370
               

               
Cow position:
               
chr10:763098-762777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
21, 160
               

               
Conread position:
               
60-442
               

               
Cow position:
               
chr10:31362030-31362423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 18
               

               
Conread position:
               
61-290
               

               
Cow position:
               
chr10:35605232-35604990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
59, 14
               

               
Conread position:
               
61-427
               

               
Cow position:
               
chr10:65071946-65072310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
75, 50
               

               
Conread position:
               
61-442
               

               
Cow position:
               
chr10:20371943-20372343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
62-417
               

               
Cow position:
               
chr10:12315314-12314970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
66, 36
               

               
Conread position:
               
63-291
               

               
Cow position:
               
chr10:9309396-9309158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
43, 15
               

               
Conread position:
               
63-403
               

               
Cow position:
               
chr10:19704342-19704681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
48, 131
               

               
Conread position:
               
64-255
               

               
Cow position:
               
chr10:37400596-37400398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
41, 97
               

               
Conread position:
               
64-411
               

               
Cow position:
               
chr10:21447748-21448081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
113, 15
               

               
Conread position:
               
64-415
               

               
Cow position:
               
chr10:24786276-24785917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
65, 14
               

               
Conread position:
               
64-421
               

               
Cow position:
               
chr10:49046009-49045645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 50
               

               
Conread position:
               
64-439
               

               
Cow position:
               
chr10:22479559-22479936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
67, 14
               

               
Conread position:
               
64-442
               

               
Cow position:
               
chr10:37235362-37235765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 166
               

               
Conread position:
               
64-452
               

               
Cow position:
               
chr10:34661144-34661539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 144
               

               
Conread position:
               
64-452
               

               
Cow position:
               
chr10:63940957-63940553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 14
               

               
Conread position:
               
65-427
               

               
Cow position:
               
chr10:29689166-29689519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
67, 13
               

               
Conread position:
               
65-447
               

               
Cow position:
               
chr10:25342772-25342375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 158
               

               
Conread position:
               
66-281
               

               
Cow position:
               
chr10:10634395-10634169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 12
               

               
Conread position:
               
66-314
               

               
Cow position:
               
chr10:59849593-59849334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
45, 172
               

               
Conread position:
               
66-369
               

               
Cow position:
               
chr10:58451193-58451513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
12, 138
               

               
Conread position:
               
66-393
               

               
Cow position:
               
chr10:30613974-30613673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
112, 12
               

               
Conread position:
               
66-395
               

               
Cow position:
               
chr10:6531982-6532319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
52, 12
               

               
Conread position:
               
66-409
               

               
Cow position:
               
chr10:2704373-2704028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
12, 149
               

               
Conread position:
               
66-411
               

               
Cow position:
               
chr10:2613550-2613183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 12
               

               
Conread position:
               
66-413
               

               
Cow position:
               
chr10:37295501-37295848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 147
               

               
Conread position:
               
66-414
               

               
Cow position:
               
chr10:53179447-53179113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 36
               

               
Conread position:
               
66-417
               

               
Cow position:
               
chr10:49146693-49146334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 152
               

               
Conread position:
               
66-440
               

               
Cow position:
               
chr10:721475-721089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 150
               

               
Conread position:
               
66-441
               

               
Cow position:
               
chr10:37667994-37668372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 40
               

               
Conread position:
               
66-442
               

               
Cow position:
               
chr10:28152214-28152595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 11
               

               
Conread position:
               
66-442
               

               
Cow position:
               
chr10:28721962-28721578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
66-442
               

               
Cow position:
               
chr10:43439039-43438658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
92, 44
               

               
Conread position:
               
66-449
               

               
Cow position:
               
chr10:59572076-59571679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 12
               

               
Conread position:
               
66-452
               

               
Cow position:
               
chr10:15817611-15818018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 147
               

               
Conread position:
               
67-299
               

               
Cow position:
               
chr10:23379312-23379068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
39, 13
               

               
Conread position:
               
67-362
               

               
Cow position:
               
chr10:45623992-45624284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
39, 31
               

               
Conread position:
               
67-412
               

               
Cow position:
               
chr10:56733212-56732851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
53, 156
               

               
Conread position:
               
67-452
               

               
Cow position:
               
chr10:53974001-53973622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 11
               

               
Conread position:
               
68-349
               

               
Cow position:
               
chr10:19099012-19098716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
37, 68
               

               
Conread position:
               
68-358
               

               
Cow position:
               
chr10:11648866-11649165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
38, 148
               

               
Conread position:
               
68-358
               

               
Cow position:
               
chr10:30741539-30741251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
217, 39
               

               
Conread position:
               
68-411
               

               
Cow position:
               
chr10:52589518-52589876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
62, 11
               

               
Conread position:
               
68-439
               

               
Cow position:
               
chr10:19590599-19590974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
55, 39
               

               
Conread position:
               
68-442
               

               
Cow position:
               
chr10:1428189-1427828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 45
               

               
Conread position:
               
68-442
               

               
Cow position:
               
chr10:35904660-35905040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 134
               

               
Conread position:
               
69-438
               

               
Cow position:
               
chr10:50776869-50776494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
110, 42
               

               
Conread position:
               
69-440
               

               
Cow position:
               
chr10:29339235-29339598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
61, 11
               

               
Conread position:
               
70-412
               

               
Cow position:
               
chr10:23096617-23096963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
71-292
               

               
Cow position:
               
chr10:29091187-29091407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
78, 35
               

               
Conread position:
               
71-411
               

               
Cow position:
               
chr10:9288207-9287877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
34, 7
               

               
Conread position:
               
71-411
               

               
Cow position:
               
chr10:28395138-28395483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 26
               

               
Conread position:
               
71-417
               

               
Cow position:
               
chr10:34898137-34897800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
11, 40
               

               
Conread position:
               
72-442
               

               
Cow position:
               
chr10:28176223-28176605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 80
               

               
Conread position:
               
73-371
               

               
Cow position:
               
chr10:48178517-48178218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
33, 62
               

               
Conread position:
               
73-442
               

               
Cow position:
               
chr10:26731490-26731861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
32, 67
               

               
Conread position:
               
73-442
               

               
Cow position:
               
chr10:54477255-54476899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 32
               

               
Conread position:
               
73-442
               

               
Cow position:
               
chr10:56475632-56475257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 139
               

               
Conread position:
               
74-442
               

               
Cow position:
               
chr10:3999067-3998693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 49
               

               
Conread position:
               
75-258
               

               
Cow position:
               
chr10:23478764-23478962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
39, 140
               

               
Conread position:
               
75-296
               

               
Cow position:
               
chr10:1108305-1108528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 30
               

               
Conread position:
               
75-321
               

               
Cow position:
               
chr10:17553337-17553095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
28, 39
               

               
Conread position:
               
75-324
               

               
Cow position:
               
chr10:53365192-53364933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
28, 140
               

               
Conread position:
               
75-361
               

               
Cow position:
               
chr10:58935011-58935302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
31, 65
               

               
Conread position:
               
75-387
               

               
Cow position:
               
chr10:37884637-37884953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
35, 85
               

               
Conread position:
               
75-390
               

               
Cow position:
               
chr10:16683653-16683976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
102, 32
               

               
Conread position:
               
75-395
               

               
Cow position:
               
chr10:33240524-33240845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 35
               

               
Conread position:
               
75-409
               

               
Cow position:
               
chr10:54947968-54948319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
28, 209
               

               
Conread position:
               
75-410
               

               
Cow position:
               
chr10:15871715-15872054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
75-411
               

               
Cow position:
               
chr10:32834987-32834634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
31, 139
               

               
Conread position:
               
75-413
               

               
Cow position:
               
chr10:10124501-10124159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
36, 61
               

               
Conread position:
               
75-413
               

               
Cow position:
               
chr10:48741006-48741345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 30
               

               
Conread position:
               
75-430
               

               
Cow position:
               
chr10:38429394-38429748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
36, 51
               

               
Conread position:
               
75-431
               

               
Cow position:
               
chr10:12486420-12486061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 54
               

               
Conread position:
               
75-439
               

               
Cow position:
               
chr10:8412896-8413261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
70, 25
               

               
Conread position:
               
75-442
               

               
Cow position:
               
chr10:37415958-37415573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 145
               

               
Conread position:
               
75-442
               

               
Cow position:
               
chr10:41408441-41408075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
30, 12
               

               
Conread position:
               
75-456
               

               
Cow position:
               
chr10:37708850-37709263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 142
               

               
Conread position:
               
78-282
               

               
Cow position:
               
chr10:34700788-34700580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
28, 69
               

               
Conread position:
               
78-421
               

               
Cow position:
               
chr10:47773893-47773536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 134
               

               
Conread position:
               
78-440
               

               
Cow position:
               
chr10:30224844-30224473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 92
               

               
Conread position:
               
79-440
               

               
Cow position:
               
chr10:45679172-45678803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
27, 114
               

               
Conread position:
               
80-390
               

               
Cow position:
               
chr10:2201964-2202287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 133
               

               
Conread position:
               
80-394
               

               
Cow position:
               
chr10:38376504-38376818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
26, 46
               

               
Conread position:
               
80-411
               

               
Cow position:
               
chr10:4109749-4109409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 138
               

               
Conread position:
               
80-411
               

               
Cow position:
               
chr10:23948766-23949103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
52, 25
               

               
Conread position:
               
80-421
               

               
Cow position:
               
chr10:9341583-9341926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
51, 25
               

               
Conread position:
               
80-442
               

               
Cow position:
               
chr10:10469134-10468766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 23
               

               
Conread position:
               
80-442
               

               
Cow position:
               
chr10:17863734-17863372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 7
               

               
Conread position:
               
80-442
               

               
Cow position:
               
chr10:39387619-39387248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
25, 141
               

               
Conread position:
               
80-456
               

               
Cow position:
               
chr10:50533707-50534099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 137
               

               
Conread position:
               
84-411
               

               
Cow position:
               
chr10:60388614-60388943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
48, 27
               

               
Conread position:
               
87-452
               

               
Cow position:
               
chr10:10135132-10134756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 39
               

               
Conread position:
               
89-442
               

               
Cow position:
               
chr10:2973945-2974300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 21
               

               
Conread position:
               
91-396
               

               
Cow position:
               
chr10:44764354-44764673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 18
               

               
Conread position:
               
94-411
               

               
Cow position:
               
chr10:4184335-4184008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 16
               

               
Conread position:
               
99-409
               

               
Cow position:
               
chr10:61982514-61982212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
80, 16
               

               
Conread position:
               
104-411
               

               
Cow position:
               
chr10:1070019-1070323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
50, 14
               

               
Conread position:
               
107-341
               

               
Cow position:
               
chr10:6199144-6198910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
52, 100
               

               
Conread position:
               
107-362
               

               
Cow position:
               
chr10:3364056-3364311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 102
               

               
Conread position:
               
109-408
               

               
Cow position:
               
chr10:61588137-61588443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
45, 100
               

               
Conread position:
               
110-442
               

               
Cow position:
               
chr10:59588058-59588379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 44
               

               
Conread position:
               
111-280
               

               
Cow position:
               
chr10:33369903-33369739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
17, 29
               

               
Conread position:
               
112-409
               

               
Cow position:
               
chr10:63884060-63883771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 97
               

               
Conread position:
               
112-410
               

               
Cow position:
               
chr10:54962597-54962906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
55, 33
               

               
Conread position:
               
112-434
               

               
Cow position:
               
chr10:16986450-16986123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 28
               

               
Conread position:
               
112-442
               

               
Cow position:
               
chr10:12392489-12392814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 68
               

               
Conread position:
               
113-400
               

               
Cow position:
               
chr10:533648-533359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
16, 33
               

               
Conread position:
               
113-442
               

               
Cow position:
               
chr10:49923252-49923567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
38, 97
               

               
Conread position:
               
113-456
               

               
Cow position:
               
chr10:59675137-59675480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 39
               

               
Conread position:
               
114-274
               

               
Cow position:
               
chr10:16830265-16830429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
28, 97
               

               
Conread position:
               
114-274
               

               
Cow position:
               
chr10:24574285-24574438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
23, 82
               

               
Conread position:
               
114-440
               

               
Cow position:
               
chr10:6436176-6435849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 29
               

               
Conread position:
               
115-238
               

               
Cow position:
               
chr10:57095084-57095207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
38, 57
               

               
Conread position:
               
115-246
               

               
Cow position:
               
chr10:24971213-24971341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
63, 14
               

               
Conread position:
               
115-250
               

               
Cow position:
               
chr10:58149052-58149188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
29, 93
               

               
Conread position:
               
115-257
               

               
Cow position:
               
chr10:14188494-14188637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 92
               

               
Conread position:
               
115-276
               

               
Cow position:
               
chr10:39258373-39258539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
27, 97
               

               
Conread position:
               
115-276
               

               
Cow position:
               
chr10:52125574-52125729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
39, 15
               

               
Conread position:
               
115-277
               

               
Cow position:
               
chr10:30261488-30261648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
34, 94
               

               
Conread position:
               
115-278
               

               
Cow position:
               
chr10:38205599-38205757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
63, 15
               

               
Conread position:
               
115-280
               

               
Cow position:
               
chr10:47159330-47159166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
64, 25
               

               
Conread position:
               
115-282
               

               
Cow position:
               
chr10:13927851-13927684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
24, 93
               

               
Conread position:
               
115-284
               

               
Cow position:
               
chr10:20133754-20133927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
12, 60
               

               
Conread position:
               
115-284
               

               
Cow position:
               
chr10:38995353-38995176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
115-285
               

               
Cow position:
               
chr10:10153123-10152956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
64, 25
               

               
Conread position:
               
115-285
               

               
Cow position:
               
chr10:54699587-54699759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
115-289
               

               
Cow position:
               
chr10:30929767-30929947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
13, 93
               

               
Conread position:
               
115-290
               

               
Cow position:
               
chr10:32080385-32080217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
62, 31
               

               
Conread position:
               
115-313
               

               
Cow position:
               
chr10:2535685-2535487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
167, 24
               

               
Conread position:
               
115-313
               

               
Cow position:
               
chr10:43586167-43586367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
37, 93
               

               
Conread position:
               
115-314
               

               
Cow position:
               
chr10:55319611-55319409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
64, 25
               

               
Conread position:
               
115-315
               

               
Cow position:
               
chr10:17567986-17568184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
64, 25
               

               
Conread position:
               
115-316
               

               
Cow position:
               
chr10:41676297-41676495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
63, 25
               

               
Conread position:
               
115-320
               

               
Cow position:
               
chr10:23346189-23346390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
63, 24
               

               
Conread position:
               
115-322
               

               
Cow position:
               
chr10:35715469-35715690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
115-322
               

               
Cow position:
               
chr10:46575626-46575419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
64, 27
               

               
Conread position:
               
115-325
               

               
Cow position:
               
chr10:10137978-10137776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
64, 30
               

               
Conread position:
               
115-325
               

               
Cow position:
               
chr10:34646333-34646540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
63, 28
               

               
Conread position:
               
115-338
               

               
Cow position:
               
chr10:46934660-46934889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
20, 97
               

               
Conread position:
               
115-339
               

               
Cow position:
               
chr10:29328280-29328493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
62, 31
               

               
Conread position:
               
115-340
               

               
Cow position:
               
chr10:22888697-22888922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
28, 83
               

               
Conread position:
               
115-340
               

               
Cow position:
               
chr10:61509829-61510047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
63, 15
               

               
Conread position:
               
115-342
               

               
Cow position:
               
chr10:60697511-60697734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
62, 45
               

               
Conread position:
               
115-345
               

               
Cow position:
               
chr10:55395861-55396089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 28
               

               
Conread position:
               
115-350
               

               
Cow position:
               
chr10:46262302-46262071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
215, 64
               

               
Conread position:
               
115-351
               

               
Cow position:
               
chr10:48407256-48407020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
32, 52
               

               
Conread position:
               
115-360
               

               
Cow position:
               
chr10:46327808-46327556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
39, 93
               

               
Conread position:
               
115-363
               

               
Cow position:
               
chr10:37068303-37068548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
173, 39
               

               
Conread position:
               
115-364
               

               
Cow position:
               
chr10:41132380-41132136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
64, 55
               

               
Conread position:
               
115-365
               

               
Cow position:
               
chr10:15309283-15309534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 174
               

               
Conread position:
               
115-368
               

               
Cow position:
               
chr10:60446848-60446592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
63, 46
               

               
Conread position:
               
115-375
               

               
Cow position:
               
chr10:39124253-39123983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
15, 96
               

               
Conread position:
               
115-378
               

               
Cow position:
               
chr10:6384643-6384385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 13
               

               
Conread position:
               
115-379
               

               
Cow position:
               
chr10:42123471-42123746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
34, 97
               

               
Conread position:
               
115-389
               

               
Cow position:
               
chr10:19191871-19191615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
30, 93
               

               
Conread position:
               
115-390
               

               
Cow position:
               
chr10:31528085-31527826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
64, 37
               

               
Conread position:
               
115-394
               

               
Cow position:
               
chr10:38241198-38240917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
24, 95
               

               
Conread position:
               
115-396
               

               
Cow position:
               
chr10:9656407-9656709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
64, 25
               

               
Conread position:
               
115-401
               

               
Cow position:
               
chr10:60236982-60237267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 28
               

               
Conread position:
               
115-407
               

               
Cow position:
               
chr10:58691020-58690713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
73, 23
               

               
Conread position:
               
115-409
               

               
Cow position:
               
chr10:1488946-1488662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 30
               

               
Conread position:
               
115-409
               

               
Cow position:
               
chr10:67626881-67627174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
63, 28
               

               
Conread position:
               
115-410
               

               
Cow position:
               
chr10:40163816-40164116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 83
               

               
Conread position:
               
115-411
               

               
Cow position:
               
chr10:24756529-24756233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 93
               

               
Conread position:
               
115-411
               

               
Cow position:
               
chr10:30522946-30523250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 94
               

               
Conread position:
               
115-411
               

               
Cow position:
               
chr10:45658258-45657961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 23
               

               
Conread position:
               
115-411
               

               
Cow position:
               
chr10:52695609-52695912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 94
               

               
Conread position:
               
115-411
               

               
Cow position:
               
chr10:62353575-62353280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
115-411
               

               
Cow position:
               
chr10:68927265-68926972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
61, 56
               

               
Conread position:
               
115-413
               

               
Cow position:
               
chr10:33914950-33915243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
39, 15
               

               
Conread position:
               
115-421
               

               
Cow position:
               
chr10:19372217-19372527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 95
               

               
Conread position:
               
115-421
               

               
Cow position:
               
chr10:40147512-40147829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
29, 61
               

               
Conread position:
               
115-425
               

               
Cow position:
               
chr10:10120311-10120000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 94
               

               
Conread position:
               
115-425
               

               
Cow position:
               
chr10:50182936-50183247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 91
               

               
Conread position:
               
115-427
               

               
Cow position:
               
chr10:1423950-1423639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
37, 95
               

               
Conread position:
               
115-427
               

               
Cow position:
               
chr10:40738108-40737802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 25
               

               
Conread position:
               
115-427
               

               
Cow position:
               
chr10:50360034-50359721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 79
               

               
Conread position:
               
115-433
               

               
Cow position:
               
chr10:24276610-24276938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 25
               

               
Conread position:
               
115-435
               

               
Cow position:
               
chr10:55733492-55733807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
63, 25
               

               
Conread position:
               
115-437
               

               
Cow position:
               
chr10:25942-25622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 94
               

               
Conread position:
               
115-437
               

               
Cow position:
               
chr10:5543131-5543456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 97
               

               
Conread position:
               
115-437
               

               
Cow position:
               
chr10:24312774-24313096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
64, 25
               

               
Conread position:
               
115-438
               

               
Cow position:
               
chr10:31534856-31534533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 98
               

               
Conread position:
               
115-438
               

               
Cow position:
               
chr10:50332714-50332378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
24, 50
               

               
Conread position:
               
115-438
               

               
Cow position:
               
chr10:61839708-61839391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
47, 28
               

               
Conread position:
               
115-440
               

               
Cow position:
               
chr10:23576658-23576333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
115-440
               

               
Cow position:
               
chr10:30352968-30352634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 25
               

               
Conread position:
               
115-441
               

               
Cow position:
               
chr10:1978554-1978874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
42, 93
               

               
Conread position:
               
115-441
               

               
Cow position:
               
chr10:14947371-14947055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 92
               

               
Conread position:
               
115-441
               

               
Cow position:
               
chr10:35867899-35868212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 97
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr10:1976199-1976532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 94
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr10:5599881-5600206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
14, 99
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr10:6505469-6505149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 94
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr10:10720553-10720888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 95
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr10:16093328-16093003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 94
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr10:16414457-16414798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
37, 58
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr10:16645068-16645406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 77
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr10:17844882-17844547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 21
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr10:20553300-20552969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 24
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr10:21657535-21657208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 36
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr10:22390714-22390377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 93
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr10:23912393-23912708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 95
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr10:24560871-24561200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 28
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr10:33665960-33665628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 16
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr10:34654993-34655323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 30
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr10:35731410-35731738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 93
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr10:35862113-35862442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 15
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr10:37512119-37512460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 95
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr10:37818442-37818772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 15
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr10:38370334-38370674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
14, 60
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr10:42746030-42745701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 15
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr10:45378883-45379220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 99
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr10:45871636-45871301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
34, 97
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr10:48316826-48317168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 97
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr10:48462228-48462550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 15
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr10:52278842-52278515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 140
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr10:53247890-53248219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 36
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr10:54848895-54848565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 93
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr10:56828202-56828533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 30
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr10:57786454-57786125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 11
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr10:67443003-67443317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
63, 74
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr10:69564719-69564390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
28, 58
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr10:69934663-69934989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 93
               

               
Conread position:
               
115-446
               

               
Cow position:
               
chr10:35792045-35791717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 95
               

               
Conread position:
               
115-447
               

               
Cow position:
               
chr10:45476101-45476435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
29, 97
               

               
Conread position:
               
115-449
               

               
Cow position:
               
chr10:16598809-16598470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 96
               

               
Conread position:
               
115-449
               

               
Cow position:
               
chr10:25150004-25149680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 53
               

               
Conread position:
               
115-449
               

               
Cow position:
               
chr10:53907608-53907937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
41, 59
               

               
Conread position:
               
115-450
               

               
Cow position:
               
chr10:6852382-6852052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 95
               

               
Conread position:
               
115-451
               

               
Cow position:
               
chr10:33215913-33215575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 62
               

               
Conread position:
               
115-451
               

               
Cow position:
               
chr10:35245835-35246164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 65
               

               
Conread position:
               
115-452
               

               
Cow position:
               
chr10:15868373-15868013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 99
               

               
Conread position:
               
115-452
               

               
Cow position:
               
chr10:17073249-17073579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 37
               

               
Conread position:
               
115-452
               

               
Cow position:
               
chr10:20095885-20095532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 97
               

               
Conread position:
               
115-452
               

               
Cow position:
               
chr10:21422044-21422374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 57
               

               
Conread position:
               
115-452
               

               
Cow position:
               
chr10:37014755-37014414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 97
               

               
Conread position:
               
115-452
               

               
Cow position:
               
chr10:43487834-43487489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 97
               

               
Conread position:
               
115-452
               

               
Cow position:
               
chr10:44771765-44771434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
40, 15
               

               
Conread position:
               
115-452
               

               
Cow position:
               
chr10:54504721-54504380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 93
               

               
Conread position:
               
115-452
               

               
Cow position:
               
chr10:64285682-64286018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 28
               

               
Conread position:
               
115-453
               

               
Cow position:
               
chr10:1996556-1996888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
62, 11
               

               
Conread position:
               
115-456
               

               
Cow position:
               
chr10:45371175-45370829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 95
               

               
Conread position:
               
115-456
               

               
Cow position:
               
chr10:51306454-51306100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 35
               

               
Conread position:
               
116-369
               

               
Cow position:
               
chr10:6664150-6663886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 92
               

               
Conread position:
               
116-442
               

               
Cow position:
               
chr10:9575932-9576251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 92
               

               
Conread position:
               
116-442
               

               
Cow position:
               
chr10:33195162-33194810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
28, 96
               

               
Conread position:
               
116-452
               

               
Cow position:
               
chr10:13765047-13765386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 95
               

               
Conread position:
               
117-281
               

               
Cow position:
               
chr10:22980864-22981028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
62, 90
               

               
Conread position:
               
117-282
               

               
Cow position:
               
chr10:46886266-46886106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
61, 37
               

               
Conread position:
               
117-285
               

               
Cow position:
               
chr10:23310910-23311081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
30, 94
               

               
Conread position:
               
117-291
               

               
Cow position:
               
chr10:6242402-6242569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
62, 21
               

               
Conread position:
               
117-317
               

               
Cow position:
               
chr10:25466178-25465980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
62, 29
               

               
Conread position:
               
117-347
               

               
Cow position:
               
chr10:63628303-63628058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
22, 36
               

               
Conread position:
               
117-421
               

               
Cow position:
               
chr10:35653784-35653470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
10, 27
               

               
Conread position:
               
117-438
               

               
Cow position:
               
chr10:22341690-22341357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 23
               

               
Conread position:
               
117-442
               

               
Cow position:
               
chr10:13050173-13050505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
17, 91
               

               
Conread position:
               
117-442
               

               
Cow position:
               
chr10:49168919-49169269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 91
               

               
Conread position:
               
117-445
               

               
Cow position:
               
chr10:46150984-46150667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
62, 23
               

               
Conread position:
               
117-449
               

               
Cow position:
               
chr10:35802245-35802587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 181
               

               
Conread position:
               
117-456
               

               
Cow position:
               
chr10:59839173-59839511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 19
               

               
Conread position:
               
118-441
               

               
Cow position:
               
chr10:65133057-65132748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
119-315
               

               
Cow position:
               
chr10:51727312-51727499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 21
               

               
Conread position:
               
119-340
               

               
Cow position:
               
chr10:19539703-19539932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
21, 95
               

               
Conread position:
               
119-369
               

               
Cow position:
               
chr10:27118849-27119108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
35, 83
               

               
Conread position:
               
119-442
               

               
Cow position:
               
chr10:6408070-6407744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
61, 42
               

               
Conread position:
               
119-442
               

               
Cow position:
               
chr10:10148764-10148438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 91
               

               
Conread position:
               
119-442
               

               
Cow position:
               
chr10:31027527-31027856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 311
               

               
Conread position:
               
119-442
               

               
Cow position:
               
chr10:36490131-36489807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
60, 21
               

               
Conread position:
               
119-449
               

               
Cow position:
               
chr10:5889644-5889989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 94
               

               
Conread position:
               
119-456
               

               
Cow position:
               
chr10:31400782-31401124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 94
               

               
Conread position:
               
120-253
               

               
Cow position:
               
chr10:31812036-31812168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 83
               

               
Conread position:
               
121-264
               

               
Cow position:
               
chr10:38223448-38223591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
57, 86
               

               
Conread position:
               
121-407
               

               
Cow position:
               
chr10:40107215-40106927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 78
               

               
Conread position:
               
121-409
               

               
Cow position:
               
chr10:21082492-21082203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 89
               

               
Conread position:
               
121-411
               

               
Cow position:
               
chr10:46195896-46195599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
33, 91
               

               
Conread position:
               
123-246
               

               
Cow position:
               
chr10:14541980-14541856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
29, 85
               

               
Conread position:
               
123-268
               

               
Cow position:
               
chr10:17388948-17388803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
12, 46
               

               
Conread position:
               
123-292
               

               
Cow position:
               
chr10:23127877-23128047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
21, 85
               

               
Conread position:
               
123-365
               

               
Cow position:
               
chr10:12919251-12919493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
48, 21
               

               
Conread position:
               
124-289
               

               
Cow position:
               
chr10:50042710-50042550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
18, 9
               

               
Conread position:
               
124-290
               

               
Cow position:
               
chr10:36947083-36947252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
25, 86
               

               
Conread position:
               
124-317
               

               
Cow position:
               
chr10:25185016-25184815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
18, 53
               

               
Conread position:
               
124-318
               

               
Cow position:
               
chr10:55382425-55382229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
25, 86
               

               
Conread position:
               
124-325
               

               
Cow position:
               
chr10:52167284-52167087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
55, 47
               

               
Conread position:
               
124-334
               

               
Cow position:
               
chr10:29526793-29526999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
30, 85
               

               
Conread position:
               
124-345
               

               
Cow position:
               
chr10:53405581-53405363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
29, 83
               

               
Conread position:
               
124-357
               

               
Cow position:
               
chr10:15426973-15427196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
30, 72
               

               
Conread position:
               
124-364
               

               
Cow position:
               
chr10:13316047-13315805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 84
               

               
Conread position:
               
124-380
               

               
Cow position:
               
chr10:42451148-42451390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
30, 83
               

               
Conread position:
               
124-396
               

               
Cow position:
               
chr10:67288397-67288127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
55, 16
               

               
Conread position:
               
124-409
               

               
Cow position:
               
chr10:15318992-15318702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 15
               

               
Conread position:
               
124-412
               

               
Cow position:
               
chr10:17176137-17175850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 22
               

               
Conread position:
               
124-412
               

               
Cow position:
               
chr10:19549378-19549673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 85
               

               
Conread position:
               
124-437
               

               
Cow position:
               
chr10:5151455-5151144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 81
               

               
Conread position:
               
124-440
               

               
Cow position:
               
chr10:46492887-46493213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 83
               

               
Conread position:
               
124-442
               

               
Cow position:
               
chr10:24871274-24870953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 85
               

               
Conread position:
               
124-442
               

               
Cow position:
               
chr10:28670710-28671034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 83
               

               
Conread position:
               
124-442
               

               
Cow position:
               
chr10:31791152-31791471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 85
               

               
Conread position:
               
124-442
               

               
Cow position:
               
chr10:59163999-59164308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
30, 52
               

               
Conread position:
               
124-442
               

               
Cow position:
               
chr10:66194198-66194516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 15
               

               
Conread position:
               
124-452
               

               
Cow position:
               
chr10:13586811-13586492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 83
               

               
Conread position:
               
126-250
               

               
Cow position:
               
chr10:58638119-58637995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
53, 81
               

               
Conread position:
               
126-256
               

               
Cow position:
               
chr10:52061925-52061796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
28, 60
               

               
Conread position:
               
126-262
               

               
Cow position:
               
chr10:27178598-27178465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
18, 61
               

               
Conread position:
               
126-281
               

               
Cow position:
               
chr10:55600051-55600206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
28, 42
               

               
Conread position:
               
126-284
               

               
Cow position:
               
chr10:41116011-41115852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
19, 82
               

               
Conread position:
               
126-285
               

               
Cow position:
               
chr10:23923115-23922954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
15, 76
               

               
Conread position:
               
126-287
               

               
Cow position:
               
chr10:10027677-10027519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
26, 82
               

               
Conread position:
               
126-290
               

               
Cow position:
               
chr10:28429398-28429561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
51, 81
               

               
Conread position:
               
126-290
               

               
Cow position:
               
chr10:49253468-49253308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
54, 81
               

               
Conread position:
               
126-294
               

               
Cow position:
               
chr10:30121512-30121343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 82
               

               
Conread position:
               
126-299
               

               
Cow position:
               
chr10:33371492-33371311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
22, 83
               

               
Conread position:
               
126-307
               

               
Cow position:
               
chr10:24902878-24903062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
28, 84
               

               
Conread position:
               
126-320
               

               
Cow position:
               
chr10:30746776-30746595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
126-325
               

               
Cow position:
               
chr10:60491160-60491350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
18, 69
               

               
Conread position:
               
126-341
               

               
Cow position:
               
chr10:67581391-67581169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
28, 82
               

               
Conread position:
               
126-356
               

               
Cow position:
               
chr10:7383508-7383739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
52, 81
               

               
Conread position:
               
126-369
               

               
Cow position:
               
chr10:9578852-9579107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
28, 82
               

               
Conread position:
               
126-370
               

               
Cow position:
               
chr10:69997692-69997945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
31, 84
               

               
Conread position:
               
126-390
               

               
Cow position:
               
chr10:41626699-41626427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
28, 62
               

               
Conread position:
               
126-406
               

               
Cow position:
               
chr10:28178718-28178987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
18, 34
               

               
Conread position:
               
126-407
               

               
Cow position:
               
chr10:39109909-39110184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
23, 89
               

               
Conread position:
               
126-412
               

               
Cow position:
               
chr10:25699755-25699468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 83
               

               
Conread position:
               
126-421
               

               
Cow position:
               
chr10:22396359-22396058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 83
               

               
Conread position:
               
126-421
               

               
Cow position:
               
chr10:47651405-47651109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 82
               

               
Conread position:
               
126-430
               

               
Cow position:
               
chr10:29102240-29102535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
32, 45
               

               
Conread position:
               
126-438
               

               
Cow position:
               
chr10:38015984-38015683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 10
               

               
Conread position:
               
126-440
               

               
Cow position:
               
chr10:34174870-34175206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 83
               

               
Conread position:
               
126-440
               

               
Cow position:
               
chr10:62286664-62286341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 17
               

               
Conread position:
               
126-441
               

               
Cow position:
               
chr10:11213219-11212901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 83
               

               
Conread position:
               
126-442
               

               
Cow position:
               
chr10:77476-77178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 70
               

               
Conread position:
               
126-442
               

               
Cow position:
               
chr10:668972-668670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
28, 81
               

               
Conread position:
               
126-442
               

               
Cow position:
               
chr10:6489979-6489654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 83
               

               
Conread position:
               
126-442
               

               
Cow position:
               
chr10:8404320-8403997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 28
               

               
Conread position:
               
126-442
               

               
Cow position:
               
chr10:11081071-11080746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 83
               

               
Conread position:
               
126-442
               

               
Cow position:
               
chr10:22616534-22616855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 82
               

               
Conread position:
               
126-442
               

               
Cow position:
               
chr10:23506385-23506697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 74
               

               
Conread position:
               
126-442
               

               
Cow position:
               
chr10:24375650-24375337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 81
               

               
Conread position:
               
126-442
               

               
Cow position:
               
chr10:41802788-41803108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 17
               

               
Conread position:
               
126-442
               

               
Cow position:
               
chr10:55122913-55122578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 82
               

               
Conread position:
               
126-442
               

               
Cow position:
               
chr10:58259423-58259727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 17
               

               
Conread position:
               
126-442
               

               
Cow position:
               
chr10:64182550-64182238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
28, 72
               

               
Conread position:
               
126-452
               

               
Cow position:
               
chr10:7817214-7816886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 82
               

               
Conread position:
               
126-452
               

               
Cow position:
               
chr10:11248086-11247751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
126-452
               

               
Cow position:
               
chr10:57142111-57142433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 29
               

               
Conread position:
               
126-456
               

               
Cow position:
               
chr10:29252268-29251936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 14
               

               
Conread position:
               
127-283
               

               
Cow position:
               
chr10:24830976-24831135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
52, 12
               

               
Conread position:
               
127-321
               

               
Cow position:
               
chr10:35893801-35893997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
15, 80
               

               
Conread position:
               
127-341
               

               
Cow position:
               
chr10:56180670-56180459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
8, 82
               

               
Conread position:
               
127-395
               

               
Cow position:
               
chr10:47725055-47724780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
19, 84
               

               
Conread position:
               
127-418
               

               
Cow position:
               
chr10:50558821-50559118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 25
               

               
Conread position:
               
127-421
               

               
Cow position:
               
chr10:59010030-59010330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 81
               

               
Conread position:
               
127-442
               

               
Cow position:
               
chr10:2304278-2304590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
57, 16
               

               
Conread position:
               
127-442
               

               
Cow position:
               
chr10:9083410-9083087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
14, 84
               

               
Conread position:
               
127-442
               

               
Cow position:
               
chr10:10751889-10752192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 19
               

               
Conread position:
               
127-442
               

               
Cow position:
               
chr10:15293367-15293059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 19
               

               
Conread position:
               
127-442
               

               
Cow position:
               
chr10:20132423-20132740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 81
               

               
Conread position:
               
127-442
               

               
Cow position:
               
chr10:24732408-24732098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 80
               

               
Conread position:
               
127-442
               

               
Cow position:
               
chr10:52296600-52296285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 81
               

               
Conread position:
               
127-442
               

               
Cow position:
               
chr10:62219935-62219612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
52, 13
               

               
Conread position:
               
127-442
               

               
Cow position:
               
chr10:66127953-66127646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
53, 19
               

               
Conread position:
               
127-451
               

               
Cow position:
               
chr10:33067471-33067790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
15, 81
               

               
Conread position:
               
128-244
               

               
Cow position:
               
chr10:12253325-12253442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
50, 24
               

               
Conread position:
               
128-325
               

               
Cow position:
               
chr10:17925969-17926170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
26, 85
               

               
Conread position:
               
128-387
               

               
Cow position:
               
chr10:6543829-6543563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 79
               

               
Conread position:
               
128-388
               

               
Cow position:
               
chr10:2538196-2537934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
15, 75
               

               
Conread position:
               
128-442
               

               
Cow position:
               
chr10:22472429-22472103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 80
               

               
Conread position:
               
128-452
               

               
Cow position:
               
chr10:6530291-6529977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
25, 81
               

               
Conread position:
               
129-298
               

               
Cow position:
               
chr10:40744218-40744047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
20, 82
               

               
Conread position:
               
130-249
               

               
Cow position:
               
chr10:17448097-17448216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 77
               

               
Conread position:
               
130-358
               

               
Cow position:
               
chr10:52881518-52881750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
30, 22
               

               
Conread position:
               
130-369
               

               
Cow position:
               
chr10:53076216-53075980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
14, 78
               

               
Conread position:
               
130-375
               

               
Cow position:
               
chr10:33116849-33117098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
24, 80
               

               
Conread position:
               
130-409
               

               
Cow position:
               
chr10:30787526-30787795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
24, 41
               

               
Conread position:
               
130-411
               

               
Cow position:
               
chr10:6235348-6235611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
47, 24
               

               
Conread position:
               
130-425
               

               
Cow position:
               
chr10:9675361-9675656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
35, 78
               

               
Conread position:
               
130-438
               

               
Cow position:
               
chr10:26631508-26631225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
47, 69
               

               
Conread position:
               
130-440
               

               
Cow position:
               
chr10:64042185-64041872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 41
               

               
Conread position:
               
130-442
               

               
Cow position:
               
chr10:6665457-6665758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
48, 77
               

               
Conread position:
               
130-442
               

               
Cow position:
               
chr10:6986568-6986237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
32, 78
               

               
Conread position:
               
130-442
               

               
Cow position:
               
chr10:8093216-8093527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 57
               

               
Conread position:
               
130-442
               

               
Cow position:
               
chr10:24022181-24022495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 68
               

               
Conread position:
               
130-447
               

               
Cow position:
               
chr10:51289351-51289037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 77
               

               
Conread position:
               
130-452
               

               
Cow position:
               
chr10:26209145-26209483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 78
               

               
Conread position:
               
130-456
               

               
Cow position:
               
chr10:35902854-35903171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 77
               

               
Conread position:
               
131-284
               

               
Cow position:
               
chr10:2695062-2694912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
46, 33
               

               
Conread position:
               
131-325
               

               
Cow position:
               
chr10:23583469-23583661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
31, 77
               

               
Conread position:
               
131-354
               

               
Cow position:
               
chr10:49947780-49948005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
46, 75
               

               
Conread position:
               
131-365
               

               
Cow position:
               
chr10:45295043-45295277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
48, 9
               

               
Conread position:
               
131-387
               

               
Cow position:
               
chr10:17022464-17022723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
14, 81
               

               
Conread position:
               
131-402
               

               
Cow position:
               
chr10:4164369-4164093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 21
               

               
Conread position:
               
131-407
               

               
Cow position:
               
chr10:50015897-50016183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 77
               

               
Conread position:
               
131-408
               

               
Cow position:
               
chr10:34430124-34430400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 77
               

               
Conread position:
               
131-432
               

               
Cow position:
               
chr10:31779169-31779474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 21
               

               
Conread position:
               
131-435
               

               
Cow position:
               
chr10:35778800-35779110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 76
               

               
Conread position:
               
131-441
               

               
Cow position:
               
chr10:19895494-19895188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 76
               

               
Conread position:
               
131-441
               

               
Cow position:
               
chr10:52046971-52046651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 76
               

               
Conread position:
               
131-442
               

               
Cow position:
               
chr10:15115716-15115403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 153
               

               
Conread position:
               
131-442
               

               
Cow position:
               
chr10:29919739-29920045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
131-442
               

               
Cow position:
               
chr10:40420749-40421057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
131-452
               

               
Cow position:
               
chr10:39875053-39875367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 76
               

               
Conread position:
               
131-456
               

               
Cow position:
               
chr10:22049354-22049027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 10
               

               
Conread position:
               
131-456
               

               
Cow position:
               
chr10:43509101-43508769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 77
               

               
Conread position:
               
132-388
               

               
Cow position:
               
chr10:31116774-31116527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
12, 45
               

               
Conread position:
               
132-446
               

               
Cow position:
               
chr10:6642990-6642664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
23, 281
               

               
Conread position:
               
132-452
               

               
Cow position:
               
chr10:24132723-24133042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 76
               

               
Conread position:
               
132-453
               

               
Cow position:
               
chr10:31373990-31374321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 39
               

               
Conread position:
               
133-361
               

               
Cow position:
               
chr10:4151636-4151413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
47, 7
               

               
Conread position:
               
133-396
               

               
Cow position:
               
chr10:68182857-68183110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
44, 10
               

               
Conread position:
               
133-411
               

               
Cow position:
               
chr10:27828419-27828147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
45, 7
               

               
Conread position:
               
133-442
               

               
Cow position:
               
chr10:6252393-6252696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
18, 10
               

               
Conread position:
               
133-442
               

               
Cow position:
               
chr10:35752865-35753172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
46, 10
               

               
Conread position:
               
133-442
               

               
Cow position:
               
chr10:48257180-48257492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
133-442
               

               
Cow position:
               
chr10:49846874-49846564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
11, 75
               

               
Conread position:
               
134-340
               

               
Cow position:
               
chr10:30216608-30216814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
50, 12
               

               
Conread position:
               
134-340
               

               
Cow position:
               
chr10:42230890-42230683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 73
               

               
Conread position:
               
134-421
               

               
Cow position:
               
chr10:22433812-22434113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 31
               

               
Conread position:
               
134-442
               

               
Cow position:
               
chr10:20997191-20997489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 12
               

               
Conread position:
               
134-442
               

               
Cow position:
               
chr10:53674924-53674611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 74
               

               
Conread position:
               
134-446
               

               
Cow position:
               
chr10:47690484-47690178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 9
               

               
Conread position:
               
135-325
               

               
Cow position:
               
chr10:54819363-54819174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
19, 73
               

               
Conread position:
               
135-442
               

               
Cow position:
               
chr10:11966751-11967057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 72
               

               
Conread position:
               
136-407
               

               
Cow position:
               
chr10:11221797-11221524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
43, 7
               

               
Conread position:
               
138-411
               

               
Cow position:
               
chr10:51696835-51696558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 70
               

               
Conread position:
               
139-283
               

               
Cow position:
               
chr10:32127861-32127711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
141-442
               

               
Cow position:
               
chr10:39398427-39398730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
37, 20
               

               
Conread position:
               
142-380
               

               
Cow position:
               
chr10:48087977-48087735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
22, 32
               

               
Conread position:
               
143-322
               

               
Cow position:
               
chr10:13918171-13918341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 66
               

               
Conread position:
               
143-409
               

               
Cow position:
               
chr10:58612553-58612799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
257, 34
               

               
Conread position:
               
145-291
               

               
Cow position:
               
chr10:31400260-31400112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
34, 62
               

               
Conread position:
               
145-401
               

               
Cow position:
               
chr10:55621768-55622019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
131, 62
               

               
Conread position:
               
145-409
               

               
Cow position:
               
chr10:50044557-50044831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
35, 46
               

               
Conread position:
               
145-414
               

               
Cow position:
               
chr10:11463579-11463853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 63
               

               
Conread position:
               
145-442
               

               
Cow position:
               
chr10:22321609-22321307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 62
               

               
Conread position:
               
145-452
               

               
Cow position:
               
chr10:10043021-10043315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 62
               

               
Conread position:
               
145-452
               

               
Cow position:
               
chr10:20897374-20897081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
33, 53
               

               
Conread position:
               
146-442
               

               
Cow position:
               
chr10:24763568-24763267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
147-322
               

               
Cow position:
               
chr10:24980933-24981104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
147-411
               

               
Cow position:
               
chr10:51861994-51862257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
31, 59
               

               
Conread position:
               
147-418
               

               
Cow position:
               
chr10:68829200-68829471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
32, 63
               

               
Conread position:
               
147-442
               

               
Cow position:
               
chr10:37913103-37913397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
31, 60
               

               
Conread position:
               
148-250
               

               
Cow position:
               
chr10:25193062-25192960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
30, 59
               

               
Conread position:
               
148-421
               

               
Cow position:
               
chr10:60961018-60960746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 59
               

               
Conread position:
               
148-442
               

               
Cow position:
               
chr10:37173363-37173665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
31, 59
               

               
Conread position:
               
148-455
               

               
Cow position:
               
chr10:10048753-10048458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
33, 13
               

               
Conread position:
               
149-359
               

               
Cow position:
               
chr10:52120819-52120608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
30, 58
               

               
Conread position:
               
149-417
               

               
Cow position:
               
chr10:42637316-42637030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
14, 57
               

               
Conread position:
               
149-421
               

               
Cow position:
               
chr10:63276475-63276196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 57
               

               
Conread position:
               
149-442
               

               
Cow position:
               
chr10:53357978-53357686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 52
               

               
Conread position:
               
150-291
               

               
Cow position:
               
chr10:40159760-40159902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
28, 57
               

               
Conread position:
               
152-250
               

               
Cow position:
               
chr10:13158193-13158094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
14, 56
               

               
Conread position:
               
152-278
               

               
Cow position:
               
chr10:48898745-48898619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
25, 55
               

               
Conread position:
               
152-282
               

               
Cow position:
               
chr10:29349693-29349561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
25, 55
               

               
Conread position:
               
152-283
               

               
Cow position:
               
chr10:22480365-22480235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
27, 55
               

               
Conread position:
               
152-287
               

               
Cow position:
               
chr10:704916-705051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
25, 55
               

               
Conread position:
               
152-290
               

               
Cow position:
               
chr10:5739199-5739335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
26, 54
               

               
Conread position:
               
152-291
               

               
Cow position:
               
chr10:20485480-20485618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 55
               

               
Conread position:
               
152-291
               

               
Cow position:
               
chr10:67260450-67260587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
131, 24
               

               
Conread position:
               
152-312
               

               
Cow position:
               
chr10:43272965-43273127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
25, 55
               

               
Conread position:
               
152-318
               

               
Cow position:
               
chr10:13197752-13197919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
27, 55
               

               
Conread position:
               
152-321
               

               
Cow position:
               
chr10:17293352-17293522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
27, 55
               

               
Conread position:
               
152-322
               

               
Cow position:
               
chr10:517362-517202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
25, 55
               

               
Conread position:
               
152-345
               

               
Cow position:
               
chr10:49345856-49345673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
25, 48
               

               
Conread position:
               
152-348
               

               
Cow position:
               
chr10:34660163-34660362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
27, 55
               

               
Conread position:
               
152-357
               

               
Cow position:
               
chr10:31004942-31005148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
134, 27
               

               
Conread position:
               
152-359
               

               
Cow position:
               
chr10:8449584-8449367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
152-359
               

               
Cow position:
               
chr10:10750171-10750384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
25, 55
               

               
Conread position:
               
152-378
               

               
Cow position:
               
chr10:22633546-22633775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
26, 55
               

               
Conread position:
               
152-382
               

               
Cow position:
               
chr10:25260327-25260099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
26, 32
               

               
Conread position:
               
152-385
               

               
Cow position:
               
chr10:66593022-66593260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
28, 19
               

               
Conread position:
               
152-404
               

               
Cow position:
               
chr10:69587599-69587856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
30, 55
               

               
Conread position:
               
152-407
               

               
Cow position:
               
chr10:28105000-28105262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 55
               

               
Conread position:
               
152-409
               

               
Cow position:
               
chr10:20391365-20391627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
28, 55
               

               
Conread position:
               
152-411
               

               
Cow position:
               
chr10:22527822-22528087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 56
               

               
Conread position:
               
152-411
               

               
Cow position:
               
chr10:28776430-28776171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 55
               

               
Conread position:
               
152-411
               

               
Cow position:
               
chr10:48573600-48573875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
26, 57
               

               
Conread position:
               
152-411
               

               
Cow position:
               
chr10:50134724-50134990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 55
               

               
Conread position:
               
152-411
               

               
Cow position:
               
chr10:53336324-53336589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
25, 56
               

               
Conread position:
               
152-413
               

               
Cow position:
               
chr10:52113594-52113855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 55
               

               
Conread position:
               
152-417
               

               
Cow position:
               
chr10:22567371-22567632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
27, 48
               

               
Conread position:
               
152-421
               

               
Cow position:
               
chr10:59151785-59152057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 55
               

               
Conread position:
               
152-427
               

               
Cow position:
               
chr10:51942868-51942590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 55
               

               
Conread position:
               
152-441
               

               
Cow position:
               
chr10:38513254-38512963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
25, 43
               

               
Conread position:
               
152-442
               

               
Cow position:
               
chr10:8934550-8934275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
26, 37
               

               
Conread position:
               
152-442
               

               
Cow position:
               
chr10:18042259-18041973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 55
               

               
Conread position:
               
152-442
               

               
Cow position:
               
chr10:29166352-29166066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 55
               

               
Conread position:
               
152-442
               

               
Cow position:
               
chr10:30440967-30441257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
27, 55
               

               
Conread position:
               
152-442
               

               
Cow position:
               
chr10:33732793-33733081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 52
               

               
Conread position:
               
152-442
               

               
Cow position:
               
chr10:36002277-36001991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 55
               

               
Conread position:
               
152-442
               

               
Cow position:
               
chr10:49456014-49456288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
26, 18
               

               
Conread position:
               
152-442
               

               
Cow position:
               
chr10:53934673-53934953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 55
               

               
Conread position:
               
152-442
               

               
Cow position:
               
chr10:57059202-57059497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 53
               

               
Conread position:
               
152-442
               

               
Cow position:
               
chr10:58718732-58718441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
27, 178
               

               
Conread position:
               
152-442
               

               
Cow position:
               
chr10:59843829-59844135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
27, 55
               

               
Conread position:
               
152-452
               

               
Cow position:
               
chr10:3362706-3362397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
26, 55
               

               
Conread position:
               
152-452
               

               
Cow position:
               
chr10:23936556-23936261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 55
               

               
Conread position:
               
152-452
               

               
Cow position:
               
chr10:28841037-28840731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 127
               

               
Conread position:
               
152-452
               

               
Cow position:
               
chr10:42312983-42312686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 58
               

               
Conread position:
               
152-452
               

               
Cow position:
               
chr10:54731091-54730789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 44
               

               
Conread position:
               
152-456
               

               
Cow position:
               
chr10:13390968-13391279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 55
               

               
Conread position:
               
153-325
               

               
Cow position:
               
chr10:973211-973048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
25, 8
               

               
Conread position:
               
153-341
               

               
Cow position:
               
chr10:36107339-36107525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
26, 54
               

               
Conread position:
               
153-356
               

               
Cow position:
               
chr10:32973127-32973334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
25, 55
               

               
Conread position:
               
153-362
               

               
Cow position:
               
chr10:69216441-69216242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
24, 56
               

               
Conread position:
               
153-442
               

               
Cow position:
               
chr10:1749663-1749363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
27, 56
               

               
Conread position:
               
153-442
               

               
Cow position:
               
chr10:6719977-6719690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 55
               

               
Conread position:
               
153-442
               

               
Cow position:
               
chr10:8923358-8923062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 54
               

               
Conread position:
               
154-314
               

               
Cow position:
               
chr10:15225038-15224884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 51
               

               
Conread position:
               
154-318
               

               
Cow position:
               
chr10:15425127-15424969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
23, 53
               

               
Conread position:
               
154-347
               

               
Cow position:
               
chr10:33084363-33084550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
24, 53
               

               
Conread position:
               
154-393
               

               
Cow position:
               
chr10:44421828-44422064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
23, 51
               

               
Conread position:
               
154-405
               

               
Cow position:
               
chr10:46184817-46184572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
23, 53
               

               
Conread position:
               
154-407
               

               
Cow position:
               
chr10:39228225-39227966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 53
               

               
Conread position:
               
154-409
               

               
Cow position:
               
chr10:29279523-29279260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 53
               

               
Conread position:
               
154-411
               

               
Cow position:
               
chr10:35796259-35796506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
23, 53
               

               
Conread position:
               
154-411
               

               
Cow position:
               
chr10:38014443-38014183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 16
               

               
Conread position:
               
154-430
               

               
Cow position:
               
chr10:65423827-65424101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
166, 53
               

               
Conread position:
               
154-442
               

               
Cow position:
               
chr10:13311810-13311520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 53
               

               
Conread position:
               
154-442
               

               
Cow position:
               
chr10:44730401-44730693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
25, 53
               

               
Conread position:
               
154-442
               

               
Cow position:
               
chr10:47412029-47412320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 55
               

               
Conread position:
               
154-442
               

               
Cow position:
               
chr10:51944439-51944150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 53
               

               
Conread position:
               
154-445
               

               
Cow position:
               
chr10:57461434-57461138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 53
               

               
Conread position:
               
155-411
               

               
Cow position:
               
chr10:59663895-59664156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 52
               

               
Conread position:
               
155-438
               

               
Cow position:
               
chr10:21424604-21424892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
24, 15
               

               
Conread position:
               
155-446
               

               
Cow position:
               
chr10:2449427-2449137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 52
               

               
Conread position:
               
155-450
               

               
Cow position:
               
chr10:35901390-35901109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
24, 46
               

               
Conread position:
               
155-452
               

               
Cow position:
               
chr10:41941488-41941802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 143
               

               
Conread position:
               
156-330
               

               
Cow position:
               
chr10:37768380-37768205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
22, 51
               

               
Conread position:
               
156-383
               

               
Cow position:
               
chr10:47789094-47788873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
22, 51
               

               
Conread position:
               
156-411
               

               
Cow position:
               
chr10:55849423-55849173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
22, 51
               

               
Conread position:
               
156-442
               

               
Cow position:
               
chr10:11009485-11009210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
21, 51
               

               
Conread position:
               
156-456
               

               
Cow position:
               
chr10:33163799-33163483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
157-421
               

               
Cow position:
               
chr10:28038859-28039130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 14
               

               
Conread position:
               
158-438
               

               
Cow position:
               
chr10:24548321-24548050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
162, 17
               

               
Conread position:
               
158-442
               

               
Cow position:
               
chr10:38725728-38725448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 51
               

               
Conread position:
               
161-320
               

               
Cow position:
               
chr10:48282481-48282641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
19, 46
               

               
Conread position:
               
161-341
               

               
Cow position:
               
chr10:60962491-60962302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
5, 48
               

               
Conread position:
               
161-388
               

               
Cow position:
               
chr10:39586787-39587020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
17, 47
               

               
Conread position:
               
161-405
               

               
Cow position:
               
chr10:5264881-5264643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
161-414
               

               
Cow position:
               
chr10:32583982-32583725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
161-442
               

               
Cow position:
               
chr10:36896475-36896193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 48
               

               
Conread position:
               
161-442
               

               
Cow position:
               
chr10:50609617-50609326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
163-299
               

               
Cow position:
               
chr10:68208320-68208178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
163-323
               

               
Cow position:
               
chr10:23390246-23390406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
15, 44
               

               
Conread position:
               
163-330
               

               
Cow position:
               
chr10:9526036-9526196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
14, 44
               

               
Conread position:
               
163-417
               

               
Cow position:
               
chr10:32417422-32417165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
14, 44
               

               
Conread position:
               
164-379
               

               
Cow position:
               
chr10:21923453-21923672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 43
               

               
Conread position:
               
164-440
               

               
Cow position:
               
chr10:24781256-24780979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 43
               

               
Conread position:
               
165-316
               

               
Cow position:
               
chr10:37707152-37707003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
165-452
               

               
Cow position:
               
chr10:45770110-45769818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 14
               

               
Conread position:
               
166-415
               

               
Cow position:
               
chr10:42892905-42893152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 41
               

               
Conread position:
               
166-442
               

               
Cow position:
               
chr10:805255-804983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 18
               

               
Conread position:
               
167-418
               

               
Cow position:
               
chr10:54469329-54469584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 40
               

               
Conread position:
               
167-442
               

               
Cow position:
               
chr10:10964052-10963775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 40
               

               
Conread position:
               
168-282
               

               
Cow position:
               
chr10:24151827-24151937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 39
               

               
Conread position:
               
168-286
               

               
Cow position:
               
chr10:13578277-13578159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
9, 39
               

               
Conread position:
               
168-337
               

               
Cow position:
               
chr10:22708262-22708101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
9, 39
               

               
Conread position:
               
168-341
               

               
Cow position:
               
chr10:52069421-52069599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
9, 39
               

               
Conread position:
               
168-411
               

               
Cow position:
               
chr10:21462306-21462054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 39
               

               
Conread position:
               
168-411
               

               
Cow position:
               
chr10:38518564-38518815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
11, 41
               

               
Conread position:
               
168-411
               

               
Cow position:
               
chr10:48255161-48255407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
11, 41
               

               
Conread position:
               
168-415
               

               
Cow position:
               
chr10:13617590-13617834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
9, 39
               

               
Conread position:
               
168-417
               

               
Cow position:
               
chr10:37645123-37644885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
11, 39
               

               
Conread position:
               
168-433
               

               
Cow position:
               
chr10:51314069-51313794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
85, 38
               

               
Conread position:
               
168-438
               

               
Cow position:
               
chr10:26620498-26620759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
11, 27
               

               
Conread position:
               
168-439
               

               
Cow position:
               
chr10:31855398-31855119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
41, 22
               

               
Conread position:
               
168-440
               

               
Cow position:
               
chr10:35887333-35887616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
11, 35
               

               
Conread position:
               
168-443
               

               
Cow position:
               
chr10:6038276-6038548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
11, 23
               

               
Conread position:
               
168-452
               

               
Cow position:
               
chr10:24744609-24744326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 39
               

               
Conread position:
               
168-452
               

               
Cow position:
               
chr10:30455767-30456078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
10, 251
               

               
Conread position:
               
168-456
               

               
Cow position:
               
chr10:29588776-29589066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 37
               

               
Conread position:
               
169-353
               

               
Cow position:
               
chr10:12100481-12100674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
8, 40
               

               
Conread position:
               
169-374
               

               
Cow position:
               
chr10:28623619-28623414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
10, 40
               

               
Conread position:
               
169-409
               

               
Cow position:
               
chr10:32029773-32030014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 26
               

               
Conread position:
               
169-442
               

               
Cow position:
               
chr10:49038647-49038350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
8, 45
               

               
Conread position:
               
170-322
               

               
Cow position:
               
chr10:47182507-47182654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
9, 37
               

               
Conread position:
               
170-359
               

               
Cow position:
               
chr10:25913736-25913926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
9, 37
               

               
Conread position:
               
170-442
               

               
Cow position:
               
chr10:23886398-23886661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 37
               

               
Conread position:
               
170-442
               

               
Cow position:
               
chr10:24745181-24744916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
9, 37
               

               
Conread position:
               
170-442
               

               
Cow position:
               
chr10:38133422-38133695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
10, 37
               

               
Conread position:
               
170-452
               

               
Cow position:
               
chr10:40906375-40906089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
10, 33
               

               
Conread position:
               
170-452
               

               
Cow position:
               
chr10:65749013-65748732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
9, 30
               

               
Conread position:
               
171-430
               

               
Cow position:
               
chr10:20109880-20110138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
18, 27
               

               
Conread position:
               
171-439
               

               
Cow position:
               
chr10:8219345-8219073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
123, 28
               

               
Conread position:
               
171-442
               

               
Cow position:
               
chr10:17837012-17836737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
8, 36
               

               
Conread position:
               
172-409
               

               
Cow position:
               
chr10:41984830-41985069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
45, 5
               

               
Conread position:
               
173-364
               

               
Cow position:
               
chr10:36531670-36531868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
7, 35
               

               
Conread position:
               
173-369
               

               
Cow position:
               
chr10:48679210-48679405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
153, 5
               

               
Conread position:
               
173-387
               

               
Cow position:
               
chr10:21015929-21016149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
173-418
               

               
Cow position:
               
chr10:55801361-55801105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
173-442
               

               
Cow position:
               
chr10:8277611-8277330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
7, 36
               

               
Conread position:
               
175-401
               

               
Cow position:
               
chr10:4198029-4197822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
196, 29
               

               
Conread position:
               
175-411
               

               
Cow position:
               
chr10:24307868-24308095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
143, 108
               

               
Conread position:
               
175-411
               

               
Cow position:
               
chr10:60722104-60722332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
144, 9
               

               
Conread position:
               
176-442
               

               
Cow position:
               
chr10:52569646-52569380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
105, 30
               

               
Conread position:
               
177-407
               

               
Cow position:
               
chr10:41254520-41254750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 29
               

               
Conread position:
               
177-411
               

               
Cow position:
               
chr10:55930251-55930011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
147, 29
               

               
Conread position:
               
177-417
               

               
Cow position:
               
chr10:35767036-35767272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
143, 29
               

               
Conread position:
               
177-431
               

               
Cow position:
               
chr10:66199657-66199906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
147, 29
               

               
Conread position:
               
177-435
               

               
Cow position:
               
chr10:27749726-27749470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
133, 29
               

               
Conread position:
               
177-438
               

               
Cow position:
               
chr10:38155508-38155251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
52, 18
               

               
Conread position:
               
178-367
               

               
Cow position:
               
chr10:50421779-50421591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
119, 7
               

               
Conread position:
               
178-368
               

               
Cow position:
               
chr10:12651884-12651697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
141, 28
               

               
Conread position:
               
178-432
               

               
Cow position:
               
chr10:65071364-65071105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
142, 28
               

               
Conread position:
               
179-322
               

               
Cow position:
               
chr10:53428929-53428787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
179-351
               

               
Cow position:
               
chr10:33881732-33881906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
145, 27
               

               
Conread position:
               
179-356
               

               
Cow position:
               
chr10:49942520-49942344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
179-364
               

               
Cow position:
               
chr10:24004415-24004606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
122, 27
               

               
Conread position:
               
179-364
               

               
Cow position:
               
chr10:64092710-64092881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
179-374
               

               
Cow position:
               
chr10:2899725-2899535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
144, 27
               

               
Conread position:
               
179-407
               

               
Cow position:
               
chr10:15462543-15462310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 27
               

               
Conread position:
               
179-411
               

               
Cow position:
               
chr10:46829917-46829689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
102, 27
               

               
Conread position:
               
179-418
               

               
Cow position:
               
chr10:48513030-48513274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 27
               

               
Conread position:
               
179-430
               

               
Cow position:
               
chr10:4148541-4148276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
102, 27
               

               
Conread position:
               
179-437
               

               
Cow position:
               
chr10:8412041-8411789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
79, 27
               

               
Conread position:
               
179-437
               

               
Cow position:
               
chr10:24096321-24096586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
127, 27
               

               
Conread position:
               
179-439
               

               
Cow position:
               
chr10:29188304-29188570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
142, 27
               

               
Conread position:
               
179-442
               

               
Cow position:
               
chr10:27716789-27717053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
142, 27
               

               
Conread position:
               
179-442
               

               
Cow position:
               
chr10:31466798-31466532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
156, 27
               

               
Conread position:
               
179-442
               

               
Cow position:
               
chr10:53084221-53083953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
90, 27
               

               
Conread position:
               
179-442
               

               
Cow position:
               
chr10:66211240-66211510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
142, 7
               

               
Conread position:
               
179-446
               

               
Cow position:
               
chr10:44783398-44783125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
27, 90
               

               
Conread position:
               
179-452
               

               
Cow position:
               
chr10:10985452-10985717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
142, 27
               

               
Conread position:
               
179-456
               

               
Cow position:
               
chr10:5503071-5502798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
28, 103
               

               
Conread position:
               
180-416
               

               
Cow position:
               
chr10:747520-747276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
89, 26
               

               
Conread position:
               
180-442
               

               
Cow position:
               
chr10:2462439-2462690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
144, 26
               

               
Conread position:
               
180-442
               

               
Cow position:
               
chr10:38942482-38942214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
79, 26
               

               
Conread position:
               
180-442
               

               
Cow position:
               
chr10:57033750-57034002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
144, 28
               

               
Conread position:
               
180-456
               

               
Cow position:
               
chr10:23500180-23500442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
185, 26
               

               
Conread position:
               
181-364
               

               
Cow position:
               
chr10:55063940-55063757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
119, 25
               

               
Conread position:
               
181-364
               

               
Cow position:
               
chr10:67728806-67728993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
121, 25
               

               
Conread position:
               
181-434
               

               
Cow position:
               
chr10:11623965-11623717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
140, 25
               

               
Conread position:
               
181-442
               

               
Cow position:
               
chr10:13163399-13163659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
131, 25
               

               
Conread position:
               
181-442
               

               
Cow position:
               
chr10:43531316-43531043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
65, 25
               

               
Conread position:
               
181-442
               

               
Cow position:
               
chr10:64876569-64876305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
140, 25
               

               
Conread position:
               
181-452
               

               
Cow position:
               
chr10:11576818-11576547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
141, 25
               

               
Conread position:
               
181-452
               

               
Cow position:
               
chr10:34607611-34607336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
135, 25
               

               
Conread position:
               
181-452
               

               
Cow position:
               
chr10:50109854-50110126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
131, 25
               

               
Conread position:
               
182-442
               

               
Cow position:
               
chr10:56080123-56080386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 24
               

               
Conread position:
               
183-440
               

               
Cow position:
               
chr10:39303799-39304062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 23
               

               
Conread position:
               
185-363
               

               
Cow position:
               
chr10:19193645-19193469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
21, 51
               

               
Conread position:
               
185-429
               

               
Cow position:
               
chr10:38421605-38421844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
121, 21
               

               
Conread position:
               
186-427
               

               
Cow position:
               
chr10:29070201-29069961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
138, 20
               

               
Conread position:
               
187-442
               

               
Cow position:
               
chr10:32775143-32774904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
70, 19
               

               
Conread position:
               
187-450
               

               
Cow position:
               
chr10:58399238-58399499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
34, 7
               

               
Conread position:
               
188-359
               

               
Cow position:
               
chr10:34465084-34464911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
98, 18
               

               
Conread position:
               
188-364
               

               
Cow position:
               
chr10:6768668-6768845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
130, 18
               

               
Conread position:
               
188-414
               

               
Cow position:
               
chr10:56683162-56683395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
133, 18
               

               
Conread position:
               
188-435
               

               
Cow position:
               
chr10:47798185-47797937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
182, 18
               

               
Conread position:
               
188-435
               

               
Cow position:
               
chr10:65754913-65755163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
122, 18
               

               
Conread position:
               
188-437
               

               
Cow position:
               
chr10:43314738-43314485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
58, 18
               

               
Conread position:
               
188-442
               

               
Cow position:
               
chr10:33891041-33891299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
133, 18
               

               
Conread position:
               
188-442
               

               
Cow position:
               
chr10:43287830-43288081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
135, 18
               

               
Conread position:
               
188-446
               

               
Cow position:
               
chr10:39939390-39939646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
112, 18
               

               
Conread position:
               
189-453
               

               
Cow position:
               
chr10:37287134-37287400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
100, 17
               

               
Conread position:
               
190-452
               

               
Cow position:
               
chr10:22520120-22520388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 19
               

               
Conread position:
               
192-442
               

               
Cow position:
               
chr10:39268633-39268384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
126, 14
               

               
Conread position:
               
194-442
               

               
Cow position:
               
chr10:14098296-14098533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
129, 12
               

               
Conread position:
               
194-442
               

               
Cow position:
               
chr10:29816639-29816377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
93, 14
               

               
Conread position:
               
195-442
               

               
Cow position:
               
chr10:7366748-7367001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
97, 11
               

               
Conread position:
               
195-442
               

               
Cow position:
               
chr10:21037339-21037094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
205, 17
               

               
Conread position:
               
200-442
               

               
Cow position:
               
chr10:8475888-8475650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
160, 6
               

               
Conread position:
               
205-369
               

               
Cow position:
               
chr10:331407-331236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
205-442
               

               
Cow position:
               
chr10:49569223-49568993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
16, 7
               

               
Conread position:
               
208-454
               

               
Cow position:
               
chr10:35857038-35857278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
209-409
               

               
Cow position:
               
chr10:24422133-24422340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
32, 198
               

               
Conread position:
               
213-442
               

               
Cow position:
               
chr10:69567867-69567642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
113, 25
               

               
Conread position:
               
214-401
               

               
Cow position:
               
chr10:35856339-35856523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
214-442
               

               
Cow position:
               
chr10:1088047-1087807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
72, 164
               

               
Conread position:
               
214-442
               

               
Cow position:
               
chr10:6173375-6173148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 68
               

               
Conread position:
               
214-442
               

               
Cow position:
               
chr10:35975569-35975348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
72, 52
               

               
Conread position:
               
215-365
               

               
Cow position:
               
chr10:55518741-55518579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
215-439
               

               
Cow position:
               
chr10:6012020-6012244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
79, 47
               

               
Conread position:
               
216-442
               

               
Cow position:
               
chr10:17584021-17584241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
78, 124
               

               
Conread position:
               
217-439
               

               
Cow position:
               
chr10:34579986-34580213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
218-439
               

               
Cow position:
               
chr10:25882429-25882217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
102, 17
               

               
Conread position:
               
219-353
               

               
Cow position:
               
chr10:59159083-59159222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
102, 80
               

               
Conread position:
               
219-408
               

               
Cow position:
               
chr10:64838998-64839196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
99, 36
               

               
Conread position:
               
219-411
               

               
Cow position:
               
chr10:47165882-47165687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 74
               

               
Conread position:
               
219-439
               

               
Cow position:
               
chr10:33867386-33867590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
99, 46
               

               
Conread position:
               
219-440
               

               
Cow position:
               
chr10:6516169-6516396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
99, 79
               

               
Conread position:
               
219-442
               

               
Cow position:
               
chr10:31000570-31000813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
219-442
               

               
Cow position:
               
chr10:52175633-52175416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
99, 15
               

               
Conread position:
               
219-442
               

               
Cow position:
               
chr10:61305277-61305069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
146, 64
               

               
Conread position:
               
219-452
               

               
Cow position:
               
chr10:58557202-58556970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
95, 27
               

               
Conread position:
               
220-423
               

               
Cow position:
               
chr10:5607656-5607448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
98, 62
               

               
Conread position:
               
221-441
               

               
Cow position:
               
chr10:55580263-55580478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
77, 95
               

               
Conread position:
               
221-455
               

               
Cow position:
               
chr10:22843696-22843458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
40, 76
               

               
Conread position:
               
222-406
               

               
Cow position:
               
chr10:48408381-48408570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
76, 55
               

               
Conread position:
               
222-442
               

               
Cow position:
               
chr10:20399211-20398987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
68, 169
               

               
Conread position:
               
222-456
               

               
Cow position:
               
chr10:19394580-19394805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
149, 65
               

               
Conread position:
               
223-375
               

               
Cow position:
               
chr10:15750803-15750647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
93, 62
               

               
Conread position:
               
223-386
               

               
Cow position:
               
chr10:46718740-46718905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
75, 52
               

               
Conread position:
               
223-426
               

               
Cow position:
               
chr10:4484666-4484467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
97, 57
               

               
Conread position:
               
223-430
               

               
Cow position:
               
chr10:36231984-36231784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
223-442
               

               
Cow position:
               
chr10:9445011-9445225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
97, 21
               

               
Conread position:
               
223-442
               

               
Cow position:
               
chr10:38739555-38739341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
17, 45
               

               
Conread position:
               
224-365
               

               
Cow position:
               
chr10:24866033-24866172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
94, 58
               

               
Conread position:
               
224-439
               

               
Cow position:
               
chr10:54375429-54375649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
99, 67
               

               
Conread position:
               
226-411
               

               
Cow position:
               
chr10:15294373-15294181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
226-442
               

               
Cow position:
               
chr10:32093811-32093591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
66, 200
               

               
Conread position:
               
227-411
               

               
Cow position:
               
chr10:11032486-11032681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
227-411
               

               
Cow position:
               
chr10:41255989-41255800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
93, 60
               

               
Conread position:
               
227-411
               

               
Cow position:
               
chr10:60358731-60358551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
68, 117
               

               
Conread position:
               
227-435
               

               
Cow position:
               
chr10:25479110-25478894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
227-438
               

               
Cow position:
               
chr10:57563891-57563676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
227-439
               

               
Cow position:
               
chr10:41637653-41637441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
124, 44
               

               
Conread position:
               
227-442
               

               
Cow position:
               
chr10:52029630-52029410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
97, 173
               

               
Conread position:
               
228-364
               

               
Cow position:
               
chr10:37442311-37442169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
228-411
               

               
Cow position:
               
chr10:25618514-25618336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
228-430
               

               
Cow position:
               
chr10:1201938-1201732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
13, 21
               

               
Conread position:
               
228-430
               

               
Cow position:
               
chr10:36285507-36285296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
228-442
               

               
Cow position:
               
chr10:60032566-60032789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 188
               

               
Conread position:
               
228-450
               

               
Cow position:
               
chr10:2191386-2191617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
126, 59
               

               
Conread position:
               
228-456
               

               
Cow position:
               
chr10:37444214-37444442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
90, 169
               

               
Conread position:
               
229-412
               

               
Cow position:
               
chr10:11486975-11487171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
45, 6
               

               
Conread position:
               
230-449
               

               
Cow position:
               
chr10:19094648-19094428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
90, 62
               

               
Conread position:
               
231-442
               

               
Cow position:
               
chr10:57457336-57457120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
89, 60
               

               
Conread position:
               
232-381
               

               
Cow position:
               
chr10:29090686-29090842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
20, 66
               

               
Conread position:
               
232-434
               

               
Cow position:
               
chr10:9798194-9798402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
35, 43
               

               
Conread position:
               
233-407
               

               
Cow position:
               
chr10:11497238-11497068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
61, 38
               

               
Conread position:
               
233-421
               

               
Cow position:
               
chr10:51873699-51873891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
92, 58
               

               
Conread position:
               
234-452
               

               
Cow position:
               
chr10:25475563-25475357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
188, 24
               

               
Conread position:
               
235-442
               

               
Cow position:
               
chr10:37528608-37528817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
85, 56
               

               
Conread position:
               
237-411
               

               
Cow position:
               
chr10:41794712-41794893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
237-442
               

               
Cow position:
               
chr10:34554097-34554300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
85, 54
               

               
Conread position:
               
237-453
               

               
Cow position:
               
chr10:3985423-3985210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
78, 49
               

               
Conread position:
               
238-408
               

               
Cow position:
               
chr10:39140176-39139998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
238-436
               

               
Cow position:
               
chr10:42115250-42115043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
52, 14
               

               
Conread position:
               
238-442
               

               
Cow position:
               
chr10:52152522-52152311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
62, 159
               

               
Conread position:
               
238-452
               

               
Cow position:
               
chr10:19402932-19402713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
49, 189
               

               
Conread position:
               
239-388
               

               
Cow position:
               
chr10:48367049-48367200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
81, 50
               

               
Conread position:
               
239-407
               

               
Cow position:
               
chr10:31812441-31812605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
239-409
               

               
Cow position:
               
chr10:8170242-8170067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
38, 16
               

               
Conread position:
               
239-421
               

               
Cow position:
               
chr10:48500089-48499909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
94, 23
               

               
Conread position:
               
239-421
               

               
Cow position:
               
chr10:50200704-50200517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
85, 42
               

               
Conread position:
               
239-441
               

               
Cow position:
               
chr10:17983176-17982972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
85, 37
               

               
Conread position:
               
239-442
               

               
Cow position:
               
chr10:5113568-5113374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
126, 48
               

               
Conread position:
               
239-442
               

               
Cow position:
               
chr10:18229723-18229932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
89, 48
               

               
Conread position:
               
239-442
               

               
Cow position:
               
chr10:20505538-20505327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
49, 191
               

               
Conread position:
               
239-442
               

               
Cow position:
               
chr10:40924533-40924326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
57, 32
               

               
Conread position:
               
239-452
               

               
Cow position:
               
chr10:48388278-48388489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
81, 48
               

               
Conread position:
               
239-456
               

               
Cow position:
               
chr10:31266340-31266554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
33, 50
               

               
Conread position:
               
241-379
               

               
Cow position:
               
chr10:17602591-17602727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
241-441
               

               
Cow position:
               
chr10:19678864-19678657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
242-347
               

               
Cow position:
               
chr10:7786716-7786605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
242-416
               

               
Cow position:
               
chr10:37400274-37400090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
41, 160
               

               
Conread position:
               
242-439
               

               
Cow position:
               
chr10:28222912-28222719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
83, 42
               

               
Conread position:
               
243-419
               

               
Cow position:
               
chr10:62642983-62642800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
243-440
               

               
Cow position:
               
chr10:65000119-65000324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
57, 108
               

               
Conread position:
               
244-442
               

               
Cow position:
               
chr10:24871878-24871673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
246-442
               

               
Cow position:
               
chr10:20735687-20735496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
98, 40
               

               
Conread position:
               
246-442
               

               
Cow position:
               
chr10:46227078-46226875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
77, 40
               

               
Conread position:
               
246-442
               

               
Cow position:
               
chr10:64878004-64878207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
74, 41
               

               
Conread position:
               
246-446
               

               
Cow position:
               
chr10:19104186-19104392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
74, 34
               

               
Conread position:
               
249-413
               

               
Cow position:
               
chr10:24971628-24971794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
75, 138
               

               
Conread position:
               
249-441
               

               
Cow position:
               
chr10:14975812-14976004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
67, 16
               

               
Conread position:
               
252-441
               

               
Cow position:
               
chr10:25045709-25045893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
74, 38
               

               
Conread position:
               
256-374
               

               
Cow position:
               
chr10:58251863-58251987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
64, 102
               

               
Conread position:
               
256-411
               

               
Cow position:
               
chr10:20447072-20446911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
38, 21
               

               
Conread position:
               
258-409
               

               
Cow position:
               
chr10:69272724-69272572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
52, 29
               

               
Conread position:
               
261-442
               

               
Cow position:
               
chr10:43450942-43451131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
61, 14
               

               
Conread position:
               
261-442
               

               
Cow position:
               
chr10:59675635-59675818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
60, 163
               

               
Conread position:
               
265-442
               

               
Cow position:
               
chr10:1719558-1719739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
55, 42
               

               
Conread position:
               
266-452
               

               
Cow position:
               
chr10:888890-888704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
54, 21
               

               
Conread position:
               
273-441
               

               
Cow position:
               
chr10:34300461-34300296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
98, 21
               

               
Conread position:
               
275-452
               

               
Cow position:
               
chr10:35026436-35026258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
51, 26
               

               
Conread position:
               
277-439
               

               
Cow position:
               
chr10:8077189-8077360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
277-455
               

               
Cow position:
               
chr10:22786853-22786676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
48, 31
               

               
Conread position:
               
280-440
               

               
Cow position:
               
chr10:32174682-32174518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
41, 20
               

               
Conread position:
               
280-442
               

               
Cow position:
               
chr10:54936157-54936324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
38, 21
               

               
Conread position:
               
286-442
               

               
Cow position:
               
chr10:57736214-57736376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
34, 110
               

               
Conread position:
               
287-442
               

               
Cow position:
               
chr10:37822775-37822939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
14, 56
               

               
Conread position:
               
287-442
               

               
Cow position:
               
chr10:48377694-48377857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
291-442
               

               
Cow position:
               
chr10:24153057-24153210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
74, 133
               

               
Conread position:
               
293-442
               

               
Cow position:
               
chr10:47976819-47976676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
129, 24
               

               
Conread position:
               
294-442
               

               
Cow position:
               
chr10:8923878-8923723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
299-456
               

               
Cow position:
               
chr10:15874502-15874665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
301-441
               

               
Cow position:
               
chr10:11282189-11282333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
311-454
               

               
Cow position:
               
chr10:62293918-62293770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
320-437
               

               
Cow position:
               
chr10:65067057-65067172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
50, 101
               

               
Conread position:
               
320-440
               

               
Cow position:
               
chr10:9586610-9586727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
320-440
               

               
Cow position:
               
chr10:32503356-32503240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
51, 93
               

               
Conread position:
               
320-441
               

               
Cow position:
               
chr10:23376555-23376674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
102, 77
               

               
Conread position:
               
320-442
               

               
Cow position:
               
chr10:6345986-6345861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
320-442
               

               
Cow position:
               
chr10:39646195-39646316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
45, 101
               

               
Conread position:
               
320-446
               

               
Cow position:
               
chr10:30106199-30106318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
47, 73
               

               
Conread position:
               
320-452
               

               
Cow position:
               
chr10:30746308-30746179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
102, 84
               

               
Conread position:
               
320-452
               

               
Cow position:
               
chr10:67716894-67716758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
326-442
               

               
Cow position:
               
chr10:35715807-35715922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
328-442
               

               
Cow position:
               
chr10:26607985-26608100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
332-417
               

               
Cow position:
               
chr10:42230556-42230471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
86
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
335-442
               

               
Cow position:
               
chr10:49948177-49948285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
336-456
               

               
Cow position:
               
chr10:5264590-5264474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
350-456
               

               
Cow position:
               
chr10:39123820-39123927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
353-452
               

               
Cow position:
               
chr10:69998070-69998170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               
Show alignments to all cow chromosomes.