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Cow genome map

           
Conread name:
           
Ss1.1-rlin34_d7.5
        

               
Conread position:
               
41-442
               

               
Cow position:
               
chr27:10992096-10992498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 41
               

               
Conread position:
               
46-321
               

               
Cow position:
               
chr27:14269602-14269321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
84, 34
               

               
Conread position:
               
49-446
               

               
Cow position:
               
chr27:27856064-27856482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
18, 179
               

               
Conread position:
               
53-357
               

               
Cow position:
               
chr27:20812658-20812967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 101
               

               
Conread position:
               
54-440
               

               
Cow position:
               
chr27:8353230-8353619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 25
               

               
Conread position:
               
59-452
               

               
Cow position:
               
chr27:4944770-4944374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 164
               

               
Conread position:
               
59-452
               

               
Cow position:
               
chr27:22547651-22547250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 152
               

               
Conread position:
               
60-399
               

               
Cow position:
               
chr27:22386625-22386974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 95
               

               
Conread position:
               
60-401
               

               
Cow position:
               
chr27:4858881-4858540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 79
               

               
Conread position:
               
60-442
               

               
Cow position:
               
chr27:16284230-16284617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 66
               

               
Conread position:
               
61-256
               

               
Cow position:
               
chr27:19741652-19741451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
17, 91
               

               
Conread position:
               
61-427
               

               
Cow position:
               
chr27:15319227-15319580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
265, 56
               

               
Conread position:
               
61-438
               

               
Cow position:
               
chr27:26441288-26440916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
14, 81
               

               
Conread position:
               
61-442
               

               
Cow position:
               
chr27:18543730-18544142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
45, 165
               

               
Conread position:
               
61-442
               

               
Cow position:
               
chr27:19669063-19668644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
45, 164
               

               
Conread position:
               
63-409
               

               
Cow position:
               
chr27:28002059-28001699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
42, 122
               

               
Conread position:
               
64-411
               

               
Cow position:
               
chr27:13005611-13005953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 49
               

               
Conread position:
               
64-412
               

               
Cow position:
               
chr27:20749257-20748893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
41, 110
               

               
Conread position:
               
64-418
               

               
Cow position:
               
chr27:14937666-14937298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
18, 37
               

               
Conread position:
               
64-446
               

               
Cow position:
               
chr27:31373227-31372831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
46, 90
               

               
Conread position:
               
65-399
               

               
Cow position:
               
chr27:29504885-29504543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
12, 40
               

               
Conread position:
               
65-402
               

               
Cow position:
               
chr27:1637180-1636836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
39, 153
               

               
Conread position:
               
65-409
               

               
Cow position:
               
chr27:27050140-27049797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
71, 40
               

               
Conread position:
               
65-411
               

               
Cow position:
               
chr27:12244362-12244017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 42
               

               
Conread position:
               
65-431
               

               
Cow position:
               
chr27:7615327-7614952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
14, 155
               

               
Conread position:
               
65-452
               

               
Cow position:
               
chr27:27613851-27613484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
87, 13
               

               
Conread position:
               
66-438
               

               
Cow position:
               
chr27:26224511-26224128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 64
               

               
Conread position:
               
66-442
               

               
Cow position:
               
chr27:24477173-24477561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 152
               

               
Conread position:
               
66-442
               

               
Cow position:
               
chr27:30890049-30890435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
40, 12
               

               
Conread position:
               
67-391
               

               
Cow position:
               
chr27:20093064-20092742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 11
               

               
Conread position:
               
67-442
               

               
Cow position:
               
chr27:20828957-20828562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 154
               

               
Conread position:
               
68-415
               

               
Cow position:
               
chr27:26218477-26218828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
48, 32
               

               
Conread position:
               
68-442
               

               
Cow position:
               
chr27:19896536-19896901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
111, 24
               

               
Conread position:
               
69-442
               

               
Cow position:
               
chr27:15865981-15866368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
72-442
               

               
Cow position:
               
chr27:19589247-19589620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
70, 31
               

               
Conread position:
               
74-411
               

               
Cow position:
               
chr27:29039166-29038828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
50, 31
               

               
Conread position:
               
75-284
               

               
Cow position:
               
chr27:22245398-22245611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
31, 9
               

               
Conread position:
               
75-341
               

               
Cow position:
               
chr27:2847629-2847893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
55, 35
               

               
Conread position:
               
75-348
               

               
Cow position:
               
chr27:14303512-14303781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
17, 64
               

               
Conread position:
               
75-364
               

               
Cow position:
               
chr27:22225813-22225526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 31
               

               
Conread position:
               
75-396
               

               
Cow position:
               
chr27:20481583-20481276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
10, 33
               

               
Conread position:
               
75-411
               

               
Cow position:
               
chr27:20766178-20765845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
99, 36
               

               
Conread position:
               
75-413
               

               
Cow position:
               
chr27:20283400-20283757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 144
               

               
Conread position:
               
75-427
               

               
Cow position:
               
chr27:8430664-8430311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
57, 30
               

               
Conread position:
               
75-442
               

               
Cow position:
               
chr27:3306542-3306918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 142
               

               
Conread position:
               
75-442
               

               
Cow position:
               
chr27:8962485-8962125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
35, 72
               

               
Conread position:
               
75-442
               

               
Cow position:
               
chr27:15409269-15408899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 141
               

               
Conread position:
               
75-450
               

               
Cow position:
               
chr27:16493361-16493724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
55, 30
               

               
Conread position:
               
78-357
               

               
Cow position:
               
chr27:28260760-28260477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
78-439
               

               
Cow position:
               
chr27:6453986-6454356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
53, 38
               

               
Conread position:
               
78-452
               

               
Cow position:
               
chr27:20553520-20553871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 28
               

               
Conread position:
               
80-388
               

               
Cow position:
               
chr27:24509605-24509910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
97, 31
               

               
Conread position:
               
80-421
               

               
Cow position:
               
chr27:24341682-24342026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
50, 34
               

               
Conread position:
               
80-440
               

               
Cow position:
               
chr27:26643464-26643821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 127
               

               
Conread position:
               
80-442
               

               
Cow position:
               
chr27:14343674-14343323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 69
               

               
Conread position:
               
80-442
               

               
Cow position:
               
chr27:26807787-26807419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
43, 130
               

               
Conread position:
               
80-442
               

               
Cow position:
               
chr27:28190430-28190073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
26, 121
               

               
Conread position:
               
80-443
               

               
Cow position:
               
chr27:25783406-25783747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
75, 128
               

               
Conread position:
               
82-260
               

               
Cow position:
               
chr27:20770753-20770567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
28, 91
               

               
Conread position:
               
82-409
               

               
Cow position:
               
chr27:19544138-19543791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
25, 44
               

               
Conread position:
               
84-401
               

               
Cow position:
               
chr27:12191699-12191383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 129
               

               
Conread position:
               
86-440
               

               
Cow position:
               
chr27:23483017-23483365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
8, 22
               

               
Conread position:
               
87-442
               

               
Cow position:
               
chr27:21393725-21393360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
18, 126
               

               
Conread position:
               
94-441
               

               
Cow position:
               
chr27:28164608-28164267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
214, 200
               

               
Conread position:
               
99-439
               

               
Cow position:
               
chr27:17331300-17331644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 74
               

               
Conread position:
               
101-286
               

               
Cow position:
               
chr27:6674080-6674266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
48, 109
               

               
Conread position:
               
102-442
               

               
Cow position:
               
chr27:22439942-22440284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
47, 33
               

               
Conread position:
               
105-411
               

               
Cow position:
               
chr27:30389493-30389180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
37, 92
               

               
Conread position:
               
109-291
               

               
Cow position:
               
chr27:23147975-23148158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
35, 99
               

               
Conread position:
               
112-363
               

               
Cow position:
               
chr27:20514637-20514889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
67, 40
               

               
Conread position:
               
112-390
               

               
Cow position:
               
chr27:23735781-23736057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
20, 35
               

               
Conread position:
               
114-401
               

               
Cow position:
               
chr27:23594132-23594422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 100
               

               
Conread position:
               
114-451
               

               
Cow position:
               
chr27:21669298-21668971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 40
               

               
Conread position:
               
115-250
               

               
Cow position:
               
chr27:11133902-11134037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
39, 93
               

               
Conread position:
               
115-257
               

               
Cow position:
               
chr27:19576508-19576365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
39, 92
               

               
Conread position:
               
115-261
               

               
Cow position:
               
chr27:17102714-17102858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
62, 37
               

               
Conread position:
               
115-266
               

               
Cow position:
               
chr27:6162589-6162443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
65, 11
               

               
Conread position:
               
115-269
               

               
Cow position:
               
chr27:6106518-6106670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
34, 94
               

               
Conread position:
               
115-274
               

               
Cow position:
               
chr27:24223766-24223930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
34, 94
               

               
Conread position:
               
115-279
               

               
Cow position:
               
chr27:15003165-15002998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
32, 95
               

               
Conread position:
               
115-281
               

               
Cow position:
               
chr27:29388486-29388653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
39, 94
               

               
Conread position:
               
115-282
               

               
Cow position:
               
chr27:26121572-26121743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 96
               

               
Conread position:
               
115-283
               

               
Cow position:
               
chr27:18435316-18435148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
62, 37
               

               
Conread position:
               
115-286
               

               
Cow position:
               
chr27:7343615-7343441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
14, 52
               

               
Conread position:
               
115-289
               

               
Cow position:
               
chr27:9977500-9977675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
48, 11
               

               
Conread position:
               
115-290
               

               
Cow position:
               
chr27:6319737-6319910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
64, 24
               

               
Conread position:
               
115-291
               

               
Cow position:
               
chr27:16512355-16512179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
62, 91
               

               
Conread position:
               
115-293
               

               
Cow position:
               
chr27:8790930-8790747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
19, 95
               

               
Conread position:
               
115-314
               

               
Cow position:
               
chr27:26437306-26437105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
39, 57
               

               
Conread position:
               
115-321
               

               
Cow position:
               
chr27:11561588-11561796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
26, 96
               

               
Conread position:
               
115-325
               

               
Cow position:
               
chr27:19932880-19933089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
28, 55
               

               
Conread position:
               
115-334
               

               
Cow position:
               
chr27:13940742-13940520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
39, 93
               

               
Conread position:
               
115-340
               

               
Cow position:
               
chr27:5553281-5553510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
20, 97
               

               
Conread position:
               
115-340
               

               
Cow position:
               
chr27:23485028-23485252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
63, 93
               

               
Conread position:
               
115-344
               

               
Cow position:
               
chr27:15865424-15865660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
63, 25
               

               
Conread position:
               
115-347
               

               
Cow position:
               
chr27:23859977-23860221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
20, 67
               

               
Conread position:
               
115-359
               

               
Cow position:
               
chr27:15315336-15315569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
64, 25
               

               
Conread position:
               
115-359
               

               
Cow position:
               
chr27:22489086-22489342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
28, 99
               

               
Conread position:
               
115-382
               

               
Cow position:
               
chr27:31219080-31219339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
30, 93
               

               
Conread position:
               
115-390
               

               
Cow position:
               
chr27:24939709-24940005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
52, 15
               

               
Conread position:
               
115-407
               

               
Cow position:
               
chr27:26226474-26226178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 56
               

               
Conread position:
               
115-409
               

               
Cow position:
               
chr27:17995132-17994828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
34, 55
               

               
Conread position:
               
115-409
               

               
Cow position:
               
chr27:20045705-20046000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
27, 98
               

               
Conread position:
               
115-409
               

               
Cow position:
               
chr27:23545513-23545206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
39, 15
               

               
Conread position:
               
115-411
               

               
Cow position:
               
chr27:1768808-1768511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 93
               

               
Conread position:
               
115-411
               

               
Cow position:
               
chr27:6541449-6541745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 25
               

               
Conread position:
               
115-411
               

               
Cow position:
               
chr27:12596596-12596881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
61, 31
               

               
Conread position:
               
115-411
               

               
Cow position:
               
chr27:16103625-16103920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 71
               

               
Conread position:
               
115-411
               

               
Cow position:
               
chr27:16275866-16275558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
27, 192
               

               
Conread position:
               
115-434
               

               
Cow position:
               
chr27:20354414-20354721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
22, 68
               

               
Conread position:
               
115-438
               

               
Cow position:
               
chr27:26490091-26489761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 25
               

               
Conread position:
               
115-441
               

               
Cow position:
               
chr27:28931988-28931644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 95
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr27:426784-427117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 94
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr27:7412208-7412527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 93
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr27:15454026-15454356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 93
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr27:18507461-18507776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
14, 97
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr27:22035557-22035229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 24
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr27:22418950-22418620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 11
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr27:23890747-23891082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 99
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr27:26238838-26239169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 56
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr27:26424762-26424442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
175, 30
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr27:26984166-26984486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
64, 30
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr27:27632781-27632465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
204, 37
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr27:30914821-30915146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
27, 97
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr27:31231265-31230949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
39, 57
               

               
Conread position:
               
115-443
               

               
Cow position:
               
chr27:16705067-16705392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 13
               

               
Conread position:
               
115-443
               

               
Cow position:
               
chr27:26865294-26864973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
64, 78
               

               
Conread position:
               
115-446
               

               
Cow position:
               
chr27:13251838-13252158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 23
               

               
Conread position:
               
115-446
               

               
Cow position:
               
chr27:17397637-17397298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 10
               

               
Conread position:
               
115-446
               

               
Cow position:
               
chr27:22549950-22549632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
65, 27
               

               
Conread position:
               
115-452
               

               
Cow position:
               
chr27:6787772-6788113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
39, 56
               

               
Conread position:
               
115-452
               

               
Cow position:
               
chr27:13411552-13411202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
108, 90
               

               
Conread position:
               
115-452
               

               
Cow position:
               
chr27:15668960-15668612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 97
               

               
Conread position:
               
115-452
               

               
Cow position:
               
chr27:26959800-26959466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
29, 94
               

               
Conread position:
               
115-453
               

               
Cow position:
               
chr27:29494085-29493761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
27, 93
               

               
Conread position:
               
115-455
               

               
Cow position:
               
chr27:22171116-22171456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 8
               

               
Conread position:
               
116-291
               

               
Cow position:
               
chr27:6241378-6241199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
12, 94
               

               
Conread position:
               
116-312
               

               
Cow position:
               
chr27:31210365-31210559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
41, 55
               

               
Conread position:
               
116-409
               

               
Cow position:
               
chr27:27389212-27388910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
28, 97
               

               
Conread position:
               
116-438
               

               
Cow position:
               
chr27:23128280-23128598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
19, 79
               

               
Conread position:
               
116-452
               

               
Cow position:
               
chr27:299561-299229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 15
               

               
Conread position:
               
116-452
               

               
Cow position:
               
chr27:28206619-28206952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 91
               

               
Conread position:
               
117-322
               

               
Cow position:
               
chr27:20584638-20584436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
26, 56
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr27:23560213-23559974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
61, 90
               

               
Conread position:
               
117-363
               

               
Cow position:
               
chr27:26112102-26111841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
25, 95
               

               
Conread position:
               
117-369
               

               
Cow position:
               
chr27:16088619-16088883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 52
               

               
Conread position:
               
117-389
               

               
Cow position:
               
chr27:15378654-15378386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
58, 20
               

               
Conread position:
               
117-390
               

               
Cow position:
               
chr27:7935342-7935060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
16, 94
               

               
Conread position:
               
117-407
               

               
Cow position:
               
chr27:15867209-15867510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
37, 13
               

               
Conread position:
               
117-442
               

               
Cow position:
               
chr27:4835789-4835463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 6
               

               
Conread position:
               
117-442
               

               
Cow position:
               
chr27:23452279-23452624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 91
               

               
Conread position:
               
117-442
               

               
Cow position:
               
chr27:27270724-27270394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 80
               

               
Conread position:
               
117-452
               

               
Cow position:
               
chr27:30764849-30765186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 67
               

               
Conread position:
               
119-442
               

               
Cow position:
               
chr27:29798770-29799088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
20, 93
               

               
Conread position:
               
120-280
               

               
Cow position:
               
chr27:13254978-13254816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
27, 89
               

               
Conread position:
               
121-442
               

               
Cow position:
               
chr27:7731436-7731104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 87
               

               
Conread position:
               
123-416
               

               
Cow position:
               
chr27:22569612-22569893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 20
               

               
Conread position:
               
123-440
               

               
Cow position:
               
chr27:435050-435378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 23
               

               
Conread position:
               
124-284
               

               
Cow position:
               
chr27:788972-788812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
54, 82
               

               
Conread position:
               
124-286
               

               
Cow position:
               
chr27:12710071-12710236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
124-322
               

               
Cow position:
               
chr27:26793957-26793767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
17, 38
               

               
Conread position:
               
124-361
               

               
Cow position:
               
chr27:26407335-26407099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
22, 84
               

               
Conread position:
               
124-389
               

               
Cow position:
               
chr27:23510812-23511084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
55, 27
               

               
Conread position:
               
124-409
               

               
Cow position:
               
chr27:22423341-22423612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
53, 83
               

               
Conread position:
               
124-411
               

               
Cow position:
               
chr27:19546686-19546391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
53, 83
               

               
Conread position:
               
124-411
               

               
Cow position:
               
chr27:27204605-27204301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 30
               

               
Conread position:
               
124-422
               

               
Cow position:
               
chr27:20628891-20629173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
27, 86
               

               
Conread position:
               
124-442
               

               
Cow position:
               
chr27:19717739-19718068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 84
               

               
Conread position:
               
124-442
               

               
Cow position:
               
chr27:27064615-27064295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 86
               

               
Conread position:
               
124-452
               

               
Cow position:
               
chr27:22220379-22220708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
125-411
               

               
Cow position:
               
chr27:26920087-26919786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 84
               

               
Conread position:
               
125-442
               

               
Cow position:
               
chr27:17472638-17472957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
29, 78
               

               
Conread position:
               
126-266
               

               
Cow position:
               
chr27:19452828-19452969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
7, 82
               

               
Conread position:
               
126-267
               

               
Cow position:
               
chr27:26481365-26481227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
53, 14
               

               
Conread position:
               
126-279
               

               
Cow position:
               
chr27:30908500-30908652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
53, 69
               

               
Conread position:
               
126-284
               

               
Cow position:
               
chr27:26090484-26090326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
26, 17
               

               
Conread position:
               
126-287
               

               
Cow position:
               
chr27:30489584-30489422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
28, 82
               

               
Conread position:
               
126-314
               

               
Cow position:
               
chr27:1789312-1789123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 82
               

               
Conread position:
               
126-316
               

               
Cow position:
               
chr27:19508839-19509030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
18, 82
               

               
Conread position:
               
126-352
               

               
Cow position:
               
chr27:25151920-25152135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
16, 52
               

               
Conread position:
               
126-353
               

               
Cow position:
               
chr27:4155826-4156060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
16, 7
               

               
Conread position:
               
126-353
               

               
Cow position:
               
chr27:6015031-6015258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
194, 51
               

               
Conread position:
               
126-356
               

               
Cow position:
               
chr27:6302641-6302398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
28, 76
               

               
Conread position:
               
126-376
               

               
Cow position:
               
chr27:24738973-24738710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
8, 33
               

               
Conread position:
               
126-389
               

               
Cow position:
               
chr27:28896707-28896969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
18, 87
               

               
Conread position:
               
126-406
               

               
Cow position:
               
chr27:31148588-31148871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 83
               

               
Conread position:
               
126-411
               

               
Cow position:
               
chr27:20795619-20795903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 82
               

               
Conread position:
               
126-412
               

               
Cow position:
               
chr27:29236388-29236693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
23, 84
               

               
Conread position:
               
126-414
               

               
Cow position:
               
chr27:22603012-22603290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
28, 82
               

               
Conread position:
               
126-421
               

               
Cow position:
               
chr27:20758203-20757921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
29, 74
               

               
Conread position:
               
126-434
               

               
Cow position:
               
chr27:12516020-12516333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
28, 80
               

               
Conread position:
               
126-438
               

               
Cow position:
               
chr27:19660759-19661085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 81
               

               
Conread position:
               
126-440
               

               
Cow position:
               
chr27:16589876-16589570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 82
               

               
Conread position:
               
126-440
               

               
Cow position:
               
chr27:26509327-26509014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 64
               

               
Conread position:
               
126-441
               

               
Cow position:
               
chr27:24227973-24227650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
28, 82
               

               
Conread position:
               
126-442
               

               
Cow position:
               
chr27:1291022-1290720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
51, 32
               

               
Conread position:
               
126-442
               

               
Cow position:
               
chr27:6550288-6550595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 84
               

               
Conread position:
               
126-442
               

               
Cow position:
               
chr27:7649755-7649438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
53, 81
               

               
Conread position:
               
126-442
               

               
Cow position:
               
chr27:13841196-13841521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
54, 81
               

               
Conread position:
               
126-442
               

               
Cow position:
               
chr27:15643001-15643320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 70
               

               
Conread position:
               
126-442
               

               
Cow position:
               
chr27:27020271-27019956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
28, 83
               

               
Conread position:
               
126-442
               

               
Cow position:
               
chr27:27245527-27245206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
25, 36
               

               
Conread position:
               
126-442
               

               
Cow position:
               
chr27:28467622-28467294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
53, 44
               

               
Conread position:
               
126-442
               

               
Cow position:
               
chr27:28518122-28518430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 82
               

               
Conread position:
               
126-450
               

               
Cow position:
               
chr27:27684286-27683964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
53, 27
               

               
Conread position:
               
126-452
               

               
Cow position:
               
chr27:4386235-4385912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 83
               

               
Conread position:
               
126-452
               

               
Cow position:
               
chr27:10979689-10980018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 82
               

               
Conread position:
               
126-452
               

               
Cow position:
               
chr27:18558189-18558518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 26
               

               
Conread position:
               
126-452
               

               
Cow position:
               
chr27:26426039-26426363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
21, 83
               

               
Conread position:
               
126-456
               

               
Cow position:
               
chr27:13318148-13317796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
28, 82
               

               
Conread position:
               
126-456
               

               
Cow position:
               
chr27:25276970-25277295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 83
               

               
Conread position:
               
126-456
               

               
Cow position:
               
chr27:30988624-30988956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 85
               

               
Conread position:
               
127-253
               

               
Cow position:
               
chr27:17918890-17918763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 81
               

               
Conread position:
               
127-325
               

               
Cow position:
               
chr27:18923007-18922806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
19, 83
               

               
Conread position:
               
127-340
               

               
Cow position:
               
chr27:17918486-17918276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
27, 81
               

               
Conread position:
               
127-359
               

               
Cow position:
               
chr27:7974003-7974238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
12, 129
               

               
Conread position:
               
127-359
               

               
Cow position:
               
chr27:29593803-29593569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
22, 83
               

               
Conread position:
               
127-412
               

               
Cow position:
               
chr27:25809688-25809397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
31, 81
               

               
Conread position:
               
127-434
               

               
Cow position:
               
chr27:2957239-2957543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 81
               

               
Conread position:
               
127-442
               

               
Cow position:
               
chr27:19387847-19388163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 80
               

               
Conread position:
               
127-442
               

               
Cow position:
               
chr27:28922065-28921752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 83
               

               
Conread position:
               
127-442
               

               
Cow position:
               
chr27:30407209-30406887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
51, 80
               

               
Conread position:
               
127-449
               

               
Cow position:
               
chr27:27460742-27460420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 69
               

               
Conread position:
               
128-390
               

               
Cow position:
               
chr27:674202-673949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
8, 45
               

               
Conread position:
               
130-298
               

               
Cow position:
               
chr27:27055119-27055285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
24, 78
               

               
Conread position:
               
130-341
               

               
Cow position:
               
chr27:212786-213004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
14, 116
               

               
Conread position:
               
130-357
               

               
Cow position:
               
chr27:17646336-17646111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 13
               

               
Conread position:
               
130-405
               

               
Cow position:
               
chr27:27694938-27694662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
48, 77
               

               
Conread position:
               
130-407
               

               
Cow position:
               
chr27:24371073-24371347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
14, 66
               

               
Conread position:
               
130-409
               

               
Cow position:
               
chr27:22454946-22454663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 79
               

               
Conread position:
               
130-409
               

               
Cow position:
               
chr27:30359237-30359518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 78
               

               
Conread position:
               
130-421
               

               
Cow position:
               
chr27:27136690-27136393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
15, 78
               

               
Conread position:
               
130-430
               

               
Cow position:
               
chr27:2592372-2592679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 78
               

               
Conread position:
               
130-442
               

               
Cow position:
               
chr27:27641180-27640847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 73
               

               
Conread position:
               
131-284
               

               
Cow position:
               
chr27:29319243-29319396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
46, 76
               

               
Conread position:
               
131-293
               

               
Cow position:
               
chr27:24303778-24303939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
24, 77
               

               
Conread position:
               
131-340
               

               
Cow position:
               
chr27:20803827-20803618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
48, 76
               

               
Conread position:
               
131-359
               

               
Cow position:
               
chr27:20517495-20517718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
192, 41
               

               
Conread position:
               
131-409
               

               
Cow position:
               
chr27:20552950-20552646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
23, 81
               

               
Conread position:
               
131-412
               

               
Cow position:
               
chr27:23929800-23930092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
22, 59
               

               
Conread position:
               
131-421
               

               
Cow position:
               
chr27:8168599-8168303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 77
               

               
Conread position:
               
131-442
               

               
Cow position:
               
chr27:18031242-18030912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
15, 74
               

               
Conread position:
               
131-442
               

               
Cow position:
               
chr27:24331552-24331870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 77
               

               
Conread position:
               
131-446
               

               
Cow position:
               
chr27:30872225-30871911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 77
               

               
Conread position:
               
131-452
               

               
Cow position:
               
chr27:4672843-4673175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 81
               

               
Conread position:
               
131-452
               

               
Cow position:
               
chr27:16780701-16781019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
47, 52
               

               
Conread position:
               
132-412
               

               
Cow position:
               
chr27:20637224-20636952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
48, 19
               

               
Conread position:
               
132-442
               

               
Cow position:
               
chr27:24446315-24446012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 77
               

               
Conread position:
               
132-442
               

               
Cow position:
               
chr27:30177719-30177430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
12, 76
               

               
Conread position:
               
133-411
               

               
Cow position:
               
chr27:25411675-25411401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
46, 65
               

               
Conread position:
               
133-430
               

               
Cow position:
               
chr27:20068142-20067844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
16, 76
               

               
Conread position:
               
133-452
               

               
Cow position:
               
chr27:30354511-30354189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 75
               

               
Conread position:
               
134-379
               

               
Cow position:
               
chr27:26347777-26347534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 37
               

               
Conread position:
               
134-421
               

               
Cow position:
               
chr27:26999586-26999293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
44, 27
               

               
Conread position:
               
137-325
               

               
Cow position:
               
chr27:18767222-18767038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
137-442
               

               
Cow position:
               
chr27:6073768-6074061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
34, 72
               

               
Conread position:
               
137-442
               

               
Cow position:
               
chr27:28496531-28496230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
41, 9
               

               
Conread position:
               
139-319
               

               
Cow position:
               
chr27:237111-237288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
41, 53
               

               
Conread position:
               
145-337
               

               
Cow position:
               
chr27:29841886-29841695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
34, 62
               

               
Conread position:
               
146-442
               

               
Cow position:
               
chr27:24321037-24321334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 49
               

               
Conread position:
               
147-432
               

               
Cow position:
               
chr27:27438657-27438366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
32, 60
               

               
Conread position:
               
147-442
               

               
Cow position:
               
chr27:19685865-19685570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 62
               

               
Conread position:
               
147-452
               

               
Cow position:
               
chr27:10307449-10307141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
32, 60
               

               
Conread position:
               
148-418
               

               
Cow position:
               
chr27:1353432-1353713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 57
               

               
Conread position:
               
148-440
               

               
Cow position:
               
chr27:9169789-9169502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
29, 10
               

               
Conread position:
               
148-442
               

               
Cow position:
               
chr27:26413405-26413111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 59
               

               
Conread position:
               
149-318
               

               
Cow position:
               
chr27:11994016-11993847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
29, 58
               

               
Conread position:
               
151-266
               

               
Cow position:
               
chr27:11466613-11466498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
27, 56
               

               
Conread position:
               
152-325
               

               
Cow position:
               
chr27:26853504-26853333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 53
               

               
Conread position:
               
152-354
               

               
Cow position:
               
chr27:30804520-30804714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
25, 55
               

               
Conread position:
               
152-369
               

               
Cow position:
               
chr27:8942836-8942609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
24, 55
               

               
Conread position:
               
152-388
               

               
Cow position:
               
chr27:26188683-26188915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
26, 55
               

               
Conread position:
               
152-390
               

               
Cow position:
               
chr27:22559970-22559726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
25, 55
               

               
Conread position:
               
152-399
               

               
Cow position:
               
chr27:20497059-20497318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 57
               

               
Conread position:
               
152-404
               

               
Cow position:
               
chr27:29380708-29380967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
23, 55
               

               
Conread position:
               
152-409
               

               
Cow position:
               
chr27:21213641-21213885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
27, 55
               

               
Conread position:
               
152-409
               

               
Cow position:
               
chr27:27003405-27003162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
27, 55
               

               
Conread position:
               
152-409
               

               
Cow position:
               
chr27:28245656-28245915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
23, 54
               

               
Conread position:
               
152-411
               

               
Cow position:
               
chr27:21978285-21978020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
27, 18
               

               
Conread position:
               
152-411
               

               
Cow position:
               
chr27:27038984-27038723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 55
               

               
Conread position:
               
152-412
               

               
Cow position:
               
chr27:15925199-15925462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
27, 55
               

               
Conread position:
               
152-412
               

               
Cow position:
               
chr27:30814268-30814532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
28, 21
               

               
Conread position:
               
152-413
               

               
Cow position:
               
chr27:20901414-20901680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
25, 142
               

               
Conread position:
               
152-438
               

               
Cow position:
               
chr27:1498168-1498457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 57
               

               
Conread position:
               
152-438
               

               
Cow position:
               
chr27:29312821-29312529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
26, 55
               

               
Conread position:
               
152-438
               

               
Cow position:
               
chr27:29431322-29431601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 57
               

               
Conread position:
               
152-442
               

               
Cow position:
               
chr27:23632453-23632746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 55
               

               
Conread position:
               
152-442
               

               
Cow position:
               
chr27:24014886-24014596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 55
               

               
Conread position:
               
152-442
               

               
Cow position:
               
chr27:26150871-26151164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 56
               

               
Conread position:
               
152-443
               

               
Cow position:
               
chr27:23882514-23882229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
25, 48
               

               
Conread position:
               
152-445
               

               
Cow position:
               
chr27:1122885-1123182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 55
               

               
Conread position:
               
152-456
               

               
Cow position:
               
chr27:536317-536616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
25, 9
               

               
Conread position:
               
152-456
               

               
Cow position:
               
chr27:11480783-11480471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
28, 55
               

               
Conread position:
               
152-456
               

               
Cow position:
               
chr27:18593126-18593429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 55
               

               
Conread position:
               
153-421
               

               
Cow position:
               
chr27:20549857-20549582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
153-452
               

               
Cow position:
               
chr27:14670528-14670226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 54
               

               
Conread position:
               
154-407
               

               
Cow position:
               
chr27:26581581-26581323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
26, 53
               

               
Conread position:
               
154-421
               

               
Cow position:
               
chr27:16965432-16965714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
25, 92
               

               
Conread position:
               
154-440
               

               
Cow position:
               
chr27:30582591-30582880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
25, 17
               

               
Conread position:
               
154-441
               

               
Cow position:
               
chr27:12246509-12246802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 55
               

               
Conread position:
               
154-442
               

               
Cow position:
               
chr27:8630015-8629727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
24, 53
               

               
Conread position:
               
154-442
               

               
Cow position:
               
chr27:20037258-20036984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
154-442
               

               
Cow position:
               
chr27:26428276-26427984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 16
               

               
Conread position:
               
155-397
               

               
Cow position:
               
chr27:20656763-20656532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
23, 58
               

               
Conread position:
               
155-430
               

               
Cow position:
               
chr27:715357-715639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 52
               

               
Conread position:
               
156-358
               

               
Cow position:
               
chr27:31017968-31017771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
21, 51
               

               
Conread position:
               
156-442
               

               
Cow position:
               
chr27:7212856-7212568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
22, 51
               

               
Conread position:
               
157-324
               

               
Cow position:
               
chr27:21130169-21130332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
144, 20
               

               
Conread position:
               
157-442
               

               
Cow position:
               
chr27:1058817-1058535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 20
               

               
Conread position:
               
158-456
               

               
Cow position:
               
chr27:28018195-28018495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 17
               

               
Conread position:
               
159-377
               

               
Cow position:
               
chr27:13607815-13607600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
78, 26
               

               
Conread position:
               
161-411
               

               
Cow position:
               
chr27:8405960-8405720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
17, 46
               

               
Conread position:
               
161-439
               

               
Cow position:
               
chr27:4806039-4805767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
17, 48
               

               
Conread position:
               
162-438
               

               
Cow position:
               
chr27:26433944-26433671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
16, 45
               

               
Conread position:
               
163-442
               

               
Cow position:
               
chr27:15204365-15204087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
23, 45
               

               
Conread position:
               
164-361
               

               
Cow position:
               
chr27:21453229-21453035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
15, 43
               

               
Conread position:
               
164-407
               

               
Cow position:
               
chr27:4819847-4819592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
14, 32
               

               
Conread position:
               
164-442
               

               
Cow position:
               
chr27:4813018-4812732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 45
               

               
Conread position:
               
164-442
               

               
Cow position:
               
chr27:27844137-27843848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 27
               

               
Conread position:
               
164-442
               

               
Cow position:
               
chr27:30374702-30374426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
15, 7
               

               
Conread position:
               
168-373
               

               
Cow position:
               
chr27:6924954-6925167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
11, 39
               

               
Conread position:
               
168-383
               

               
Cow position:
               
chr27:30365188-30365400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
11, 23
               

               
Conread position:
               
168-409
               

               
Cow position:
               
chr27:16625769-16626010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
10, 39
               

               
Conread position:
               
168-411
               

               
Cow position:
               
chr27:6159850-6160098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
142, 40
               

               
Conread position:
               
168-411
               

               
Cow position:
               
chr27:19648073-19647823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
9, 39
               

               
Conread position:
               
168-411
               

               
Cow position:
               
chr27:20641466-20641225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 39
               

               
Conread position:
               
168-412
               

               
Cow position:
               
chr27:12278379-12278149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
11, 17
               

               
Conread position:
               
168-430
               

               
Cow position:
               
chr27:26299712-26299975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
11, 23
               

               
Conread position:
               
168-442
               

               
Cow position:
               
chr27:8062481-8062212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
11, 39
               

               
Conread position:
               
168-442
               

               
Cow position:
               
chr27:13875605-13875879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 10
               

               
Conread position:
               
168-442
               

               
Cow position:
               
chr27:29515976-29515715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
14, 39
               

               
Conread position:
               
168-449
               

               
Cow position:
               
chr27:29831828-29831535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 39
               

               
Conread position:
               
168-449
               

               
Cow position:
               
chr27:30868871-30868587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 39
               

               
Conread position:
               
169-358
               

               
Cow position:
               
chr27:15343405-15343223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
10, 38
               

               
Conread position:
               
169-366
               

               
Cow position:
               
chr27:26013505-26013303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
10, 38
               

               
Conread position:
               
170-411
               

               
Cow position:
               
chr27:11435449-11435208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
142, 8
               

               
Conread position:
               
170-411
               

               
Cow position:
               
chr27:27554806-27554567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 20
               

               
Conread position:
               
170-415
               

               
Cow position:
               
chr27:30261021-30260775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
9, 37
               

               
Conread position:
               
170-437
               

               
Cow position:
               
chr27:23554455-23554180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
9, 30
               

               
Conread position:
               
170-449
               

               
Cow position:
               
chr27:28271279-28270995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
10, 37
               

               
Conread position:
               
171-322
               

               
Cow position:
               
chr27:10653558-10653707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
171-409
               

               
Cow position:
               
chr27:30672686-30672449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
8, 36
               

               
Conread position:
               
171-435
               

               
Cow position:
               
chr27:25471012-25471277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
13, 24
               

               
Conread position:
               
172-438
               

               
Cow position:
               
chr27:706827-707091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
148, 47
               

               
Conread position:
               
173-359
               

               
Cow position:
               
chr27:26786116-26785926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
7, 31
               

               
Conread position:
               
173-434
               

               
Cow position:
               
chr27:19500359-19500092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
173-442
               

               
Cow position:
               
chr27:10582247-10582507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
175-357
               

               
Cow position:
               
chr27:21975930-21976111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
135, 31
               

               
Conread position:
               
175-397
               

               
Cow position:
               
chr27:26135024-26135239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
143, 31
               

               
Conread position:
               
175-442
               

               
Cow position:
               
chr27:25379865-25380135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 227
               

               
Conread position:
               
176-442
               

               
Cow position:
               
chr27:30793055-30792792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
146, 31
               

               
Conread position:
               
177-369
               

               
Cow position:
               
chr27:15215109-15215307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
114, 29
               

               
Conread position:
               
177-401
               

               
Cow position:
               
chr27:8263458-8263229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
143, 29
               

               
Conread position:
               
177-442
               

               
Cow position:
               
chr27:6499940-6500209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
143, 29
               

               
Conread position:
               
177-442
               

               
Cow position:
               
chr27:22513798-22513530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 29
               

               
Conread position:
               
177-456
               

               
Cow position:
               
chr27:25998581-25998863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
39, 31
               

               
Conread position:
               
178-411
               

               
Cow position:
               
chr27:18569349-18569575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
170, 17
               

               
Conread position:
               
178-452
               

               
Cow position:
               
chr27:23472139-23472410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 28
               

               
Conread position:
               
179-325
               

               
Cow position:
               
chr27:2885951-2885808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
89, 27
               

               
Conread position:
               
179-332
               

               
Cow position:
               
chr27:6290355-6290501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
179-360
               

               
Cow position:
               
chr27:13869504-13869683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
179-410
               

               
Cow position:
               
chr27:20078749-20078982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
142, 27
               

               
Conread position:
               
179-412
               

               
Cow position:
               
chr27:20101251-20101485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
51, 27
               

               
Conread position:
               
179-417
               

               
Cow position:
               
chr27:15871042-15871285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
134, 27
               

               
Conread position:
               
179-421
               

               
Cow position:
               
chr27:15271801-15272037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
186, 29
               

               
Conread position:
               
179-437
               

               
Cow position:
               
chr27:21408682-21408413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
118, 27
               

               
Conread position:
               
179-442
               

               
Cow position:
               
chr27:11296151-11296402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
243, 27
               

               
Conread position:
               
179-442
               

               
Cow position:
               
chr27:13639102-13638848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
187, 29
               

               
Conread position:
               
179-442
               

               
Cow position:
               
chr27:16786710-16786971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
144, 27
               

               
Conread position:
               
179-442
               

               
Cow position:
               
chr27:18739258-18739532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
117, 27
               

               
Conread position:
               
179-442
               

               
Cow position:
               
chr27:22426951-22426684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
137, 28
               

               
Conread position:
               
180-412
               

               
Cow position:
               
chr27:11273458-11273696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
48, 26
               

               
Conread position:
               
180-435
               

               
Cow position:
               
chr27:20918773-20919030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
145, 28
               

               
Conread position:
               
180-438
               

               
Cow position:
               
chr27:19577558-19577815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
102, 13
               

               
Conread position:
               
180-452
               

               
Cow position:
               
chr27:815244-815519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 26
               

               
Conread position:
               
181-442
               

               
Cow position:
               
chr27:11536222-11535952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
141, 25
               

               
Conread position:
               
181-442
               

               
Cow position:
               
chr27:29977134-29977393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
184, 25
               

               
Conread position:
               
181-445
               

               
Cow position:
               
chr27:20247921-20247656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
139, 25
               

               
Conread position:
               
181-452
               

               
Cow position:
               
chr27:11815864-11815605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 27
               

               
Conread position:
               
183-442
               

               
Cow position:
               
chr27:12429292-12429553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 23
               

               
Conread position:
               
184-406
               

               
Cow position:
               
chr27:11151555-11151787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
117, 22
               

               
Conread position:
               
185-407
               

               
Cow position:
               
chr27:4829924-4829691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
56, 10
               

               
Conread position:
               
185-442
               

               
Cow position:
               
chr27:3784-4032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 21
               

               
Conread position:
               
186-437
               

               
Cow position:
               
chr27:20368915-20369171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
22, 73
               

               
Conread position:
               
186-442
               

               
Cow position:
               
chr27:9090902-9090657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
134, 20
               

               
Conread position:
               
187-363
               

               
Cow position:
               
chr27:20085451-20085632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
21, 75
               

               
Conread position:
               
187-442
               

               
Cow position:
               
chr27:24999851-24999590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
129, 19
               

               
Conread position:
               
187-449
               

               
Cow position:
               
chr27:21351132-21350864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
129, 21
               

               
Conread position:
               
188-321
               

               
Cow position:
               
chr27:28472670-28472803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
42, 18
               

               
Conread position:
               
188-357
               

               
Cow position:
               
chr27:23876962-23876777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
42, 18
               

               
Conread position:
               
188-359
               

               
Cow position:
               
chr27:20056078-20055906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
28, 18
               

               
Conread position:
               
188-411
               

               
Cow position:
               
chr27:27442279-27442054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
183, 18
               

               
Conread position:
               
188-437
               

               
Cow position:
               
chr27:13410272-13410030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
133, 18
               

               
Conread position:
               
188-441
               

               
Cow position:
               
chr27:11081091-11081340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
56, 18
               

               
Conread position:
               
194-411
               

               
Cow position:
               
chr27:20789483-20789261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 14
               

               
Conread position:
               
194-413
               

               
Cow position:
               
chr27:30804239-30804457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
121, 12
               

               
Conread position:
               
194-437
               

               
Cow position:
               
chr27:6051993-6052239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
131, 12
               

               
Conread position:
               
194-437
               

               
Cow position:
               
chr27:23576642-23576401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
127, 13
               

               
Conread position:
               
207-442
               

               
Cow position:
               
chr27:29816712-29816477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
133, 81
               

               
Conread position:
               
209-437
               

               
Cow position:
               
chr27:2683235-2683004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
112, 79
               

               
Conread position:
               
219-340
               

               
Cow position:
               
chr27:19773930-19774050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
50, 69
               

               
Conread position:
               
222-442
               

               
Cow position:
               
chr27:732498-732716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
100, 18
               

               
Conread position:
               
222-442
               

               
Cow position:
               
chr27:13197828-13198061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
60, 135
               

               
Conread position:
               
222-442
               

               
Cow position:
               
chr27:23070436-23070215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
104, 65
               

               
Conread position:
               
222-442
               

               
Cow position:
               
chr27:27512710-27512935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
98, 75
               

               
Conread position:
               
222-442
               

               
Cow position:
               
chr27:29905535-29905747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
99, 65
               

               
Conread position:
               
223-432
               

               
Cow position:
               
chr27:14701650-14701438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
10, 19
               

               
Conread position:
               
224-438
               

               
Cow position:
               
chr27:25676154-25676367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
103, 16
               

               
Conread position:
               
226-409
               

               
Cow position:
               
chr27:6350913-6350715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
227-350
               

               
Cow position:
               
chr27:24113126-24113257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
227-369
               

               
Cow position:
               
chr27:26979784-26979634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
227-413
               

               
Cow position:
               
chr27:11416376-11416567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
93, 44
               

               
Conread position:
               
227-421
               

               
Cow position:
               
chr27:20635105-20635292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
20, 66
               

               
Conread position:
               
227-422
               

               
Cow position:
               
chr27:26141698-26141899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
96, 59
               

               
Conread position:
               
227-442
               

               
Cow position:
               
chr27:27040530-27040752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
73, 202
               

               
Conread position:
               
228-347
               

               
Cow position:
               
chr27:4486696-4486572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
90, 54
               

               
Conread position:
               
228-409
               

               
Cow position:
               
chr27:18491769-18491956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
51, 160
               

               
Conread position:
               
228-421
               

               
Cow position:
               
chr27:7538148-7537950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
90, 18
               

               
Conread position:
               
228-438
               

               
Cow position:
               
chr27:21569911-21569703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
90, 60
               

               
Conread position:
               
228-452
               

               
Cow position:
               
chr27:154292-154523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
228-452
               

               
Cow position:
               
chr27:6522973-6523200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
90, 52
               

               
Conread position:
               
229-442
               

               
Cow position:
               
chr27:29283478-29283264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
89, 69
               

               
Conread position:
               
230-455
               

               
Cow position:
               
chr27:30362177-30362400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
90, 61
               

               
Conread position:
               
232-388
               

               
Cow position:
               
chr27:31159733-31159897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
233-418
               

               
Cow position:
               
chr27:20570053-20570245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
11, 55
               

               
Conread position:
               
233-441
               

               
Cow position:
               
chr27:14902719-14902505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
71, 54
               

               
Conread position:
               
233-452
               

               
Cow position:
               
chr27:27528421-27528207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
235-369
               

               
Cow position:
               
chr27:1565490-1565352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
235-440
               

               
Cow position:
               
chr27:27259550-27259751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
74, 45
               

               
Conread position:
               
235-442
               

               
Cow position:
               
chr27:27449498-27449290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
80, 14
               

               
Conread position:
               
235-442
               

               
Cow position:
               
chr27:27550798-27550603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
85, 31
               

               
Conread position:
               
235-442
               

               
Cow position:
               
chr27:28061825-28061620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
92, 66
               

               
Conread position:
               
237-446
               

               
Cow position:
               
chr27:6058441-6058651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
16, 52
               

               
Conread position:
               
238-421
               

               
Cow position:
               
chr27:10395320-10395135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
82, 29
               

               
Conread position:
               
238-437
               

               
Cow position:
               
chr27:2298345-2298551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
84, 56
               

               
Conread position:
               
239-410
               

               
Cow position:
               
chr27:16237849-16238020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
239-427
               

               
Cow position:
               
chr27:9697716-9697910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
239-442
               

               
Cow position:
               
chr27:22268441-22268649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
81, 48
               

               
Conread position:
               
239-442
               

               
Cow position:
               
chr27:28038399-28038193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
89, 22
               

               
Conread position:
               
239-445
               

               
Cow position:
               
chr27:27141542-27141741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
241-431
               

               
Cow position:
               
chr27:25790746-25790942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
79, 49
               

               
Conread position:
               
242-409
               

               
Cow position:
               
chr27:4011622-4011793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
78, 47
               

               
Conread position:
               
242-430
               

               
Cow position:
               
chr27:31147726-31147538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
122, 45
               

               
Conread position:
               
242-442
               

               
Cow position:
               
chr27:1183941-1183731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
37, 163
               

               
Conread position:
               
243-442
               

               
Cow position:
               
chr27:29250824-29251024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
82, 43
               

               
Conread position:
               
243-442
               

               
Cow position:
               
chr27:30670684-30670882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
41, 106
               

               
Conread position:
               
246-390
               

               
Cow position:
               
chr27:4482909-4482762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
73, 45
               

               
Conread position:
               
246-442
               

               
Cow position:
               
chr27:26398311-26398114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
76, 40
               

               
Conread position:
               
249-407
               

               
Cow position:
               
chr27:22154007-22154169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
249-439
               

               
Cow position:
               
chr27:20786344-20786539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
76, 44
               

               
Conread position:
               
250-428
               

               
Cow position:
               
chr27:22330722-22330534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
252-411
               

               
Cow position:
               
chr27:30844125-30843959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
252-456
               

               
Cow position:
               
chr27:16871963-16871757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
17, 25
               

               
Conread position:
               
254-441
               

               
Cow position:
               
chr27:29399758-29399958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
24, 159
               

               
Conread position:
               
259-440
               

               
Cow position:
               
chr27:16513915-16513739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
95, 35
               

               
Conread position:
               
259-452
               

               
Cow position:
               
chr27:15859129-15858936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
64, 119
               

               
Conread position:
               
266-442
               

               
Cow position:
               
chr27:18215020-18215200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
52, 20
               

               
Conread position:
               
271-439
               

               
Cow position:
               
chr27:15200673-15200839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
77, 10
               

               
Conread position:
               
273-442
               

               
Cow position:
               
chr27:17926648-17926492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
92, 19
               

               
Conread position:
               
274-442
               

               
Cow position:
               
chr27:20591954-20592128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
50, 154
               

               
Conread position:
               
275-411
               

               
Cow position:
               
chr27:30856408-30856274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
276-442
               

               
Cow position:
               
chr27:1884023-1884181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
16, 36
               

               
Conread position:
               
279-438
               

               
Cow position:
               
chr27:26885273-26885113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
46, 22
               

               
Conread position:
               
288-417
               

               
Cow position:
               
chr27:23455169-23455028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
288-453
               

               
Cow position:
               
chr27:13376034-13375876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
292-442
               

               
Cow position:
               
chr27:18434479-18434326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
300-452
               

               
Cow position:
               
chr27:26625130-26625279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
66, 90
               

               
Conread position:
               
313-442
               

               
Cow position:
               
chr27:20548459-20548332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
313-456
               

               
Cow position:
               
chr27:23558370-23558227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
109, 23
               

               
Conread position:
               
318-437
               

               
Cow position:
               
chr27:27055597-27055717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
320-442
               

               
Cow position:
               
chr27:22179769-22179653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 39
               

               
Conread position:
               
321-452
               

               
Cow position:
               
chr27:16620014-16620146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
321-456
               

               
Cow position:
               
chr27:30989819-30989685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
44, 71
               

               
Conread position:
               
324-440
               

               
Cow position:
               
chr27:21453049-21452927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
326-442
               

               
Cow position:
               
chr27:6674266-6674385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 20
               

               
Conread position:
               
333-442
               

               
Cow position:
               
chr27:26322388-26322498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
87, 0
               
Show alignments to all cow chromosomes.