Cow genome map


           Conread name:
           Ss1.1-rlin39_j20.5
        

               Conread position:
               1012-1247
               

               Cow position:
               chr13:30772985-30772745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               33, 83
               

               Conread position:
               1015-1218
               

               Cow position:
               chr13:16041103-16040895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1021-1247
               

               Cow position:
               chr13:20792529-20792317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1021-1248
               

               Cow position:
               chr13:11025511-11025296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1036-1192
               

               Cow position:
               chr13:7310810-7310652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               61, 18
               

               Conread position:
               1044-1245
               

               Cow position:
               chr13:17127499-17127291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               1044-1248
               

               Cow position:
               chr13:46710896-46711104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               22, 72
               

               Conread position:
               1047-1218
               

               Cow position:
               chr13:11570732-11570560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               27, 160
               

               Conread position:
               1055-1218
               

               Cow position:
               chr13:26983668-26983504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               19, 64
               

               Conread position:
               1062-1247
               

               Cow position:
               chr13:57313932-57313746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               12, 128
               

               Conread position:
               1063-1215
               

               Cow position:
               chr13:20490334-20490185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               1067-1246
               

               Cow position:
               chr13:34502249-34502433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               38, 0
               
Show alignments to all cow chromosomes.