Cow genome map


           Conread name:
           Ss1.1-rlin39_j20.5
        

               Conread position:
               991-1221
               

               Cow position:
               chr15:32325537-32325306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               38, 10
               

               Conread position:
               997-1248
               

               Cow position:
               chr15:23273459-23273204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               20, 72
               

               Conread position:
               1022-1212
               

               Cow position:
               chr15:13691223-13691419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               1022-1248
               

               Cow position:
               chr15:3539222-3539452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               23, 77
               

               Conread position:
               1029-1248
               

               Cow position:
               chr15:20612845-20613066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               22, 85
               

               Conread position:
               1063-1218
               

               Cow position:
               chr15:3593506-3593348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               48, 10
               

               Conread position:
               1078-1248
               

               Cow position:
               chr15:5443286-5443457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               38, 115
               

               Conread position:
               1083-1248
               

               Cow position:
               chr15:19126981-19127154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               9, 0
               
Show alignments to all cow chromosomes.