Cow genome map


           Conread name:
           Ss1.1-rlin39_j20.5
        

               Conread position:
               1016-1238
               

               Cow position:
               chr19:12375139-12374909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               29, 192
               

               Conread position:
               1017-1211
               

               Cow position:
               chr19:15494609-15494418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               1068-1218
               

               Cow position:
               chr19:2762741-2762584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               1072-1218
               

               Cow position:
               chr19:15244658-15244509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               34, 20
               

               Conread position:
               1076-1243
               

               Cow position:
               chr19:25135941-25135773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               144, 90
               

               Conread position:
               1083-1212
               

               Cow position:
               chr19:31774176-31774306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               34, 0
               
Show alignments to all cow chromosomes.