Cow genome map


           Conread name:
           Ss1.1-rlin39_j20.5
        

               Conread position:
               1015-1215
               

               Cow position:
               chr22:13997677-13997877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               12, 40
               

               Conread position:
               1016-1248
               

               Cow position:
               chr22:16104706-16104938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               31, 50
               

               Conread position:
               1021-1211
               

               Cow position:
               chr22:35236260-35236451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               22, 76
               

               Conread position:
               1050-1230
               

               Cow position:
               chr22:12774830-12775011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               134, 174
               

               Conread position:
               1054-1215
               

               Cow position:
               chr22:36359421-36359579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               1076-1248
               

               Cow position:
               chr22:6014172-6013996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               30, 17
               

               Conread position:
               1082-1246
               

               Cow position:
               chr22:32529403-32529572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               18, 88
               
Show alignments to all cow chromosomes.