Cow genome map


           Conread name:
           Ss1.1-rlin39_j20.5
        

               Conread position:
               1015-1247
               

               Cow position:
               chr28:7595457-7595221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               12, 55
               

               Conread position:
               1054-1227
               

               Cow position:
               chr28:25165805-25165629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               52, 29
               

               Conread position:
               1062-1218
               

               Cow position:
               chr28:11690248-11690091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               1062-1248
               

               Cow position:
               chr28:978585-978395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               44, 10
               

               Conread position:
               1069-1195
               

               Cow position:
               chr28:22242311-22242187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               1072-1242
               

               Cow position:
               chr28:20252225-20252398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               34, 119
               

               Conread position:
               1078-1244
               

               Cow position:
               chr28:26452592-26452420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               28, 86
               
Show alignments to all cow chromosomes.