Cow genome map


           Conread name:
           Ss1.1-rlin39_j20.5
        

               Conread position:
               967-1218
               

               Cow position:
               chr29:16662968-16663225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               19, 88
               

               Conread position:
               1014-1248
               

               Cow position:
               chr29:13142750-13142978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               13, 42
               

               Conread position:
               1016-1215
               

               Cow position:
               chr29:22332595-22332387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               11, 163
               

               Conread position:
               1047-1229
               

               Cow position:
               chr29:38620730-38620542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1054-1212
               

               Cow position:
               chr29:26940220-26940381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               24, 11
               

               Conread position:
               1062-1248
               

               Cow position:
               chr29:13608686-13608494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               1069-1218
               

               Cow position:
               chr29:26250490-26250639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.