Cow genome map
| Conread name: | Ss1.1-rlin39_j20.5 |
| Conread position: | 32-924 |
| Cow position: | chr3:24405627-24406503 (view UCSC Genome Browser custom track) |
| Alignm length: | 905 |
| Alignm identity: | 734 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 340, 29 |
| Conread position: | 985-1166 |
| Cow position: | chr3:24406525-24406710 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 997-1246 |
| Cow position: | chr3:46135018-46134762 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 30, 79 |
| Conread position: | 1012-1248 |
| Cow position: | chr3:67927097-67927344 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 33, 84 |
| Conread position: | 1015-1218 |
| Cow position: | chr3:16170130-16169925 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 91, 12 |
| Conread position: | 1015-1218 |
| Cow position: | chr3:31924716-31924511 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 12, 33 |
| Conread position: | 1015-1239 |
| Cow position: | chr3:49635717-49635495 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 14, 49 |
| Conread position: | 1016-1195 |
| Cow position: | chr3:18218774-18218595 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1022-1211 |
| Cow position: | chr3:56565338-56565537 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1031-1245 |
| Cow position: | chr3:54554351-54554567 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 12, 31 |
| Conread position: | 1053-1215 |
| Cow position: | chr3:15329497-15329331 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1053-1246 |
| Cow position: | chr3:4555734-4555533 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 9, 173 |
| Conread position: | 1054-1211 |
| Cow position: | chr3:21655890-21656049 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 52, 19 |
| Conread position: | 1058-1218 |
| Cow position: | chr3:42914379-42914539 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 56 |
| Conread position: | 1085-1248 |
| Cow position: | chr3:19559977-19559808 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 21, 0 |
Show alignments to all cow chromosomes.