Cow genome map


           Conread name:
           Ss1.1-rlin39_j20.5
        

               Conread position:
               1015-1239
               

               Cow position:
               chr5:35708436-35708205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               12, 204
               

               Conread position:
               1015-1248
               

               Cow position:
               chr5:30336126-30335900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               30, 45
               

               Conread position:
               1022-1218
               

               Cow position:
               chr5:50770394-50770200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               53, 25
               

               Conread position:
               1061-1218
               

               Cow position:
               chr5:11955514-11955350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               1080-1248
               

               Cow position:
               chr5:33283441-33283275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               150, 32
               
Show alignments to all cow chromosomes.