Cow genome map


           Conread name:
           Ss1.1-rlin39_j20.5
        

               Conread position:
               1012-1247
               

               Cow position:
               chr7:3626609-3626842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               56, 35
               

               Conread position:
               1013-1218
               

               Cow position:
               chr7:23921442-23921645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               93, 18
               

               Conread position:
               1016-1248
               

               Cow position:
               chr7:42494617-42494388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               11, 48
               

               Conread position:
               1022-1212
               

               Cow position:
               chr7:41170459-41170645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               100, 31
               

               Conread position:
               1054-1211
               

               Cow position:
               chr7:34871910-34871750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               14, 111
               

               Conread position:
               1056-1248
               

               Cow position:
               chr7:57273121-57272919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               1061-1248
               

               Cow position:
               chr7:31890308-31890499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               1066-1218
               

               Cow position:
               chr7:1666784-1666940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               1076-1218
               

               Cow position:
               chr7:42555344-42555483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               1079-1248
               

               Cow position:
               chr7:49893356-49893182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               1083-1248
               

               Cow position:
               chr7:34218234-34218063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               23, 0
               
Show alignments to all cow chromosomes.