Cow genome map
| Conread name: | Ss1.1-rlnt23c_n4.5 |
| Conread position: | 1-439 |
| Cow position: | chr13:22125284-22125722 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 273 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 207, 212 |
| Conread position: | 1-439 |
| Cow position: | chr13:24163010-24163448 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 207, 212 |
| Conread position: | 1-492 |
| Cow position: | chr13:24162842-24163333 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 300 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-439 |
| Cow position: | chr13:22124949-22125386 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 275 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 9, 16 |
| Conread position: | 2-439 |
| Cow position: | chr13:24162675-24163112 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 278 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 9, 16 |
| Conread position: | 2-446 |
| Cow position: | chr13:22125453-22125897 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 276 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 294, 263 |
| Conread position: | 2-446 |
| Cow position: | chr13:24163179-24163623 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 285 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 127, 120 |
| Conread position: | 2-492 |
| Cow position: | chr13:22125033-22125523 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 310 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 35, 30 |
| Conread position: | 2-492 |
| Cow position: | chr13:22125201-22125691 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 312 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 122, 127 |
| Conread position: | 2-492 |
| Cow position: | chr13:24162759-24163249 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 30 |
| Conread position: | 2-492 |
| Cow position: | chr13:39930584-39931074 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 16 |
| Conread position: | 2-493 |
| Cow position: | chr13:22124865-22125356 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 122 |
| Conread position: | 2-493 |
| Cow position: | chr13:24162591-24163082 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 203 |
| Conread position: | 2-493 |
| Cow position: | chr13:39930668-39931157 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 16 |
| Conread position: | 2-505 |
| Cow position: | chr13:22124697-22125198 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 312 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 43, 37 |
| Conread position: | 2-505 |
| Cow position: | chr13:24162423-24162924 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 37 |
| Conread position: | 4-493 |
| Cow position: | chr13:22124783-22125272 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 41 |
| Conread position: | 4-493 |
| Cow position: | chr13:24162509-24162998 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 37 |
| Conread position: | 13-492 |
| Cow position: | chr13:22125128-22125607 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 293 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 16-492 |
| Cow position: | chr13:24162941-24163417 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 113 |
| Conread position: | 43-469 |
| Cow position: | chr13:22125410-22125836 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 269 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 302, 310 |
| Conread position: | 43-469 |
| Cow position: | chr13:24163136-24163562 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 272 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 302, 310 |
| Conread position: | 162-492 |
| Cow position: | chr13:24162415-24162745 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 51, 45 |
| Conread position: | 166-492 |
| Cow position: | chr13:39930580-39930906 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 126, 131 |
Show alignments to all cow chromosomes.