Cow genome map
| Conread name: | Ss1.1-rlnt23c_n4.5 |
| Conread position: | 1-331 |
| Cow position: | chr17:44468050-44468380 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 115, 106 |
| Conread position: | 1-430 |
| Cow position: | chr17:44467882-44468311 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 19 |
| Conread position: | 1-467 |
| Cow position: | chr17:41441017-41440551 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 151 |
| Conread position: | 1-479 |
| Cow position: | chr17:41440849-41440371 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 24 |
| Conread position: | 1-492 |
| Cow position: | chr17:44467462-44467953 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 106 |
| Conread position: | 1-492 |
| Cow position: | chr17:44467714-44468205 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 104 |
| Conread position: | 1-493 |
| Cow position: | chr17:41440933-41440441 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 67 |
| Conread position: | 1-493 |
| Cow position: | chr17:44467798-44468290 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 21 |
| Conread position: | 1-499 |
| Cow position: | chr17:44467378-44467876 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 122 |
| Conread position: | 2-410 |
| Cow position: | chr17:41440596-41440188 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 47 |
| Conread position: | 2-466 |
| Cow position: | chr17:41440764-41440300 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 47 |
| Conread position: | 2-504 |
| Cow position: | chr17:41441100-41440600 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 234 |
| Conread position: | 3-409 |
| Cow position: | chr17:41440511-41440101 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 107 |
| Conread position: | 3-421 |
| Cow position: | chr17:44467968-44468386 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 17 |
| Conread position: | 3-492 |
| Cow position: | chr17:44467632-44468121 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 17 |
| Conread position: | 3-499 |
| Cow position: | chr17:44467548-44468044 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 17 |
| Conread position: | 4-491 |
| Cow position: | chr17:41440678-41440191 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 120 |
| Conread position: | 5-312 |
| Cow position: | chr17:45350886-45350579 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 21, 28 |
| Conread position: | 65-511 |
| Cow position: | chr17:44467357-44467802 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 126 |
| Conread position: | 68-467 |
| Cow position: | chr17:41441118-41440719 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 144 |
| Conread position: | 70-394 |
| Cow position: | chr17:45350905-45350581 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 40, 47 |
| Conread position: | 152-492 |
| Cow position: | chr17:41441118-41440778 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 230 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 54, 60 |
| Conread position: | 210-479 |
| Cow position: | chr17:45350849-45350580 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 147, 162 |
| Conread position: | 228-492 |
| Cow position: | chr17:45350914-45350651 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 213, 7 |
Show alignments to all cow chromosomes.