Cow genome map
| Conread name: | Ss1.1-rlnt23c_n4.5 |
| Conread position: | 1-188 |
| Cow position: | chr18:54687765-54687952 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 116, 109 |
| Conread position: | 1-261 |
| Cow position: | chr18:50282033-50282293 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 98, 106 |
| Conread position: | 1-338 |
| Cow position: | chr18:56391963-56391629 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 108 |
| Conread position: | 1-355 |
| Cow position: | chr18:53610192-53609838 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 115, 94 |
| Conread position: | 1-355 |
| Cow position: | chr18:56329240-56328886 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 96, 100 |
| Conread position: | 1-380 |
| Cow position: | chr18:53610108-53609729 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 120, 113 |
| Conread position: | 1-405 |
| Cow position: | chr18:56267521-56267117 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 364, 371 |
| Conread position: | 1-410 |
| Cow position: | chr18:42724397-42723988 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 45, 24 |
| Conread position: | 1-412 |
| Cow position: | chr18:22843755-22843335 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 263 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 26, 35 |
| Conread position: | 1-492 |
| Cow position: | chr18:49033191-49032700 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 442, 430 |
| Conread position: | 1-492 |
| Cow position: | chr18:53635517-53635027 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 304 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 203, 189 |
| Conread position: | 1-492 |
| Cow position: | chr18:53635601-53635110 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 310 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 36, 28 |
| Conread position: | 1-492 |
| Cow position: | chr18:56316072-56316563 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 298 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 355, 366 |
| Conread position: | 1-492 |
| Cow position: | chr18:56316408-56316899 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 14 |
| Conread position: | 1-492 |
| Cow position: | chr18:56329492-56329001 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 25 |
| Conread position: | 1-492 |
| Cow position: | chr18:56391408-56390917 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 485, 481 |
| Conread position: | 1-493 |
| Cow position: | chr18:56128564-56129056 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 313 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 36, 28 |
| Conread position: | 1-495 |
| Cow position: | chr18:56128648-56129142 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 310 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 121, 109 |
| Conread position: | 1-503 |
| Cow position: | chr18:49032939-49032436 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 25 |
| Conread position: | 1-504 |
| Cow position: | chr18:56391492-56390991 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 203 |
| Conread position: | 1-507 |
| Cow position: | chr18:56391324-56390818 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-507 |
| Cow position: | chr18:56391576-56391072 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 493, 0 |
| Conread position: | 1-511 |
| Cow position: | chr18:55497515-55497002 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 112 |
| Conread position: | 2-299 |
| Cow position: | chr18:56267436-56267139 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-352 |
| Cow position: | chr18:52011915-52011565 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 114, 104 |
| Conread position: | 2-361 |
| Cow position: | chr18:51400556-51400915 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 268, 261 |
| Conread position: | 2-381 |
| Cow position: | chr18:56128733-56129112 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 237 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 188, 202 |
| Conread position: | 2-394 |
| Cow position: | chr18:50281950-50282342 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 127, 122 |
| Conread position: | 2-409 |
| Cow position: | chr18:56316661-56317068 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 116 |
| Conread position: | 2-410 |
| Cow position: | chr18:49033106-49032698 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 263 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 286, 261 |
| Conread position: | 2-429 |
| Cow position: | chr18:52011999-52011572 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 275 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 30, 19 |
| Conread position: | 2-430 |
| Cow position: | chr18:50030877-50030444 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 20 |
| Conread position: | 2-439 |
| Cow position: | chr18:47846577-47846140 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 283 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 19, 26 |
| Conread position: | 2-469 |
| Cow position: | chr18:56329323-56328856 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 24 |
| Conread position: | 2-479 |
| Cow position: | chr18:49022754-49023231 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 280 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 27, 34 |
| Conread position: | 2-479 |
| Cow position: | chr18:52012167-52011690 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 107 |
| Conread position: | 2-479 |
| Cow position: | chr18:56329575-56329098 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 108 |
| Conread position: | 2-492 |
| Cow position: | chr18:22844006-22843507 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 307 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 306, 485 |
| Conread position: | 2-492 |
| Cow position: | chr18:42724564-42724074 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 296 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 115, 107 |
| Conread position: | 2-492 |
| Cow position: | chr18:49032686-49032196 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 305 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 368, 360 |
| Conread position: | 2-492 |
| Cow position: | chr18:49032854-49032364 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 295 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 102, 97 |
| Conread position: | 2-492 |
| Cow position: | chr18:49033274-49032784 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 19 |
| Conread position: | 2-492 |
| Cow position: | chr18:50281698-50282188 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 309 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 72, 92 |
| Conread position: | 2-492 |
| Cow position: | chr18:50848611-50849101 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 288 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 378, 374 |
| Conread position: | 2-492 |
| Cow position: | chr18:52012083-52011593 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 19 |
| Conread position: | 2-492 |
| Cow position: | chr18:52012335-52011845 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 107 |
| Conread position: | 2-492 |
| Cow position: | chr18:53610359-53609869 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 108 |
| Conread position: | 2-492 |
| Cow position: | chr18:53610443-53609953 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 107 |
| Conread position: | 2-492 |
| Cow position: | chr18:53635684-53635194 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 304 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 111, 118 |
| Conread position: | 2-492 |
| Cow position: | chr18:53635936-53635446 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 304 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 281, 276 |
| Conread position: | 2-492 |
| Cow position: | chr18:53636020-53635530 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 297 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 116, 107 |
| Conread position: | 2-492 |
| Cow position: | chr18:56128145-56128635 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 293 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 281, 276 |
| Conread position: | 2-492 |
| Cow position: | chr18:56128481-56128971 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 298 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 111, 116 |
| Conread position: | 2-492 |
| Cow position: | chr18:56316157-56316647 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 297 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 368, 360 |
| Conread position: | 2-492 |
| Cow position: | chr18:56329743-56329253 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 276 |
| Conread position: | 2-492 |
| Cow position: | chr18:56330163-56329673 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 306 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 34, 24 |
| Conread position: | 2-493 |
| Cow position: | chr18:42744525-42744034 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 288 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 35, 19 |
| Conread position: | 2-493 |
| Cow position: | chr18:49033358-49032867 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 31 |
| Conread position: | 2-493 |
| Cow position: | chr18:52012251-52011760 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 23 |
| Conread position: | 2-493 |
| Cow position: | chr18:53635768-53635277 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 284, 276 |
| Conread position: | 2-493 |
| Cow position: | chr18:53635852-53635361 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 302 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 49, 32 |
| Conread position: | 2-493 |
| Cow position: | chr18:56128229-56128720 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 312 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 125, 108 |
| Conread position: | 2-493 |
| Cow position: | chr18:56493952-56494443 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 292 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 114, 108 |
| Conread position: | 2-496 |
| Cow position: | chr18:53610275-53609780 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 306 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 285, 273 |
| Conread position: | 2-500 |
| Cow position: | chr18:56316577-56317075 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 361, 370 |
| Conread position: | 3-492 |
| Cow position: | chr18:49033021-49032532 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 302 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 115, 107 |
| Conread position: | 3-492 |
| Cow position: | chr18:56329406-56328917 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 107 |
| Conread position: | 3-492 |
| Cow position: | chr18:56329826-56329337 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 107 |
| Conread position: | 3-492 |
| Cow position: | chr18:56329994-56329505 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 275 |
| Conread position: | 3-511 |
| Cow position: | chr18:55497681-55497175 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 201 |
| Conread position: | 4-361 |
| Cow position: | chr18:50083644-50084001 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 125, 120 |
| Conread position: | 4-394 |
| Cow position: | chr18:54668753-54668363 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 259 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 23, 32 |
| Conread position: | 4-400 |
| Cow position: | chr18:54670241-54669841 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 260 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 34, 38 |
| Conread position: | 4-473 |
| Cow position: | chr18:54668837-54668366 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 18 |
| Conread position: | 4-478 |
| Cow position: | chr18:47846491-47846017 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 287 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 274, 259 |
| Conread position: | 4-485 |
| Cow position: | chr18:22844175-22843691 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 292 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 69, 371 |
| Conread position: | 4-492 |
| Cow position: | chr18:22843920-22843423 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 305 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 124, 119 |
| Conread position: | 4-492 |
| Cow position: | chr18:42724478-42723990 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 296 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 27, 21 |
| Conread position: | 4-492 |
| Cow position: | chr18:55497596-55497108 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 263 |
| Conread position: | 5-480 |
| Cow position: | chr18:49032599-49032124 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 298 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 362, 367 |
| Conread position: | 5-480 |
| Cow position: | chr18:56316496-56316971 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 21 |
| Conread position: | 5-487 |
| Cow position: | chr18:54668920-54668438 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 311 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 41, 21 |
| Conread position: | 5-492 |
| Cow position: | chr18:50281785-50282272 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 302 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 20, 31 |
| Conread position: | 5-492 |
| Cow position: | chr18:56329656-56329169 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 91 |
| Conread position: | 5-514 |
| Cow position: | chr18:56316244-56316751 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 367 |
| Conread position: | 11-492 |
| Cow position: | chr18:22844336-22843852 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 302 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 230, 446 |
| Conread position: | 12-369 |
| Cow position: | chr18:42724303-42723944 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 228 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 23, 179 |
| Conread position: | 29-410 |
| Cow position: | chr18:47846718-47846337 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 77, 90 |
| Conread position: | 34-492 |
| Cow position: | chr18:52012469-52012013 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 286 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 34-493 |
| Cow position: | chr18:52012387-52011928 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 77 |
| Conread position: | 35-493 |
| Cow position: | chr18:56330046-56329588 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 85 |
| Conread position: | 36-501 |
| Cow position: | chr18:56329877-56329411 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 337, 329 |
| Conread position: | 40-309 |
| Cow position: | chr18:54664064-54664332 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 88, 20 |
| Conread position: | 40-323 |
| Cow position: | chr18:22843539-22843255 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 78, 70 |
| Conread position: | 41-492 |
| Cow position: | chr18:33064539-33064088 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 271 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 77, 68 |
| Conread position: | 42-493 |
| Cow position: | chr18:49022710-49023161 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 265 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 71, 75 |
| Conread position: | 43-300 |
| Cow position: | chr18:44818619-44818876 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 157, 148 |
| Conread position: | 44-386 |
| Cow position: | chr18:44817891-44818233 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 252, 246 |
| Conread position: | 44-478 |
| Cow position: | chr18:22843796-22843353 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 274 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 67, 75 |
| Conread position: | 54-480 |
| Cow position: | chr18:47846609-47846183 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 58 |
| Conread position: | 55-492 |
| Cow position: | chr18:42724595-42724158 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 268 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 243, 222 |
| Conread position: | 56-492 |
| Cow position: | chr18:53610473-53610037 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 278 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 41, 45 |
| Conread position: | 56-492 |
| Cow position: | chr18:56128115-56128551 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 134, 148 |
| Conread position: | 56-492 |
| Cow position: | chr18:56316379-56316815 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 276 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 48, 62 |
| Conread position: | 56-493 |
| Cow position: | chr18:56128367-56128804 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 58-356 |
| Cow position: | chr18:54669677-54669381 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 140, 131 |
| Conread position: | 60-492 |
| Cow position: | chr18:22844371-22843936 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 265, 380 |
| Conread position: | 60-507 |
| Cow position: | chr18:54668949-54668501 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 278 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 70, 58 |
| Conread position: | 62-316 |
| Cow position: | chr18:54687742-54687996 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 235, 231 |
| Conread position: | 62-492 |
| Cow position: | chr18:53636044-53635614 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 128, 142 |
| Conread position: | 65-492 |
| Cow position: | chr18:56330184-56329757 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 266 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 55, 45 |
| Conread position: | 71-492 |
| Cow position: | chr18:56391590-56391169 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 48 |
| Conread position: | 72-492 |
| Cow position: | chr18:44817748-44818171 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 269 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 30, 25 |
| Conread position: | 80-398 |
| Cow position: | chr18:44818572-44818890 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 42, 50 |
| Conread position: | 85-399 |
| Cow position: | chr18:56391963-56391650 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 188 |
| Conread position: | 118-399 |
| Cow position: | chr18:44944338-44944625 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 19, 99 |
| Conread position: | 123-502 |
| Cow position: | chr18:53636067-53635687 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 163, 154 |
| Conread position: | 124-492 |
| Cow position: | chr18:53610489-53610121 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 228 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 162, 153 |
| Conread position: | 125-393 |
| Cow position: | chr18:54664065-54664332 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 85, 19 |
| Conread position: | 127-440 |
| Cow position: | chr18:44817890-44818203 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 253, 237 |
| Conread position: | 128-439 |
| Cow position: | chr18:42724606-42724295 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 153, 149 |
| Conread position: | 128-469 |
| Cow position: | chr18:56267478-56267137 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 227 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 145, 165 |
| Conread position: | 142-448 |
| Cow position: | chr18:54669677-54669368 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 273, 0 |
| Conread position: | 146-431 |
| Cow position: | chr18:54687742-54688024 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 59, 43 |
| Conread position: | 146-492 |
| Cow position: | chr18:56316049-56316395 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 158-478 |
| Cow position: | chr18:55497694-55497374 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 40, 33 |
| Conread position: | 160-514 |
| Cow position: | chr18:56391972-56391616 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 126, 117 |
| Conread position: | 193-510 |
| Cow position: | chr18:44944329-44944652 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 35, 104 |
| Conread position: | 204-469 |
| Cow position: | chr18:56267486-56267221 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 208-430 |
| Cow position: | chr18:44818616-44818838 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 178, 148 |
| Conread position: | 217-492 |
| Cow position: | chr18:56267557-56267282 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 16 |
| Conread position: | 230-467 |
| Cow position: | chr18:54687742-54687979 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 54, 50 |
| Conread position: | 232-457 |
| Cow position: | chr18:54698249-54698473 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 131, 14 |
| Conread position: | 238-477 |
| Cow position: | chr18:54664093-54664332 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 48, 39 |
Show alignments to all cow chromosomes.