Cow genome map


           Conread name:
           Ss1.1-rlnt23c_n4.5
        

               Conread position:
               1-492
               

               Cow position:
               chr2:82799715-82800206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               303
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               372, 360
               

               Conread position:
               2-432
               

               Cow position:
               chr2:5874824-5874394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               270
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               125, 121
               

               Conread position:
               2-471
               

               Cow position:
               chr2:5874656-5874187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               281
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               43, 39
               

               Conread position:
               2-492
               

               Cow position:
               chr2:82799800-82800290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               288
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               112, 118
               

               Conread position:
               3-493
               

               Cow position:
               chr2:5874907-5874417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               494
               

               Alignm identity:
               306
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               108, 117
               

               Conread position:
               35-492
               

               Cow position:
               chr2:82799665-82800122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               271
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               80-467
               

               Cow position:
               chr2:5875166-5874779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               110, 120
               

               Conread position:
               89-493
               

               Cow position:
               chr2:82799467-82799871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               29, 24
               

               Conread position:
               160-407
               

               Cow position:
               chr2:16555407-16555154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               5, 14
               
Show alignments to all cow chromosomes.