Cow genome map


           Conread name:
           Ss1.1-rlnt23c_n4.5
        

               Conread position:
               1-310
               

               Cow position:
               chr22:12418754-12418445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               115, 105
               

               Conread position:
               1-492
               

               Cow position:
               chr22:12419006-12418515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               299
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               379, 355
               

               Conread position:
               2-354
               

               Cow position:
               chr22:11640628-11640980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               36, 40
               

               Conread position:
               2-487
               

               Cow position:
               chr22:12418921-12418436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               309
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               116, 107
               

               Conread position:
               38-355
               

               Cow position:
               chr22:11701327-11701644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               88, 71
               

               Conread position:
               116-492
               

               Cow position:
               chr22:11701153-11701529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               76, 90
               

               Conread position:
               210-492
               

               Cow position:
               chr22:11640668-11640950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               158, 162
               
Show alignments to all cow chromosomes.