Cow genome map


           Conread name:
           Ss1.1-rlnt23c_n4.5
        

               Conread position:
               1-227
               

               Cow position:
               chr28:34696352-34696578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               45, 28
               

               Conread position:
               2-298
               

               Cow position:
               chr28:33210333-33210630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               228, 0
               

               Conread position:
               2-397
               

               Cow position:
               chr28:34696185-34696580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               272
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               36, 40
               

               Conread position:
               3-480
               

               Cow position:
               chr28:34696102-34696579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 36
               

               Conread position:
               3-492
               

               Cow position:
               chr28:34696018-34696507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 18
               

               Conread position:
               3-493
               

               Cow position:
               chr28:34695850-34696340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               502
               

               Alignm identity:
               318
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               33, 26
               

               Conread position:
               96-492
               

               Cow position:
               chr28:33210259-33210656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               252
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               270, 276
               
Show alignments to all cow chromosomes.