Cow genome map


           Conread name:
           Ss1.1-rlnt23c_n4.5
        

               Conread position:
               1-469
               

               Cow position:
               chr3:20194826-20195294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 106
               

               Conread position:
               1-499
               

               Cow position:
               chr3:20194550-20195072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               526
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 389
               

               Conread position:
               2-263
               

               Cow position:
               chr3:20194467-20194729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               29, 18
               

               Conread position:
               2-479
               

               Cow position:
               chr3:20194743-20195220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 195
               

               Conread position:
               22-492
               

               Cow position:
               chr3:20194676-20195149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 86
               

               Conread position:
               55-492
               

               Cow position:
               chr3:20194436-20194897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               303
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               60, 54
               

               Conread position:
               62-315
               

               Cow position:
               chr3:63430872-63431125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               139-407
               

               Cow position:
               chr3:20194436-20194703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               195
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               242, 222
               
Show alignments to all cow chromosomes.