Cow genome map
| Conread name: | Ss1.1-rlnt23c_n4.5 | 
| Conread position: | 1-492 | 
| Cow position: | chr6:49428836-49429327 (view UCSC Genome Browser custom track) | 
| Alignm length: | 494 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 289, 296 | 
| Conread position: | 1-499 | 
| Cow position: | chr6:49428332-49428830 (view UCSC Genome Browser custom track) | 
| Alignm length: | 505 | 
| Alignm identity: | 347 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 26, 43 | 
| Conread position: | 2-231 | 
| Cow position: | chr6:49429257-49429486 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 38, 43 | 
| Conread position: | 2-456 | 
| Cow position: | chr6:49428753-49429207 (view UCSC Genome Browser custom track) | 
| Alignm length: | 458 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 18 | 
| Conread position: | 2-478 | 
| Cow position: | chr6:49429005-49429481 (view UCSC Genome Browser custom track) | 
| Alignm length: | 481 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 114, 109 | 
| Conread position: | 2-492 | 
| Cow position: | chr6:49428249-49428739 (view UCSC Genome Browser custom track) | 
| Alignm length: | 496 | 
| Alignm identity: | 338 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 120, 126 | 
| Conread position: | 2-492 | 
| Cow position: | chr6:49428669-49429159 (view UCSC Genome Browser custom track) | 
| Alignm length: | 494 | 
| Alignm identity: | 339 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 36 | 
| Conread position: | 2-514 | 
| Cow position: | chr6:49428585-49429095 (view UCSC Genome Browser custom track) | 
| Alignm length: | 517 | 
| Alignm identity: | 360 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 19 | 
| Conread position: | 4-492 | 
| Cow position: | chr6:49428503-49428991 (view UCSC Genome Browser custom track) | 
| Alignm length: | 495 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 26, 40 | 
| Conread position: | 4-492 | 
| Cow position: | chr6:49428923-49429411 (view UCSC Genome Browser custom track) | 
| Alignm length: | 492 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 112, 107 | 
| Conread position: | 5-492 | 
| Cow position: | chr6:49428420-49428907 (view UCSC Genome Browser custom track) | 
| Alignm length: | 494 | 
| Alignm identity: | 341 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 47, 35 | 
| Conread position: | 51-492 | 
| Cow position: | chr6:49428214-49428655 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 77 | 
Show alignments to all cow chromosomes.
