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Cow genome map

           
Conread name:
           
Ss1.1-rlyg12_g11.5
        

               
Conread position:
               
77-484
               

               
Cow position:
               
chr28:11884766-11884357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 11
               

               
Conread position:
               
82-485
               

               
Cow position:
               
chr28:4016289-4016698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 36
               

               
Conread position:
               
83-290
               

               
Cow position:
               
chr28:16253095-16252892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
53, 13
               

               
Conread position:
               
83-387
               

               
Cow position:
               
chr28:11786948-11786642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
10, 69
               

               
Conread position:
               
83-492
               

               
Cow position:
               
chr28:3144130-3143706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
52, 68
               

               
Conread position:
               
84-296
               

               
Cow position:
               
chr28:5773401-5773611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
7, 68
               

               
Conread position:
               
85-245
               

               
Cow position:
               
chr28:8372234-8372397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
86-290
               

               
Cow position:
               
chr28:2279899-2279698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
48, 10
               

               
Conread position:
               
86-293
               

               
Cow position:
               
chr28:13693516-13693722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
151, 11
               

               
Conread position:
               
87-297
               

               
Cow position:
               
chr28:17029949-17029744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
48, 9
               

               
Conread position:
               
87-334
               

               
Cow position:
               
chr28:19222831-19222580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
44, 9
               

               
Conread position:
               
87-417
               

               
Cow position:
               
chr28:23675909-23676241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
48, 64
               

               
Conread position:
               
87-492
               

               
Cow position:
               
chr28:5817613-5818017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
49, 29
               

               
Conread position:
               
88-214
               

               
Cow position:
               
chr28:10295956-10296085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
43, 73
               

               
Conread position:
               
88-223
               

               
Cow position:
               
chr28:16879501-16879373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
88-259
               

               
Cow position:
               
chr28:5805292-5805454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
47, 12
               

               
Conread position:
               
88-263
               

               
Cow position:
               
chr28:16441154-16441324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
123, 62
               

               
Conread position:
               
88-278
               

               
Cow position:
               
chr28:4888989-4888795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
88-279
               

               
Cow position:
               
chr28:34008180-34007985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
88-280
               

               
Cow position:
               
chr28:21104080-21103878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
88-286
               

               
Cow position:
               
chr28:8682084-8681878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
88-287
               

               
Cow position:
               
chr28:7328669-7328860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
43, 62
               

               
Conread position:
               
88-288
               

               
Cow position:
               
chr28:12048932-12048738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
88-289
               

               
Cow position:
               
chr28:23530631-23530836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
14, 45
               

               
Conread position:
               
88-292
               

               
Cow position:
               
chr28:13176912-13176714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
47, 132
               

               
Conread position:
               
88-292
               

               
Cow position:
               
chr28:22170951-22170746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
47, 63
               

               
Conread position:
               
88-294
               

               
Cow position:
               
chr28:25563843-25564052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
47, 67
               

               
Conread position:
               
88-296
               

               
Cow position:
               
chr28:2905347-2905546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
44, 63
               

               
Conread position:
               
88-296
               

               
Cow position:
               
chr28:6051499-6051707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
47, 169
               

               
Conread position:
               
88-296
               

               
Cow position:
               
chr28:8084464-8084674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
24, 91
               

               
Conread position:
               
88-296
               

               
Cow position:
               
chr28:23231300-23231091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
51, 32
               

               
Conread position:
               
88-296
               

               
Cow position:
               
chr28:24646307-24646509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
47, 162
               

               
Conread position:
               
88-297
               

               
Cow position:
               
chr28:4880497-4880293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
47, 63
               

               
Conread position:
               
88-299
               

               
Cow position:
               
chr28:4022149-4022362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
47, 96
               

               
Conread position:
               
88-300
               

               
Cow position:
               
chr28:26781850-26782063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
47, 196
               

               
Conread position:
               
88-301
               

               
Cow position:
               
chr28:12651369-12651584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
47, 199
               

               
Conread position:
               
88-322
               

               
Cow position:
               
chr28:9267867-9268099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
47, 162
               

               
Conread position:
               
88-334
               

               
Cow position:
               
chr28:28076641-28076397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
48, 63
               

               
Conread position:
               
88-337
               

               
Cow position:
               
chr28:16243992-16243742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
43, 70
               

               
Conread position:
               
88-369
               

               
Cow position:
               
chr28:14657467-14657754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
47, 63
               

               
Conread position:
               
88-374
               

               
Cow position:
               
chr28:7751534-7751239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
47, 162
               

               
Conread position:
               
88-386
               

               
Cow position:
               
chr28:5826715-5827024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
43, 56
               

               
Conread position:
               
88-391
               

               
Cow position:
               
chr28:23621315-23621616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
210, 8
               

               
Conread position:
               
88-395
               

               
Cow position:
               
chr28:4536237-4536542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
43, 63
               

               
Conread position:
               
88-395
               

               
Cow position:
               
chr28:4841630-4841307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
41, 162
               

               
Conread position:
               
88-401
               

               
Cow position:
               
chr28:16686799-16687115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
148, 50
               

               
Conread position:
               
88-418
               

               
Cow position:
               
chr28:8022344-8021999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 52
               

               
Conread position:
               
88-418
               

               
Cow position:
               
chr28:12619329-12619678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
45, 323
               

               
Conread position:
               
88-420
               

               
Cow position:
               
chr28:2862628-2862974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 194
               

               
Conread position:
               
88-442
               

               
Cow position:
               
chr28:11752378-11752011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 163
               

               
Conread position:
               
88-449
               

               
Cow position:
               
chr28:26220028-26220393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 63
               

               
Conread position:
               
88-451
               

               
Cow position:
               
chr28:2898762-2899124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 67
               

               
Conread position:
               
88-451
               

               
Cow position:
               
chr28:19026236-19025870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
47, 64
               

               
Conread position:
               
88-451
               

               
Cow position:
               
chr28:29199494-29199865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
47, 8
               

               
Conread position:
               
88-451
               

               
Cow position:
               
chr28:31110238-31109866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
47, 15
               

               
Conread position:
               
88-465
               

               
Cow position:
               
chr28:6059706-6059321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
46, 159
               

               
Conread position:
               
88-465
               

               
Cow position:
               
chr28:25596399-25596775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 63
               

               
Conread position:
               
88-472
               

               
Cow position:
               
chr28:20313042-20313434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
43, 39
               

               
Conread position:
               
88-478
               

               
Cow position:
               
chr28:5931120-5931511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
43, 78
               

               
Conread position:
               
88-479
               

               
Cow position:
               
chr28:26103482-26103864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
43, 63
               

               
Conread position:
               
88-481
               

               
Cow position:
               
chr28:11423037-11422647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 30
               

               
Conread position:
               
88-485
               

               
Cow position:
               
chr28:17638100-17637689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
47, 67
               

               
Conread position:
               
88-485
               

               
Cow position:
               
chr28:22332316-22332703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 33
               

               
Conread position:
               
88-485
               

               
Cow position:
               
chr28:22345786-22346197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 33
               

               
Conread position:
               
88-488
               

               
Cow position:
               
chr28:11426778-11426373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 15
               

               
Conread position:
               
88-488
               

               
Cow position:
               
chr28:16211330-16210926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 203
               

               
Conread position:
               
88-488
               

               
Cow position:
               
chr28:23616169-23616580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
47, 76
               

               
Conread position:
               
88-489
               

               
Cow position:
               
chr28:4938605-4938972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 63
               

               
Conread position:
               
88-490
               

               
Cow position:
               
chr28:2961056-2960654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
201, 15
               

               
Conread position:
               
88-490
               

               
Cow position:
               
chr28:34430660-34430246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 313
               

               
Conread position:
               
88-492
               

               
Cow position:
               
chr28:3914477-3914884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
88-492
               

               
Cow position:
               
chr28:4282725-4282310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 102
               

               
Conread position:
               
88-492
               

               
Cow position:
               
chr28:7512825-7512402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
49, 327
               

               
Conread position:
               
88-492
               

               
Cow position:
               
chr28:9285611-9285198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 280
               

               
Conread position:
               
88-492
               

               
Cow position:
               
chr28:9636690-9636278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 318
               

               
Conread position:
               
88-492
               

               
Cow position:
               
chr28:11585441-11585030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 82
               

               
Conread position:
               
88-492
               

               
Cow position:
               
chr28:20124552-20124960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 63
               

               
Conread position:
               
88-492
               

               
Cow position:
               
chr28:24966155-24966565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 15
               

               
Conread position:
               
88-492
               

               
Cow position:
               
chr28:33884176-33884581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
61, 45
               

               
Conread position:
               
88-492
               

               
Cow position:
               
chr28:34229996-34230410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 104
               

               
Conread position:
               
88-492
               

               
Cow position:
               
chr28:34442997-34442577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
44, 240
               

               
Conread position:
               
89-299
               

               
Cow position:
               
chr28:9390597-9390387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
42, 95
               

               
Conread position:
               
89-492
               

               
Cow position:
               
chr28:12951200-12951595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
46, 66
               

               
Conread position:
               
89-492
               

               
Cow position:
               
chr28:27218088-27218504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 295
               

               
Conread position:
               
90-300
               

               
Cow position:
               
chr28:7980650-7980443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
45, 174
               

               
Conread position:
               
90-442
               

               
Cow position:
               
chr28:13865614-13865968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
46, 57
               

               
Conread position:
               
90-451
               

               
Cow position:
               
chr28:2132153-2131789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 111
               

               
Conread position:
               
90-479
               

               
Cow position:
               
chr28:3408450-3408056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 193
               

               
Conread position:
               
90-488
               

               
Cow position:
               
chr28:7268168-7267774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 38
               

               
Conread position:
               
90-492
               

               
Cow position:
               
chr28:9099703-9100108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
30, 109
               

               
Conread position:
               
90-492
               

               
Cow position:
               
chr28:16204564-16204151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 315
               

               
Conread position:
               
91-251
               

               
Cow position:
               
chr28:5366360-5366199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
44, 18
               

               
Conread position:
               
91-260
               

               
Cow position:
               
chr28:21129352-21129188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
91-292
               

               
Cow position:
               
chr28:7590412-7590211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
44, 60
               

               
Conread position:
               
91-292
               

               
Cow position:
               
chr28:13607656-13607855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
43, 61
               

               
Conread position:
               
91-292
               

               
Cow position:
               
chr28:15007934-15008131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
49, 67
               

               
Conread position:
               
91-292
               

               
Cow position:
               
chr28:26784696-26784495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
40, 7
               

               
Conread position:
               
91-294
               

               
Cow position:
               
chr28:19295591-19295386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
44, 101
               

               
Conread position:
               
91-297
               

               
Cow position:
               
chr28:23775816-23776020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
40, 6
               

               
Conread position:
               
91-307
               

               
Cow position:
               
chr28:34878203-34877985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
43, 59
               

               
Conread position:
               
91-334
               

               
Cow position:
               
chr28:10642248-10642006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
120, 47
               

               
Conread position:
               
91-408
               

               
Cow position:
               
chr28:8408509-8408828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
202, 59
               

               
Conread position:
               
91-418
               

               
Cow position:
               
chr28:18591040-18591374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
44, 26
               

               
Conread position:
               
91-431
               

               
Cow position:
               
chr28:26719131-26719460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 7
               

               
Conread position:
               
91-434
               

               
Cow position:
               
chr28:23007956-23007610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
44, 60
               

               
Conread position:
               
91-436
               

               
Cow position:
               
chr28:14494602-14494944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
25, 167
               

               
Conread position:
               
91-449
               

               
Cow position:
               
chr28:33051790-33052169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 331
               

               
Conread position:
               
91-450
               

               
Cow position:
               
chr28:14649118-14649479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 58
               

               
Conread position:
               
91-450
               

               
Cow position:
               
chr28:19222375-19222016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
45, 7
               

               
Conread position:
               
91-451
               

               
Cow position:
               
chr28:19080078-19079710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
40, 317
               

               
Conread position:
               
91-452
               

               
Cow position:
               
chr28:5771139-5771502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
44, 60
               

               
Conread position:
               
91-454
               

               
Cow position:
               
chr28:25762799-25763159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
40, 60
               

               
Conread position:
               
91-480
               

               
Cow position:
               
chr28:11687262-11686851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
43, 6
               

               
Conread position:
               
91-488
               

               
Cow position:
               
chr28:3745972-3746372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 6
               

               
Conread position:
               
91-488
               

               
Cow position:
               
chr28:24672044-24672443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
44, 7
               

               
Conread position:
               
91-490
               

               
Cow position:
               
chr28:23459914-23460321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
43, 246
               

               
Conread position:
               
91-491
               

               
Cow position:
               
chr28:16919392-16918996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 100
               

               
Conread position:
               
91-492
               

               
Cow position:
               
chr28:750997-751407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
44, 6
               

               
Conread position:
               
91-492
               

               
Cow position:
               
chr28:1099871-1099498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
43, 6
               

               
Conread position:
               
91-492
               

               
Cow position:
               
chr28:3078908-3078517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
40, 59
               

               
Conread position:
               
91-492
               

               
Cow position:
               
chr28:5144753-5144335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
40, 61
               

               
Conread position:
               
91-492
               

               
Cow position:
               
chr28:18790781-18791213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
44, 17
               

               
Conread position:
               
91-492
               

               
Cow position:
               
chr28:30327311-30326922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
41, 12
               

               
Conread position:
               
92-197
               

               
Cow position:
               
chr28:23254028-23253922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
57, 41
               

               
Conread position:
               
92-258
               

               
Cow position:
               
chr28:20760153-20759984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
92-281
               

               
Cow position:
               
chr28:17738308-17738115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
92-285
               

               
Cow position:
               
chr28:3077763-3077952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
39, 58
               

               
Conread position:
               
92-289
               

               
Cow position:
               
chr28:15375055-15374855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
44, 142
               

               
Conread position:
               
92-292
               

               
Cow position:
               
chr28:23839979-23840171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
43, 59
               

               
Conread position:
               
92-292
               

               
Cow position:
               
chr28:34082251-34082047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
41, 106
               

               
Conread position:
               
92-294
               

               
Cow position:
               
chr28:13267552-13267759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
92-294
               

               
Cow position:
               
chr28:15063569-15063369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
41, 158
               

               
Conread position:
               
92-295
               

               
Cow position:
               
chr28:3751089-3751285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
40, 59
               

               
Conread position:
               
92-296
               

               
Cow position:
               
chr28:10888434-10888637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
42, 157
               

               
Conread position:
               
92-296
               

               
Cow position:
               
chr28:15688811-15689014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
43, 60
               

               
Conread position:
               
92-296
               

               
Cow position:
               
chr28:25498733-25498532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
40, 125
               

               
Conread position:
               
92-307
               

               
Cow position:
               
chr28:11380272-11380058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
43, 128
               

               
Conread position:
               
92-313
               

               
Cow position:
               
chr28:4057757-4057975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
204, 58
               

               
Conread position:
               
92-316
               

               
Cow position:
               
chr28:8348882-8348658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
43, 94
               

               
Conread position:
               
92-318
               

               
Cow position:
               
chr28:30978052-30978271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
145, 47
               

               
Conread position:
               
92-322
               

               
Cow position:
               
chr28:8656965-8656736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
119, 20
               

               
Conread position:
               
92-338
               

               
Cow position:
               
chr28:28472026-28472278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
92-360
               

               
Cow position:
               
chr28:5904506-5904780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
43, 59
               

               
Conread position:
               
92-374
               

               
Cow position:
               
chr28:4914331-4914029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
92-381
               

               
Cow position:
               
chr28:7549292-7548989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 119
               

               
Conread position:
               
92-381
               

               
Cow position:
               
chr28:25070887-25071188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
39, 104
               

               
Conread position:
               
92-383
               

               
Cow position:
               
chr28:14151005-14151293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
42, 53
               

               
Conread position:
               
92-383
               

               
Cow position:
               
chr28:24368180-24367872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
39, 278
               

               
Conread position:
               
92-387
               

               
Cow position:
               
chr28:21502165-21502467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
43, 59
               

               
Conread position:
               
92-387
               

               
Cow position:
               
chr28:21672569-21672868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
40, 91
               

               
Conread position:
               
92-434
               

               
Cow position:
               
chr28:21598483-21598130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
45, 59
               

               
Conread position:
               
92-445
               

               
Cow position:
               
chr28:18354548-18354196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
39, 58
               

               
Conread position:
               
92-449
               

               
Cow position:
               
chr28:21354995-21355364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
43, 66
               

               
Conread position:
               
92-449
               

               
Cow position:
               
chr28:25399660-25400004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
47, 59
               

               
Conread position:
               
92-450
               

               
Cow position:
               
chr28:22321192-22321556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
39, 311
               

               
Conread position:
               
92-451
               

               
Cow position:
               
chr28:6971569-6971211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
202, 51
               

               
Conread position:
               
92-451
               

               
Cow position:
               
chr28:7684907-7684569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
92-451
               

               
Cow position:
               
chr28:16109715-16110076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
42, 58
               

               
Conread position:
               
92-451
               

               
Cow position:
               
chr28:26340107-26340466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
42, 149
               

               
Conread position:
               
92-455
               

               
Cow position:
               
chr28:23410553-23410184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
43, 59
               

               
Conread position:
               
92-459
               

               
Cow position:
               
chr28:25249126-25249495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
43, 63
               

               
Conread position:
               
92-464
               

               
Cow position:
               
chr28:10172643-10172268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 135
               

               
Conread position:
               
92-470
               

               
Cow position:
               
chr28:16386735-16386362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
43, 59
               

               
Conread position:
               
92-475
               

               
Cow position:
               
chr28:10977635-10978002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
34, 61
               

               
Conread position:
               
92-481
               

               
Cow position:
               
chr28:4070739-4071129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 62
               

               
Conread position:
               
92-481
               

               
Cow position:
               
chr28:25056743-25057127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 63
               

               
Conread position:
               
92-488
               

               
Cow position:
               
chr28:5684475-5684875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 104
               

               
Conread position:
               
92-490
               

               
Cow position:
               
chr28:9426571-9426175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
118, 40
               

               
Conread position:
               
92-490
               

               
Cow position:
               
chr28:14997834-14998241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 24
               

               
Conread position:
               
92-490
               

               
Cow position:
               
chr28:16346756-16346359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 59
               

               
Conread position:
               
92-492
               

               
Cow position:
               
chr28:2801013-2801406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
39, 110
               

               
Conread position:
               
92-492
               

               
Cow position:
               
chr28:3493014-3492608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 60
               

               
Conread position:
               
92-492
               

               
Cow position:
               
chr28:7698212-7697800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
43, 73
               

               
Conread position:
               
92-492
               

               
Cow position:
               
chr28:9740242-9740637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
44, 52
               

               
Conread position:
               
92-492
               

               
Cow position:
               
chr28:12430379-12430786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 60
               

               
Conread position:
               
92-492
               

               
Cow position:
               
chr28:13474076-13474478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 59
               

               
Conread position:
               
92-492
               

               
Cow position:
               
chr28:15272490-15272091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
43, 59
               

               
Conread position:
               
92-492
               

               
Cow position:
               
chr28:16370304-16369910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 59
               

               
Conread position:
               
92-492
               

               
Cow position:
               
chr28:22132697-22133087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
39, 60
               

               
Conread position:
               
92-492
               

               
Cow position:
               
chr28:26743392-26743810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
42, 58
               

               
Conread position:
               
93-292
               

               
Cow position:
               
chr28:25424531-25424330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
42, 114
               

               
Conread position:
               
93-295
               

               
Cow position:
               
chr28:11451695-11451491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
42, 77
               

               
Conread position:
               
93-298
               

               
Cow position:
               
chr28:15263953-15263741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
93-383
               

               
Cow position:
               
chr28:10682046-10681754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
42, 34
               

               
Conread position:
               
93-387
               

               
Cow position:
               
chr28:10534158-10533860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
93-451
               

               
Cow position:
               
chr28:12964349-12964704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 56
               

               
Conread position:
               
93-454
               

               
Cow position:
               
chr28:16085096-16085464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
42, 58
               

               
Conread position:
               
93-490
               

               
Cow position:
               
chr28:30303422-30303031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
42, 5
               

               
Conread position:
               
93-491
               

               
Cow position:
               
chr28:33163696-33163298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
42, 267
               

               
Conread position:
               
93-492
               

               
Cow position:
               
chr28:10744981-10745394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
41, 58
               

               
Conread position:
               
94-485
               

               
Cow position:
               
chr28:21363531-21363915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
205, 29
               

               
Conread position:
               
95-222
               

               
Cow position:
               
chr28:8629003-8628877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
36, 56
               

               
Conread position:
               
96-299
               

               
Cow position:
               
chr28:7607002-7607211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
96-299
               

               
Cow position:
               
chr28:27428527-27428720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 55
               

               
Conread position:
               
96-313
               

               
Cow position:
               
chr28:5658328-5658545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
35, 55
               

               
Conread position:
               
96-350
               

               
Cow position:
               
chr28:17316633-17316903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
42, 190
               

               
Conread position:
               
96-376
               

               
Cow position:
               
chr28:18717348-18717066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
37, 55
               

               
Conread position:
               
96-385
               

               
Cow position:
               
chr28:10529708-10529417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
39, 52
               

               
Conread position:
               
96-418
               

               
Cow position:
               
chr28:34561133-34561447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 54
               

               
Conread position:
               
96-436
               

               
Cow position:
               
chr28:26922590-26922248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
96-485
               

               
Cow position:
               
chr28:21844730-21845126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 156
               

               
Conread position:
               
96-490
               

               
Cow position:
               
chr28:21868226-21868634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 316
               

               
Conread position:
               
96-492
               

               
Cow position:
               
chr28:3024137-3023737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
96-492
               

               
Cow position:
               
chr28:8347509-8347913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 55
               

               
Conread position:
               
98-369
               

               
Cow position:
               
chr28:12758732-12758443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
98-387
               

               
Cow position:
               
chr28:25806359-25806648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
33, 51
               

               
Conread position:
               
98-418
               

               
Cow position:
               
chr28:7228609-7228286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
37, 144
               

               
Conread position:
               
98-420
               

               
Cow position:
               
chr28:26614665-26614979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
98-431
               

               
Cow position:
               
chr28:14234749-14235069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
37, 57
               

               
Conread position:
               
98-451
               

               
Cow position:
               
chr28:26533319-26533678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
37, 299
               

               
Conread position:
               
98-485
               

               
Cow position:
               
chr28:5203976-5204362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 53
               

               
Conread position:
               
98-485
               

               
Cow position:
               
chr28:10053562-10053157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
37, 321
               

               
Conread position:
               
98-490
               

               
Cow position:
               
chr28:8787322-8787716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 52
               

               
Conread position:
               
98-492
               

               
Cow position:
               
chr28:5074727-5074342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
37, 5
               

               
Conread position:
               
100-373
               

               
Cow position:
               
chr28:2738033-2737745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
35, 141
               

               
Conread position:
               
101-434
               

               
Cow position:
               
chr28:28163872-28164206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
31, 5
               

               
Conread position:
               
103-296
               

               
Cow position:
               
chr28:6861736-6861928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
14, 22
               

               
Conread position:
               
103-434
               

               
Cow position:
               
chr28:7865105-7865449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 34
               

               
Conread position:
               
103-436
               

               
Cow position:
               
chr28:5128946-5128605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 14
               

               
Conread position:
               
103-490
               

               
Cow position:
               
chr28:18625004-18625414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
31, 316
               

               
Conread position:
               
103-492
               

               
Cow position:
               
chr28:5188620-5188251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
32, 48
               

               
Conread position:
               
103-492
               

               
Cow position:
               
chr28:11527474-11527080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 35
               

               
Conread position:
               
104-300
               

               
Cow position:
               
chr28:16364186-16363990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
28, 54
               

               
Conread position:
               
105-427
               

               
Cow position:
               
chr28:15044071-15043749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
181, 25
               

               
Conread position:
               
106-372
               

               
Cow position:
               
chr28:3256578-3256858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
106-374
               

               
Cow position:
               
chr28:4587881-4588159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 159
               

               
Conread position:
               
106-477
               

               
Cow position:
               
chr28:22371894-22371508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 312
               

               
Conread position:
               
106-491
               

               
Cow position:
               
chr28:5236818-5236417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
29, 55
               

               
Conread position:
               
107-296
               

               
Cow position:
               
chr28:9108227-9108420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
108-285
               

               
Cow position:
               
chr28:17625350-17625169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
110-490
               

               
Cow position:
               
chr28:12598134-12598513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
25, 188
               

               
Conread position:
               
111-475
               

               
Cow position:
               
chr28:8963313-8963674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
24, 163
               

               
Conread position:
               
111-488
               

               
Cow position:
               
chr28:29416927-29416550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 126
               

               
Conread position:
               
112-395
               

               
Cow position:
               
chr28:25282995-25283277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
23, 33
               

               
Conread position:
               
112-492
               

               
Cow position:
               
chr28:4884476-4884074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 140
               

               
Conread position:
               
112-492
               

               
Cow position:
               
chr28:5437301-5436907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 282
               

               
Conread position:
               
115-317
               

               
Cow position:
               
chr28:8935727-8935932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
17, 153
               

               
Conread position:
               
118-477
               

               
Cow position:
               
chr28:9684520-9684173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
33, 7
               

               
Conread position:
               
118-490
               

               
Cow position:
               
chr28:4090248-4089882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 33
               

               
Conread position:
               
118-492
               

               
Cow position:
               
chr28:6091157-6091535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
31, 130
               

               
Conread position:
               
123-377
               

               
Cow position:
               
chr28:10844920-10845172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
12, 32
               

               
Conread position:
               
123-492
               

               
Cow position:
               
chr28:4138868-4138488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
12, 28
               

               
Conread position:
               
124-485
               

               
Cow position:
               
chr28:4809596-4809947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 110
               

               
Conread position:
               
128-292
               

               
Cow position:
               
chr28:118248-118082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
21, 71
               

               
Conread position:
               
130-492
               

               
Cow position:
               
chr28:26982937-26982557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
21, 270
               

               
Conread position:
               
131-314
               

               
Cow position:
               
chr28:3169380-3169207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
131-367
               

               
Cow position:
               
chr28:3000784-3000553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
18, 47
               

               
Conread position:
               
131-485
               

               
Cow position:
               
chr28:30937856-30937506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 215
               

               
Conread position:
               
131-492
               

               
Cow position:
               
chr28:4835035-4834664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 134
               

               
Conread position:
               
133-492
               

               
Cow position:
               
chr28:23724643-23724290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
47, 17
               

               
Conread position:
               
134-484
               

               
Cow position:
               
chr28:4881431-4881072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
77, 16
               

               
Conread position:
               
134-491
               

               
Cow position:
               
chr28:11829129-11828781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 122
               

               
Conread position:
               
135-492
               

               
Cow position:
               
chr28:13290318-13289978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
150-451
               

               
Cow position:
               
chr28:2752669-2752359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
67, 41
               

               
Conread position:
               
152-492
               

               
Cow position:
               
chr28:11762531-11762877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 58
               

               
Conread position:
               
157-451
               

               
Cow position:
               
chr28:657613-657340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
140, 7
               

               
Conread position:
               
157-488
               

               
Cow position:
               
chr28:4643928-4643595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
118, 60
               

               
Conread position:
               
157-492
               

               
Cow position:
               
chr28:4158793-4159143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 97
               

               
Conread position:
               
157-492
               

               
Cow position:
               
chr28:29989278-29988930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 98
               

               
Conread position:
               
162-451
               

               
Cow position:
               
chr28:4440143-4440431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
54, 72
               

               
Conread position:
               
164-423
               

               
Cow position:
               
chr28:2872760-2873028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
102, 6
               

               
Conread position:
               
165-418
               

               
Cow position:
               
chr28:16841903-16841664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
166-492
               

               
Cow position:
               
chr28:8358748-8359079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
168-418
               

               
Cow position:
               
chr28:24017843-24018088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
66, 90
               

               
Conread position:
               
168-480
               

               
Cow position:
               
chr28:24082116-24082437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
58, 21
               

               
Conread position:
               
169-316
               

               
Cow position:
               
chr28:7608133-7607986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
177-450
               

               
Cow position:
               
chr28:4355403-4355680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
40, 79
               

               
Conread position:
               
177-485
               

               
Cow position:
               
chr28:10863927-10863623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
109, 58
               

               
Conread position:
               
177-492
               

               
Cow position:
               
chr28:30746873-30746559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
109, 100
               

               
Conread position:
               
182-454
               

               
Cow position:
               
chr28:27161470-27161189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
29, 21
               

               
Conread position:
               
185-479
               

               
Cow position:
               
chr28:7009112-7008815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
98, 45
               

               
Conread position:
               
190-489
               

               
Cow position:
               
chr28:8140350-8140662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
102, 219
               

               
Conread position:
               
193-492
               

               
Cow position:
               
chr28:11346614-11346310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
26, 203
               

               
Conread position:
               
195-451
               

               
Cow position:
               
chr28:32174506-32174764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
99, 9
               

               
Conread position:
               
201-492
               

               
Cow position:
               
chr28:11079185-11079479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
94, 161
               

               
Conread position:
               
205-490
               

               
Cow position:
               
chr28:23296206-23296496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 192
               

               
Conread position:
               
207-490
               

               
Cow position:
               
chr28:25128768-25129061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
96, 163
               

               
Conread position:
               
209-462
               

               
Cow position:
               
chr28:5577412-5577676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
90, 189
               

               
Conread position:
               
209-492
               

               
Cow position:
               
chr28:22813152-22813427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
89, 39
               

               
Conread position:
               
216-431
               

               
Cow position:
               
chr28:16246169-16245948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
47, 149
               

               
Conread position:
               
220-479
               

               
Cow position:
               
chr28:11307610-11307348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
196, 176
               

               
Conread position:
               
220-490
               

               
Cow position:
               
chr28:4181900-4182178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
13, 186
               

               
Conread position:
               
222-485
               

               
Cow position:
               
chr28:8396262-8396501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
232-490
               

               
Cow position:
               
chr28:3740792-3741046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
60, 12
               

               
Conread position:
               
240-485
               

               
Cow position:
               
chr28:7350575-7350825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 164
               

               
Conread position:
               
241-492
               

               
Cow position:
               
chr28:5139078-5138820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
52, 172
               

               
Conread position:
               
255-410
               

               
Cow position:
               
chr28:4361505-4361352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
256-490
               

               
Cow position:
               
chr28:4013020-4013260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
33, 148
               

               
Conread position:
               
260-490
               

               
Cow position:
               
chr28:3445545-3445303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
32, 120
               

               
Conread position:
               
260-492
               

               
Cow position:
               
chr28:7132138-7131912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
262-492
               

               
Cow position:
               
chr28:4006735-4006960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
38, 79
               

               
Conread position:
               
269-491
               

               
Cow position:
               
chr28:11016370-11016582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
82, 23
               

               
Conread position:
               
269-492
               

               
Cow position:
               
chr28:7557776-7557551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
149, 34
               

               
Conread position:
               
285-451
               

               
Cow position:
               
chr28:7498174-7498008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
144, 111
               

               
Conread position:
               
287-477
               

               
Cow position:
               
chr28:26531301-26531114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
141, 14
               

               
Conread position:
               
287-492
               

               
Cow position:
               
chr28:777650-777855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
118, 110
               

               
Conread position:
               
287-492
               

               
Cow position:
               
chr28:3411012-3410810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
101, 142
               

               
Conread position:
               
287-492
               

               
Cow position:
               
chr28:6975216-6975413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
287-492
               

               
Cow position:
               
chr28:12991111-12991314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
48, 116
               

               
Conread position:
               
287-492
               

               
Cow position:
               
chr28:17949138-17948938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
287-492
               

               
Cow position:
               
chr28:19564253-19564056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
288-465
               

               
Cow position:
               
chr28:7619175-7619003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
10, 110
               

               
Conread position:
               
288-482
               

               
Cow position:
               
chr28:10775737-10775542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
56, 91
               

               
Conread position:
               
288-485
               

               
Cow position:
               
chr28:17739801-17739997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
141, 50
               

               
Conread position:
               
288-492
               

               
Cow position:
               
chr28:4045825-4046023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
170, 27
               

               
Conread position:
               
288-492
               

               
Cow position:
               
chr28:9705629-9705835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
141, 67
               

               
Conread position:
               
289-490
               

               
Cow position:
               
chr28:8304224-8304419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
45, 64
               

               
Conread position:
               
290-485
               

               
Cow position:
               
chr28:24646571-24646760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
290-492
               

               
Cow position:
               
chr28:2279612-2279423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
5, 53
               

               
Conread position:
               
292-492
               

               
Cow position:
               
chr28:5254854-5255050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
297-479
               

               
Cow position:
               
chr28:29850830-29850656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
297-492
               

               
Cow position:
               
chr28:16879558-16879747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
304-467
               

               
Cow position:
               
chr28:4364830-4364671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
143, 51
               

               
Conread position:
               
304-492
               

               
Cow position:
               
chr28:19039027-19038839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
122, 92
               

               
Conread position:
               
308-492
               

               
Cow position:
               
chr28:30902122-30902300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
319-492
               

               
Cow position:
               
chr28:10890728-10890563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
320-491
               

               
Cow position:
               
chr28:4876451-4876616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
320-492
               

               
Cow position:
               
chr28:9109224-9109390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
336-492
               

               
Cow position:
               
chr28:3678386-3678538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
340-492
               

               
Cow position:
               
chr28:26868123-26867975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               
Show alignments to all cow chromosomes.