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Cow genome map

           
Conread name:
           
Ss1.1-rlyg12_g11.5
        

               
Conread position:
               
6-485
               

               
Cow position:
               
chr5:69461039-69461529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 68
               

               
Conread position:
               
58-490
               

               
Cow position:
               
chr5:5855636-5856059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
77, 93
               

               
Conread position:
               
72-271
               

               
Cow position:
               
chr5:69099301-69099501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
61, 9
               

               
Conread position:
               
76-337
               

               
Cow position:
               
chr5:60126146-60126419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
13, 77
               

               
Conread position:
               
77-485
               

               
Cow position:
               
chr5:47317194-47316778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
56, 74
               

               
Conread position:
               
78-383
               

               
Cow position:
               
chr5:8178955-8179274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
79-292
               

               
Cow position:
               
chr5:38838280-38838064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
56, 206
               

               
Conread position:
               
79-292
               

               
Cow position:
               
chr5:42744571-42744774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
52, 62
               

               
Conread position:
               
81-412
               

               
Cow position:
               
chr5:20407887-20407559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 94
               

               
Conread position:
               
83-285
               

               
Cow position:
               
chr5:10261457-10261255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
56, 142
               

               
Conread position:
               
83-306
               

               
Cow position:
               
chr5:55821147-55821379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
8, 22
               

               
Conread position:
               
83-307
               

               
Cow position:
               
chr5:32956310-32956091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
83-492
               

               
Cow position:
               
chr5:32339195-32338759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
14, 189
               

               
Conread position:
               
84-423
               

               
Cow position:
               
chr5:57626588-57626917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
7, 68
               

               
Conread position:
               
84-451
               

               
Cow position:
               
chr5:35969325-35969688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 66
               

               
Conread position:
               
84-490
               

               
Cow position:
               
chr5:69337611-69338013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 26
               

               
Conread position:
               
84-491
               

               
Cow position:
               
chr5:26467403-26467828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 24
               

               
Conread position:
               
84-492
               

               
Cow position:
               
chr5:6504097-6503675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
51, 65
               

               
Conread position:
               
84-492
               

               
Cow position:
               
chr5:30276474-30276888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 322
               

               
Conread position:
               
84-492
               

               
Cow position:
               
chr5:72903445-72903039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
47, 66
               

               
Conread position:
               
85-428
               

               
Cow position:
               
chr5:62142454-62142811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
46, 65
               

               
Conread position:
               
85-451
               

               
Cow position:
               
chr5:61576323-61576701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
46, 65
               

               
Conread position:
               
86-286
               

               
Cow position:
               
chr5:50975670-50975883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
86-292
               

               
Cow position:
               
chr5:21964070-21964278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
9, 18
               

               
Conread position:
               
86-387
               

               
Cow position:
               
chr5:52645291-52644984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
200, 52
               

               
Conread position:
               
86-423
               

               
Cow position:
               
chr5:19813425-19813091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
174, 11
               

               
Conread position:
               
86-423
               

               
Cow position:
               
chr5:45803845-45804189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 151
               

               
Conread position:
               
86-479
               

               
Cow position:
               
chr5:55756655-55756225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
41, 337
               

               
Conread position:
               
86-490
               

               
Cow position:
               
chr5:32394386-32394801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
50, 10
               

               
Conread position:
               
86-492
               

               
Cow position:
               
chr5:11668395-11667983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
9, 66
               

               
Conread position:
               
87-387
               

               
Cow position:
               
chr5:51151576-51151258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
48, 10
               

               
Conread position:
               
87-404
               

               
Cow position:
               
chr5:3204621-3204942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
122, 62
               

               
Conread position:
               
87-492
               

               
Cow position:
               
chr5:47601602-47602009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 316
               

               
Conread position:
               
88-217
               

               
Cow position:
               
chr5:19969245-19969113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
88-227
               

               
Cow position:
               
chr5:25935737-25935877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
46, 29
               

               
Conread position:
               
88-240
               

               
Cow position:
               
chr5:14630121-14629965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
44, 15
               

               
Conread position:
               
88-241
               

               
Cow position:
               
chr5:61455541-61455698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
88-251
               

               
Cow position:
               
chr5:6033025-6033189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
88-259
               

               
Cow position:
               
chr5:15462501-15462672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
47, 31
               

               
Conread position:
               
88-262
               

               
Cow position:
               
chr5:37366684-37366861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
88-275
               

               
Cow position:
               
chr5:12672240-12672057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
45, 67
               

               
Conread position:
               
88-275
               

               
Cow position:
               
chr5:63388581-63388767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 139
               

               
Conread position:
               
88-282
               

               
Cow position:
               
chr5:34506139-34505949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
43, 62
               

               
Conread position:
               
88-286
               

               
Cow position:
               
chr5:5848400-5848205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
47, 63
               

               
Conread position:
               
88-286
               

               
Cow position:
               
chr5:54530769-54530961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
42, 140
               

               
Conread position:
               
88-287
               

               
Cow position:
               
chr5:26377880-26377684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
47, 63
               

               
Conread position:
               
88-290
               

               
Cow position:
               
chr5:28324132-28324343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
88-292
               

               
Cow position:
               
chr5:14420558-14420353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
43, 153
               

               
Conread position:
               
88-292
               

               
Cow position:
               
chr5:29771301-29771506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
47, 137
               

               
Conread position:
               
88-292
               

               
Cow position:
               
chr5:35235922-35235719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
47, 87
               

               
Conread position:
               
88-292
               

               
Cow position:
               
chr5:43858641-43858445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
88-292
               

               
Cow position:
               
chr5:49362204-49362001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
47, 28
               

               
Conread position:
               
88-292
               

               
Cow position:
               
chr5:50950340-50950544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
47, 70
               

               
Conread position:
               
88-293
               

               
Cow position:
               
chr5:10789891-10789686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
48, 145
               

               
Conread position:
               
88-295
               

               
Cow position:
               
chr5:55942611-55942404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
51, 91
               

               
Conread position:
               
88-296
               

               
Cow position:
               
chr5:22934669-22934458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
48, 8
               

               
Conread position:
               
88-296
               

               
Cow position:
               
chr5:26505619-26505406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
88-296
               

               
Cow position:
               
chr5:37714118-37713903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
50, 155
               

               
Conread position:
               
88-296
               

               
Cow position:
               
chr5:48757731-48757931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
47, 131
               

               
Conread position:
               
88-297
               

               
Cow position:
               
chr5:16184876-16185082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
47, 63
               

               
Conread position:
               
88-297
               

               
Cow position:
               
chr5:45226037-45225829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
123, 61
               

               
Conread position:
               
88-299
               

               
Cow position:
               
chr5:34922048-34921840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
50, 66
               

               
Conread position:
               
88-300
               

               
Cow position:
               
chr5:6986945-6987161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 131
               

               
Conread position:
               
88-300
               

               
Cow position:
               
chr5:27690272-27690059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
47, 89
               

               
Conread position:
               
88-300
               

               
Cow position:
               
chr5:33467254-33467044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
150, 50
               

               
Conread position:
               
88-307
               

               
Cow position:
               
chr5:34115449-34115655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
43, 63
               

               
Conread position:
               
88-307
               

               
Cow position:
               
chr5:56820473-56820258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
88-307
               

               
Cow position:
               
chr5:61488324-61488104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
43, 8
               

               
Conread position:
               
88-307
               

               
Cow position:
               
chr5:65924912-65924687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
63, 217
               

               
Conread position:
               
88-309
               

               
Cow position:
               
chr5:61030442-61030219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
47, 75
               

               
Conread position:
               
88-314
               

               
Cow position:
               
chr5:15426315-15426539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
47, 15
               

               
Conread position:
               
88-314
               

               
Cow position:
               
chr5:73252883-73253102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
47, 63
               

               
Conread position:
               
88-317
               

               
Cow position:
               
chr5:40595215-40594990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
47, 63
               

               
Conread position:
               
88-323
               

               
Cow position:
               
chr5:694374-694607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
47, 8
               

               
Conread position:
               
88-324
               

               
Cow position:
               
chr5:49820929-49821173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
43, 54
               

               
Conread position:
               
88-329
               

               
Cow position:
               
chr5:72310501-72310741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
46, 63
               

               
Conread position:
               
88-330
               

               
Cow position:
               
chr5:51490967-51490725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
47, 36
               

               
Conread position:
               
88-333
               

               
Cow position:
               
chr5:55145576-55145326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
48, 143
               

               
Conread position:
               
88-337
               

               
Cow position:
               
chr5:70050539-70050788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
47, 73
               

               
Conread position:
               
88-340
               

               
Cow position:
               
chr5:6086775-6086511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
88-343
               

               
Cow position:
               
chr5:54064566-54064820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
47, 73
               

               
Conread position:
               
88-356
               

               
Cow position:
               
chr5:43474634-43474910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
47, 63
               

               
Conread position:
               
88-363
               

               
Cow position:
               
chr5:28456625-28456333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
88-363
               

               
Cow position:
               
chr5:28459927-28459634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
88-363
               

               
Cow position:
               
chr5:30816502-30816777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
47, 114
               

               
Conread position:
               
88-373
               

               
Cow position:
               
chr5:66297025-66297295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
47, 105
               

               
Conread position:
               
88-374
               

               
Cow position:
               
chr5:34638672-34638967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 58
               

               
Conread position:
               
88-380
               

               
Cow position:
               
chr5:72172810-72173116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
50, 67
               

               
Conread position:
               
88-381
               

               
Cow position:
               
chr5:68604646-68604943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
48, 8
               

               
Conread position:
               
88-383
               

               
Cow position:
               
chr5:43437130-43436821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
88-386
               

               
Cow position:
               
chr5:27411603-27411306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
199, 25
               

               
Conread position:
               
88-387
               

               
Cow position:
               
chr5:32697026-32696727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 64
               

               
Conread position:
               
88-393
               

               
Cow position:
               
chr5:16508883-16509209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
61, 8
               

               
Conread position:
               
88-393
               

               
Cow position:
               
chr5:66815789-66815471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
43, 98
               

               
Conread position:
               
88-405
               

               
Cow position:
               
chr5:54111705-54112025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
46, 98
               

               
Conread position:
               
88-411
               

               
Cow position:
               
chr5:67212165-67212479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
45, 150
               

               
Conread position:
               
88-418
               

               
Cow position:
               
chr5:15598447-15598113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 104
               

               
Conread position:
               
88-428
               

               
Cow position:
               
chr5:4218664-4218992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
43, 62
               

               
Conread position:
               
88-428
               

               
Cow position:
               
chr5:60715568-60715233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
43, 63
               

               
Conread position:
               
88-430
               

               
Cow position:
               
chr5:27306105-27306441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
43, 95
               

               
Conread position:
               
88-431
               

               
Cow position:
               
chr5:46323025-46322665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
44, 99
               

               
Conread position:
               
88-436
               

               
Cow position:
               
chr5:59326041-59325700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
50, 8
               

               
Conread position:
               
88-443
               

               
Cow position:
               
chr5:21040187-21039833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
48, 73
               

               
Conread position:
               
88-446
               

               
Cow position:
               
chr5:4032202-4031835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
43, 57
               

               
Conread position:
               
88-447
               

               
Cow position:
               
chr5:25231227-25230865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
10, 254
               

               
Conread position:
               
88-449
               

               
Cow position:
               
chr5:37814410-37814783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
52, 63
               

               
Conread position:
               
88-449
               

               
Cow position:
               
chr5:49685494-49685121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
47, 315
               

               
Conread position:
               
88-449
               

               
Cow position:
               
chr5:54311120-54311490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
47, 35
               

               
Conread position:
               
88-450
               

               
Cow position:
               
chr5:16206356-16205998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
97, 29
               

               
Conread position:
               
88-451
               

               
Cow position:
               
chr5:18573957-18574330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
48, 63
               

               
Conread position:
               
88-452
               

               
Cow position:
               
chr5:35145139-35145487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
39, 63
               

               
Conread position:
               
88-467
               

               
Cow position:
               
chr5:34528348-34528721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
48, 62
               

               
Conread position:
               
88-467
               

               
Cow position:
               
chr5:42777551-42777925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
46, 97
               

               
Conread position:
               
88-472
               

               
Cow position:
               
chr5:6683561-6683196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
43, 55
               

               
Conread position:
               
88-477
               

               
Cow position:
               
chr5:66338871-66339255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
47, 15
               

               
Conread position:
               
88-479
               

               
Cow position:
               
chr5:8024405-8024023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
47, 20
               

               
Conread position:
               
88-479
               

               
Cow position:
               
chr5:59873619-59873225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
46, 84
               

               
Conread position:
               
88-479
               

               
Cow position:
               
chr5:62172205-62172590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 63
               

               
Conread position:
               
88-483
               

               
Cow position:
               
chr5:26990180-26990572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
47, 60
               

               
Conread position:
               
88-485
               

               
Cow position:
               
chr5:5111290-5110863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 114
               

               
Conread position:
               
88-485
               

               
Cow position:
               
chr5:21828651-21829061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 91
               

               
Conread position:
               
88-485
               

               
Cow position:
               
chr5:35684721-35685132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 153
               

               
Conread position:
               
88-485
               

               
Cow position:
               
chr5:35763077-35763441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
47, 59
               

               
Conread position:
               
88-485
               

               
Cow position:
               
chr5:57074548-57074138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 99
               

               
Conread position:
               
88-485
               

               
Cow position:
               
chr5:58519612-58519220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
126, 46
               

               
Conread position:
               
88-486
               

               
Cow position:
               
chr5:15722267-15721891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 15
               

               
Conread position:
               
88-488
               

               
Cow position:
               
chr5:25495551-25495153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
48, 56
               

               
Conread position:
               
88-490
               

               
Cow position:
               
chr5:11229887-11229472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 259
               

               
Conread position:
               
88-490
               

               
Cow position:
               
chr5:16893989-16893579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 150
               

               
Conread position:
               
88-490
               

               
Cow position:
               
chr5:19278905-19278504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 55
               

               
Conread position:
               
88-490
               

               
Cow position:
               
chr5:44848230-44847828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
43, 63
               

               
Conread position:
               
88-490
               

               
Cow position:
               
chr5:54350574-54350172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
47, 63
               

               
Conread position:
               
88-490
               

               
Cow position:
               
chr5:56028743-56028346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 8
               

               
Conread position:
               
88-490
               

               
Cow position:
               
chr5:62107708-62107285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
88-490
               

               
Cow position:
               
chr5:65941467-65941051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 177
               

               
Conread position:
               
88-491
               

               
Cow position:
               
chr5:3771633-3772042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
42, 62
               

               
Conread position:
               
88-491
               

               
Cow position:
               
chr5:12323014-12322611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 67
               

               
Conread position:
               
88-491
               

               
Cow position:
               
chr5:65752643-65753060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 67
               

               
Conread position:
               
88-492
               

               
Cow position:
               
chr5:14550799-14550381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
47, 312
               

               
Conread position:
               
88-492
               

               
Cow position:
               
chr5:16025674-16025282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
47, 256
               

               
Conread position:
               
88-492
               

               
Cow position:
               
chr5:16938221-16937833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
47, 60
               

               
Conread position:
               
88-492
               

               
Cow position:
               
chr5:20127841-20128255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
47, 39
               

               
Conread position:
               
88-492
               

               
Cow position:
               
chr5:21617242-21617656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 79
               

               
Conread position:
               
88-492
               

               
Cow position:
               
chr5:22242998-22242573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 22
               

               
Conread position:
               
88-492
               

               
Cow position:
               
chr5:24996437-24996020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 29
               

               
Conread position:
               
88-492
               

               
Cow position:
               
chr5:25035440-25035053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
344, 39
               

               
Conread position:
               
88-492
               

               
Cow position:
               
chr5:26262887-26262484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
62, 47
               

               
Conread position:
               
88-492
               

               
Cow position:
               
chr5:27154809-27155203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 63
               

               
Conread position:
               
88-492
               

               
Cow position:
               
chr5:30302685-30303082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 15
               

               
Conread position:
               
88-492
               

               
Cow position:
               
chr5:37645860-37646276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
47, 98
               

               
Conread position:
               
88-492
               

               
Cow position:
               
chr5:37942006-37941606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
48, 82
               

               
Conread position:
               
88-492
               

               
Cow position:
               
chr5:41164875-41165283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 66
               

               
Conread position:
               
88-492
               

               
Cow position:
               
chr5:47888928-47888527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
48, 183
               

               
Conread position:
               
88-492
               

               
Cow position:
               
chr5:50722837-50723249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
62, 39
               

               
Conread position:
               
88-492
               

               
Cow position:
               
chr5:53835501-53835922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 63
               

               
Conread position:
               
88-492
               

               
Cow position:
               
chr5:55967096-55966672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 360
               

               
Conread position:
               
88-492
               

               
Cow position:
               
chr5:64137038-64137459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
48, 63
               

               
Conread position:
               
88-492
               

               
Cow position:
               
chr5:64176334-64175929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 313
               

               
Conread position:
               
88-492
               

               
Cow position:
               
chr5:64321535-64321962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 141
               

               
Conread position:
               
89-443
               

               
Cow position:
               
chr5:8821224-8820865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
47, 72
               

               
Conread position:
               
89-492
               

               
Cow position:
               
chr5:47756556-47756973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
45, 238
               

               
Conread position:
               
90-208
               

               
Cow position:
               
chr5:62378289-62378410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
90-294
               

               
Cow position:
               
chr5:63185465-63185264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
45, 141
               

               
Conread position:
               
90-296
               

               
Cow position:
               
chr5:1276688-1276470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
90-299
               

               
Cow position:
               
chr5:73222478-73222684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
45, 13
               

               
Conread position:
               
90-396
               

               
Cow position:
               
chr5:46122562-46122248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
48, 62
               

               
Conread position:
               
90-431
               

               
Cow position:
               
chr5:18898772-18899111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
41, 59
               

               
Conread position:
               
90-490
               

               
Cow position:
               
chr5:15363679-15364069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 166
               

               
Conread position:
               
90-490
               

               
Cow position:
               
chr5:26097084-26097489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
41, 60
               

               
Conread position:
               
90-492
               

               
Cow position:
               
chr5:20779593-20779198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
76, 53
               

               
Conread position:
               
91-252
               

               
Cow position:
               
chr5:14703177-14703016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
43, 141
               

               
Conread position:
               
91-255
               

               
Cow position:
               
chr5:66281002-66280838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
44, 58
               

               
Conread position:
               
91-279
               

               
Cow position:
               
chr5:12146484-12146675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
43, 6
               

               
Conread position:
               
91-290
               

               
Cow position:
               
chr5:40039981-40039782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
40, 101
               

               
Conread position:
               
91-290
               

               
Cow position:
               
chr5:58144814-58144613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
44, 64
               

               
Conread position:
               
91-292
               

               
Cow position:
               
chr5:18090517-18090714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
44, 63
               

               
Conread position:
               
91-292
               

               
Cow position:
               
chr5:58460615-58460405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
91-292
               

               
Cow position:
               
chr5:75437107-75436897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
91-296
               

               
Cow position:
               
chr5:45940816-45940620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
91-300
               

               
Cow position:
               
chr5:1766554-1766351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
44, 60
               

               
Conread position:
               
91-306
               

               
Cow position:
               
chr5:41531297-41531078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
44, 6
               

               
Conread position:
               
91-307
               

               
Cow position:
               
chr5:9859929-9859709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
43, 154
               

               
Conread position:
               
91-330
               

               
Cow position:
               
chr5:43395348-43395110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
126, 57
               

               
Conread position:
               
91-367
               

               
Cow position:
               
chr5:58229495-58229772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
44, 60
               

               
Conread position:
               
91-383
               

               
Cow position:
               
chr5:47547927-47547631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
91-383
               

               
Cow position:
               
chr5:65933138-65932851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 36
               

               
Conread position:
               
91-386
               

               
Cow position:
               
chr5:15478903-15479221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
46, 58
               

               
Conread position:
               
91-394
               

               
Cow position:
               
chr5:31918444-31918745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
40, 50
               

               
Conread position:
               
91-394
               

               
Cow position:
               
chr5:34184009-34184326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
47, 260
               

               
Conread position:
               
91-416
               

               
Cow position:
               
chr5:41129555-41129865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 59
               

               
Conread position:
               
91-418
               

               
Cow position:
               
chr5:50533593-50533263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
44, 60
               

               
Conread position:
               
91-418
               

               
Cow position:
               
chr5:57736904-57737224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
40, 60
               

               
Conread position:
               
91-418
               

               
Cow position:
               
chr5:63992373-63992047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
41, 60
               

               
Conread position:
               
91-428
               

               
Cow position:
               
chr5:67243715-67244053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
40, 156
               

               
Conread position:
               
91-446
               

               
Cow position:
               
chr5:34300716-34301069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
40, 59
               

               
Conread position:
               
91-449
               

               
Cow position:
               
chr5:34887407-34887039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 6
               

               
Conread position:
               
91-450
               

               
Cow position:
               
chr5:41546104-41545740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
41, 79
               

               
Conread position:
               
91-451
               

               
Cow position:
               
chr5:26094380-26094010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
44, 94
               

               
Conread position:
               
91-451
               

               
Cow position:
               
chr5:46510077-46509710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 92
               

               
Conread position:
               
91-451
               

               
Cow position:
               
chr5:65776596-65776228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
45, 317
               

               
Conread position:
               
91-461
               

               
Cow position:
               
chr5:44054248-44053891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 111
               

               
Conread position:
               
91-462
               

               
Cow position:
               
chr5:37646761-37646377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 108
               

               
Conread position:
               
91-480
               

               
Cow position:
               
chr5:71494606-71495011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
43, 60
               

               
Conread position:
               
91-485
               

               
Cow position:
               
chr5:17999705-17999302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
44, 84
               

               
Conread position:
               
91-485
               

               
Cow position:
               
chr5:28302950-28302557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
43, 64
               

               
Conread position:
               
91-485
               

               
Cow position:
               
chr5:38832910-38833311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 12
               

               
Conread position:
               
91-490
               

               
Cow position:
               
chr5:72895482-72895885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
44, 58
               

               
Conread position:
               
91-492
               

               
Cow position:
               
chr5:12351992-12351612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
91-492
               

               
Cow position:
               
chr5:17087239-17086816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 187
               

               
Conread position:
               
91-492
               

               
Cow position:
               
chr5:39447741-39447324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
44, 60
               

               
Conread position:
               
91-492
               

               
Cow position:
               
chr5:42063992-42064408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
50, 60
               

               
Conread position:
               
91-492
               

               
Cow position:
               
chr5:47871260-47870853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
40, 6
               

               
Conread position:
               
91-492
               

               
Cow position:
               
chr5:48828939-48829356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
36, 6
               

               
Conread position:
               
91-492
               

               
Cow position:
               
chr5:50483072-50482657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
44, 86
               

               
Conread position:
               
91-492
               

               
Cow position:
               
chr5:57327580-57327998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
42, 6
               

               
Conread position:
               
91-492
               

               
Cow position:
               
chr5:57935324-57934919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 322
               

               
Conread position:
               
92-246
               

               
Cow position:
               
chr5:2851104-2851262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
43, 140
               

               
Conread position:
               
92-249
               

               
Cow position:
               
chr5:32087930-32087767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
92-255
               

               
Cow position:
               
chr5:64844327-64844167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
43, 58
               

               
Conread position:
               
92-259
               

               
Cow position:
               
chr5:14415563-14415736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
92-279
               

               
Cow position:
               
chr5:57706707-57706897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
43, 5
               

               
Conread position:
               
92-281
               

               
Cow position:
               
chr5:58005034-58005230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
39, 146
               

               
Conread position:
               
92-289
               

               
Cow position:
               
chr5:44583328-44583141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
39, 59
               

               
Conread position:
               
92-291
               

               
Cow position:
               
chr5:64392946-64393147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
43, 5
               

               
Conread position:
               
92-292
               

               
Cow position:
               
chr5:28927802-28927599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
92-292
               

               
Cow position:
               
chr5:29212739-29212933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
43, 59
               

               
Conread position:
               
92-292
               

               
Cow position:
               
chr5:54405105-54404901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
43, 98
               

               
Conread position:
               
92-294
               

               
Cow position:
               
chr5:60519957-60520155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
43, 59
               

               
Conread position:
               
92-294
               

               
Cow position:
               
chr5:62826963-62826762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
43, 59
               

               
Conread position:
               
92-295
               

               
Cow position:
               
chr5:63566098-63566305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
92-296
               

               
Cow position:
               
chr5:62027156-62026953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
40, 57
               

               
Conread position:
               
92-298
               

               
Cow position:
               
chr5:74858364-74858570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
46, 59
               

               
Conread position:
               
92-299
               

               
Cow position:
               
chr5:21944172-21944394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
92-299
               

               
Cow position:
               
chr5:59298168-59297963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
43, 85
               

               
Conread position:
               
92-299
               

               
Cow position:
               
chr5:59443460-59443256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
40, 11
               

               
Conread position:
               
92-300
               

               
Cow position:
               
chr5:27403453-27403240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
39, 200
               

               
Conread position:
               
92-300
               

               
Cow position:
               
chr5:38683146-38683356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 63
               

               
Conread position:
               
92-307
               

               
Cow position:
               
chr5:42667598-42667385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
37, 92
               

               
Conread position:
               
92-313
               

               
Cow position:
               
chr5:40357079-40356855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
57, 210
               

               
Conread position:
               
92-327
               

               
Cow position:
               
chr5:45036812-45037050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
43, 59
               

               
Conread position:
               
92-333
               

               
Cow position:
               
chr5:34915932-34916173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
40, 59
               

               
Conread position:
               
92-339
               

               
Cow position:
               
chr5:4797520-4797275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
44, 59
               

               
Conread position:
               
92-354
               

               
Cow position:
               
chr5:64823522-64823248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
40, 94
               

               
Conread position:
               
92-369
               

               
Cow position:
               
chr5:13691785-13691489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
92-371
               

               
Cow position:
               
chr5:63964382-63964089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
92-374
               

               
Cow position:
               
chr5:31144985-31144704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
204, 26
               

               
Conread position:
               
92-374
               

               
Cow position:
               
chr5:45170153-45170442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
44, 125
               

               
Conread position:
               
92-377
               

               
Cow position:
               
chr5:50729286-50729567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
39, 76
               

               
Conread position:
               
92-381
               

               
Cow position:
               
chr5:31469792-31469503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
45, 20
               

               
Conread position:
               
92-383
               

               
Cow position:
               
chr5:23140782-23140497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
42, 59
               

               
Conread position:
               
92-383
               

               
Cow position:
               
chr5:32153525-32153227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 92
               

               
Conread position:
               
92-383
               

               
Cow position:
               
chr5:33080996-33080700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
43, 5
               

               
Conread position:
               
92-383
               

               
Cow position:
               
chr5:39094344-39094642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
43, 58
               

               
Conread position:
               
92-383
               

               
Cow position:
               
chr5:74015730-74016032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 61
               

               
Conread position:
               
92-414
               

               
Cow position:
               
chr5:13536947-13537263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
43, 59
               

               
Conread position:
               
92-414
               

               
Cow position:
               
chr5:58793824-58793486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
39, 101
               

               
Conread position:
               
92-417
               

               
Cow position:
               
chr5:33537681-33537998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
43, 59
               

               
Conread position:
               
92-418
               

               
Cow position:
               
chr5:50821579-50821908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 45
               

               
Conread position:
               
92-431
               

               
Cow position:
               
chr5:4710352-4710014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
118, 39
               

               
Conread position:
               
92-431
               

               
Cow position:
               
chr5:72564552-72564902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
43, 99
               

               
Conread position:
               
92-434
               

               
Cow position:
               
chr5:28224245-28224593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
92-442
               

               
Cow position:
               
chr5:29903730-29903375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 5
               

               
Conread position:
               
92-451
               

               
Cow position:
               
chr5:9090233-9089862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
43, 347
               

               
Conread position:
               
92-451
               

               
Cow position:
               
chr5:12709676-12710026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
44, 59
               

               
Conread position:
               
92-451
               

               
Cow position:
               
chr5:21524955-21525315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 250
               

               
Conread position:
               
92-451
               

               
Cow position:
               
chr5:33661645-33662002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
43, 145
               

               
Conread position:
               
92-451
               

               
Cow position:
               
chr5:44994247-44993893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
43, 75
               

               
Conread position:
               
92-451
               

               
Cow position:
               
chr5:58855894-58856260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
43, 59
               

               
Conread position:
               
92-467
               

               
Cow position:
               
chr5:55176677-55177057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
44, 287
               

               
Conread position:
               
92-477
               

               
Cow position:
               
chr5:7193222-7193599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 59
               

               
Conread position:
               
92-477
               

               
Cow position:
               
chr5:66257433-66257820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 31
               

               
Conread position:
               
92-479
               

               
Cow position:
               
chr5:24348902-24349282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 57
               

               
Conread position:
               
92-481
               

               
Cow position:
               
chr5:35826381-35826787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 326
               

               
Conread position:
               
92-481
               

               
Cow position:
               
chr5:66366321-66366699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
43, 59
               

               
Conread position:
               
92-482
               

               
Cow position:
               
chr5:61725760-61726148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
40, 69
               

               
Conread position:
               
92-485
               

               
Cow position:
               
chr5:3491992-3492380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
39, 59
               

               
Conread position:
               
92-485
               

               
Cow position:
               
chr5:11427451-11427039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 310
               

               
Conread position:
               
92-488
               

               
Cow position:
               
chr5:30844901-30845303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 71
               

               
Conread position:
               
92-488
               

               
Cow position:
               
chr5:32975761-32975361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
42, 99
               

               
Conread position:
               
92-490
               

               
Cow position:
               
chr5:22737895-22738296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
7, 110
               

               
Conread position:
               
92-490
               

               
Cow position:
               
chr5:40109292-40109683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 60
               

               
Conread position:
               
92-490
               

               
Cow position:
               
chr5:72045850-72045476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
43, 60
               

               
Conread position:
               
92-492
               

               
Cow position:
               
chr5:1105080-1104676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
39, 204
               

               
Conread position:
               
92-492
               

               
Cow position:
               
chr5:3281622-3282038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
45, 144
               

               
Conread position:
               
92-492
               

               
Cow position:
               
chr5:4507170-4506762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
43, 218
               

               
Conread position:
               
92-492
               

               
Cow position:
               
chr5:5201707-5202104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 66
               

               
Conread position:
               
92-492
               

               
Cow position:
               
chr5:5938115-5938527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
39, 59
               

               
Conread position:
               
92-492
               

               
Cow position:
               
chr5:14314312-14314717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 322
               

               
Conread position:
               
92-492
               

               
Cow position:
               
chr5:26133283-26132894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
43, 59
               

               
Conread position:
               
92-492
               

               
Cow position:
               
chr5:28330541-28330140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
43, 59
               

               
Conread position:
               
92-492
               

               
Cow position:
               
chr5:29827845-29828249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 5
               

               
Conread position:
               
92-492
               

               
Cow position:
               
chr5:30253535-30253941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 37
               

               
Conread position:
               
92-492
               

               
Cow position:
               
chr5:38853150-38853552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
39, 180
               

               
Conread position:
               
92-492
               

               
Cow position:
               
chr5:39936893-39937318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
39, 63
               

               
Conread position:
               
92-492
               

               
Cow position:
               
chr5:40889493-40889094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 58
               

               
Conread position:
               
92-492
               

               
Cow position:
               
chr5:44796928-44796535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
43, 63
               

               
Conread position:
               
92-492
               

               
Cow position:
               
chr5:47704344-47703924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
17, 367
               

               
Conread position:
               
92-492
               

               
Cow position:
               
chr5:48867960-48867546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
7, 46
               

               
Conread position:
               
92-492
               

               
Cow position:
               
chr5:52165392-52164972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 294
               

               
Conread position:
               
92-492
               

               
Cow position:
               
chr5:56070644-56071059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
92-492
               

               
Cow position:
               
chr5:56523964-56524363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 43
               

               
Conread position:
               
92-492
               

               
Cow position:
               
chr5:60210349-60209945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
46, 115
               

               
Conread position:
               
92-492
               

               
Cow position:
               
chr5:61600203-61600608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
44, 283
               

               
Conread position:
               
92-492
               

               
Cow position:
               
chr5:67932671-67932265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
43, 60
               

               
Conread position:
               
93-286
               

               
Cow position:
               
chr5:53855496-53855682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
42, 16
               

               
Conread position:
               
93-293
               

               
Cow position:
               
chr5:17027886-17028084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
43, 100
               

               
Conread position:
               
93-299
               

               
Cow position:
               
chr5:72150043-72150244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
42, 62
               

               
Conread position:
               
93-334
               

               
Cow position:
               
chr5:57271473-57271237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
42, 75
               

               
Conread position:
               
93-367
               

               
Cow position:
               
chr5:20554958-20554678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
43, 124
               

               
Conread position:
               
93-376
               

               
Cow position:
               
chr5:47313265-47313558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
41, 59
               

               
Conread position:
               
93-383
               

               
Cow position:
               
chr5:34049900-34050210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
6, 93
               

               
Conread position:
               
93-431
               

               
Cow position:
               
chr5:6045079-6045434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 323
               

               
Conread position:
               
93-451
               

               
Cow position:
               
chr5:17063302-17062925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
42, 317
               

               
Conread position:
               
93-451
               

               
Cow position:
               
chr5:18702421-18702067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
42, 164
               

               
Conread position:
               
93-452
               

               
Cow position:
               
chr5:44752519-44752148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
38, 57
               

               
Conread position:
               
93-485
               

               
Cow position:
               
chr5:64139354-64139751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 298
               

               
Conread position:
               
93-492
               

               
Cow position:
               
chr5:59137-58729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
42, 58
               

               
Conread position:
               
93-492
               

               
Cow position:
               
chr5:4280255-4280645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
42, 58
               

               
Conread position:
               
93-492
               

               
Cow position:
               
chr5:35208053-35208464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
42, 125
               

               
Conread position:
               
93-492
               

               
Cow position:
               
chr5:74643870-74643483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 61
               

               
Conread position:
               
96-290
               

               
Cow position:
               
chr5:29353335-29353146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
53, 90
               

               
Conread position:
               
96-292
               

               
Cow position:
               
chr5:52000013-52000212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
96-293
               

               
Cow position:
               
chr5:41303296-41303098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
35, 101
               

               
Conread position:
               
96-295
               

               
Cow position:
               
chr5:51357709-51357508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
38, 195
               

               
Conread position:
               
96-296
               

               
Cow position:
               
chr5:8994771-8994573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
96-299
               

               
Cow position:
               
chr5:34288675-34288474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
39, 58
               

               
Conread position:
               
96-383
               

               
Cow position:
               
chr5:45705842-45706126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
40, 55
               

               
Conread position:
               
96-383
               

               
Cow position:
               
chr5:65601255-65601549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
96-395
               

               
Cow position:
               
chr5:56467495-56467794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
36, 59
               

               
Conread position:
               
96-427
               

               
Cow position:
               
chr5:31640222-31640557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
39, 121
               

               
Conread position:
               
96-431
               

               
Cow position:
               
chr5:71454800-71454474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
39, 53
               

               
Conread position:
               
96-451
               

               
Cow position:
               
chr5:44049497-44049854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
38, 53
               

               
Conread position:
               
96-472
               

               
Cow position:
               
chr5:43929939-43929558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 54
               

               
Conread position:
               
96-475
               

               
Cow position:
               
chr5:9894331-9893940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 43
               

               
Conread position:
               
96-489
               

               
Cow position:
               
chr5:2309769-2309360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
39, 177
               

               
Conread position:
               
96-491
               

               
Cow position:
               
chr5:51053853-51053448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 55
               

               
Conread position:
               
96-492
               

               
Cow position:
               
chr5:45845901-45845489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 164
               

               
Conread position:
               
97-247
               

               
Cow position:
               
chr5:24837150-24837001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
38, 54
               

               
Conread position:
               
97-367
               

               
Cow position:
               
chr5:35449049-35449312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
30, 54
               

               
Conread position:
               
97-490
               

               
Cow position:
               
chr5:7044915-7044507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 17
               

               
Conread position:
               
98-202
               

               
Cow position:
               
chr5:60015716-60015823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
98-292
               

               
Cow position:
               
chr5:56433595-56433794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
98-294
               

               
Cow position:
               
chr5:19470390-19470198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
37, 143
               

               
Conread position:
               
98-296
               

               
Cow position:
               
chr5:3242677-3242481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
37, 57
               

               
Conread position:
               
98-380
               

               
Cow position:
               
chr5:35209680-35209386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
40, 81
               

               
Conread position:
               
98-392
               

               
Cow position:
               
chr5:32140910-32140608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
194, 51
               

               
Conread position:
               
98-428
               

               
Cow position:
               
chr5:20783421-20783757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
37, 53
               

               
Conread position:
               
98-449
               

               
Cow position:
               
chr5:458278-458648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
38, 57
               

               
Conread position:
               
98-458
               

               
Cow position:
               
chr5:23169022-23168661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 53
               

               
Conread position:
               
99-492
               

               
Cow position:
               
chr5:50599854-50600247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 24
               

               
Conread position:
               
101-246
               

               
Cow position:
               
chr5:3281071-3280927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 5
               

               
Conread position:
               
101-324
               

               
Cow position:
               
chr5:7763871-7764107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
101-492
               

               
Cow position:
               
chr5:50943354-50942961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 203
               

               
Conread position:
               
103-263
               

               
Cow position:
               
chr5:63917609-63917449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
32, 82
               

               
Conread position:
               
103-292
               

               
Cow position:
               
chr5:9390337-9390535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
103-298
               

               
Cow position:
               
chr5:1027890-1027693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
32, 42
               

               
Conread position:
               
103-383
               

               
Cow position:
               
chr5:45409127-45409415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 53
               

               
Conread position:
               
103-387
               

               
Cow position:
               
chr5:56518408-56518126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
32, 48
               

               
Conread position:
               
103-387
               

               
Cow position:
               
chr5:65588509-65588795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
28, 52
               

               
Conread position:
               
103-423
               

               
Cow position:
               
chr5:57575567-57575903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
31, 303
               

               
Conread position:
               
103-451
               

               
Cow position:
               
chr5:4166473-4166800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
31, 47
               

               
Conread position:
               
103-451
               

               
Cow position:
               
chr5:26370500-26370840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
33, 24
               

               
Conread position:
               
103-481
               

               
Cow position:
               
chr5:55232982-55232629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
188, 29
               

               
Conread position:
               
103-491
               

               
Cow position:
               
chr5:33414606-33414208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
87, 47
               

               
Conread position:
               
103-492
               

               
Cow position:
               
chr5:6839277-6838877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
32, 187
               

               
Conread position:
               
104-288
               

               
Cow position:
               
chr5:49558970-49559153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
31, 53
               

               
Conread position:
               
104-307
               

               
Cow position:
               
chr5:24485623-24485432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
28, 47
               

               
Conread position:
               
106-297
               

               
Cow position:
               
chr5:41522991-41522807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
29, 69
               

               
Conread position:
               
106-371
               

               
Cow position:
               
chr5:28926383-28926100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
106-415
               

               
Cow position:
               
chr5:61839991-61840314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
29, 49
               

               
Conread position:
               
106-492
               

               
Cow position:
               
chr5:34561813-34562210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 297
               

               
Conread position:
               
106-492
               

               
Cow position:
               
chr5:44447082-44446674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 323
               

               
Conread position:
               
106-492
               

               
Cow position:
               
chr5:63647670-63647276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
21, 87
               

               
Conread position:
               
107-353
               

               
Cow position:
               
chr5:1678204-1678454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
7, 49
               

               
Conread position:
               
107-452
               

               
Cow position:
               
chr5:64758958-64758612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
28, 37
               

               
Conread position:
               
107-492
               

               
Cow position:
               
chr5:30487050-30487428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
106, 38
               

               
Conread position:
               
108-337
               

               
Cow position:
               
chr5:27015495-27015726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
41, 20
               

               
Conread position:
               
108-409
               

               
Cow position:
               
chr5:43457712-43457416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
27, 59
               

               
Conread position:
               
108-431
               

               
Cow position:
               
chr5:22643411-22643094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
27, 42
               

               
Conread position:
               
108-446
               

               
Cow position:
               
chr5:50215752-50215413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
43, 297
               

               
Conread position:
               
108-450
               

               
Cow position:
               
chr5:37190292-37189942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
23, 89
               

               
Conread position:
               
108-451
               

               
Cow position:
               
chr5:22565450-22565775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
27, 41
               

               
Conread position:
               
109-264
               

               
Cow position:
               
chr5:50870349-50870508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
109-380
               

               
Cow position:
               
chr5:74003820-74003546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
23, 42
               

               
Conread position:
               
110-491
               

               
Cow position:
               
chr5:59082387-59081992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
25, 108
               

               
Conread position:
               
111-295
               

               
Cow position:
               
chr5:29680888-29681074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
25, 36
               

               
Conread position:
               
111-432
               

               
Cow position:
               
chr5:4220790-4221117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
25, 223
               

               
Conread position:
               
111-492
               

               
Cow position:
               
chr5:4322220-4322614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 106
               

               
Conread position:
               
112-369
               

               
Cow position:
               
chr5:66403954-66404211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
23, 39
               

               
Conread position:
               
112-383
               

               
Cow position:
               
chr5:57591501-57591780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
23, 128
               

               
Conread position:
               
112-395
               

               
Cow position:
               
chr5:7755742-7755465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 39
               

               
Conread position:
               
112-418
               

               
Cow position:
               
chr5:48010036-48009734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 39
               

               
Conread position:
               
112-492
               

               
Cow position:
               
chr5:52040509-52040120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
24, 61
               

               
Conread position:
               
115-292
               

               
Cow position:
               
chr5:17644842-17644665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 36
               

               
Conread position:
               
116-492
               

               
Cow position:
               
chr5:52667844-52668240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
35, 14
               

               
Conread position:
               
117-363
               

               
Cow position:
               
chr5:6670382-6670121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
18, 135
               

               
Conread position:
               
117-485
               

               
Cow position:
               
chr5:46512951-46512572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 266
               

               
Conread position:
               
119-271
               

               
Cow position:
               
chr5:57576031-57576185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
119-483
               

               
Cow position:
               
chr5:17768326-17767960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 31
               

               
Conread position:
               
120-488
               

               
Cow position:
               
chr5:41010177-41009813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
29, 128
               

               
Conread position:
               
122-490
               

               
Cow position:
               
chr5:59631301-59631686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
7, 116
               

               
Conread position:
               
123-485
               

               
Cow position:
               
chr5:44028480-44028111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
123-490
               

               
Cow position:
               
chr5:65136105-65136458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
9, 29
               

               
Conread position:
               
124-481
               

               
Cow position:
               
chr5:6286604-6286259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 48
               

               
Conread position:
               
126-488
               

               
Cow position:
               
chr5:3627331-3626984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
23, 177
               

               
Conread position:
               
126-492
               

               
Cow position:
               
chr5:56014560-56014923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
170, 21
               

               
Conread position:
               
127-442
               

               
Cow position:
               
chr5:62638731-62639052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
7, 22
               

               
Conread position:
               
127-485
               

               
Cow position:
               
chr5:45472091-45472473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
5, 55
               

               
Conread position:
               
127-492
               

               
Cow position:
               
chr5:39333716-39333328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
9, 271
               

               
Conread position:
               
130-277
               

               
Cow position:
               
chr5:42705094-42705238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
81, 24
               

               
Conread position:
               
130-307
               

               
Cow position:
               
chr5:41452837-41452663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 61
               

               
Conread position:
               
131-490
               

               
Cow position:
               
chr5:74580623-74580986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
19, 110
               

               
Conread position:
               
132-450
               

               
Cow position:
               
chr5:30950088-30949760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
19, 135
               

               
Conread position:
               
133-393
               

               
Cow position:
               
chr5:69520723-69520993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
16, 36
               

               
Conread position:
               
133-452
               

               
Cow position:
               
chr5:56317127-56317454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
16, 109
               

               
Conread position:
               
133-479
               

               
Cow position:
               
chr5:30092797-30092437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
133-492
               

               
Cow position:
               
chr5:44028913-44028551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
19, 107
               

               
Conread position:
               
134-492
               

               
Cow position:
               
chr5:30629324-30628952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 16
               

               
Conread position:
               
135-490
               

               
Cow position:
               
chr5:65967897-65967534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
14, 272
               

               
Conread position:
               
135-492
               

               
Cow position:
               
chr5:55955740-55956111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 76
               

               
Conread position:
               
136-431
               

               
Cow position:
               
chr5:14629980-14629667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
13, 23
               

               
Conread position:
               
140-386
               

               
Cow position:
               
chr5:65883938-65883677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
74, 147
               

               
Conread position:
               
146-382
               

               
Cow position:
               
chr5:33552566-33552332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
6, 55
               

               
Conread position:
               
148-467
               

               
Cow position:
               
chr5:66972273-66972609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
73, 253
               

               
Conread position:
               
150-492
               

               
Cow position:
               
chr5:42050399-42050745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
140, 113
               

               
Conread position:
               
151-491
               

               
Cow position:
               
chr5:66581812-66582170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
63, 249
               

               
Conread position:
               
152-492
               

               
Cow position:
               
chr5:12761266-12760919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
51, 254
               

               
Conread position:
               
153-492
               

               
Cow position:
               
chr5:7057549-7057196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
40, 9
               

               
Conread position:
               
155-417
               

               
Cow position:
               
chr5:72951692-72951968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
49, 258
               

               
Conread position:
               
157-300
               

               
Cow position:
               
chr5:71579028-71579174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
157-383
               

               
Cow position:
               
chr5:46425996-46425763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
157-387
               

               
Cow position:
               
chr5:63865650-63865891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
141, 205
               

               
Conread position:
               
157-434
               

               
Cow position:
               
chr5:20422324-20422052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
134, 29
               

               
Conread position:
               
157-481
               

               
Cow position:
               
chr5:70952021-70951704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 205
               

               
Conread position:
               
157-488
               

               
Cow position:
               
chr5:56877343-56877667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
131, 68
               

               
Conread position:
               
157-490
               

               
Cow position:
               
chr5:35247256-35246909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
7, 85
               

               
Conread position:
               
157-490
               

               
Cow position:
               
chr5:68718732-68719066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
140, 27
               

               
Conread position:
               
157-492
               

               
Cow position:
               
chr5:12673605-12673279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
132, 30
               

               
Conread position:
               
157-492
               

               
Cow position:
               
chr5:54750691-54751009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
64, 107
               

               
Conread position:
               
158-492
               

               
Cow position:
               
chr5:45397434-45397768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
115, 105
               

               
Conread position:
               
159-492
               

               
Cow position:
               
chr5:55259284-55259609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
205, 55
               

               
Conread position:
               
160-490
               

               
Cow position:
               
chr5:19335932-19335578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
161-489
               

               
Cow position:
               
chr5:3582434-3582753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
138, 41
               

               
Conread position:
               
161-492
               

               
Cow position:
               
chr5:64027149-64026814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 236
               

               
Conread position:
               
162-481
               

               
Cow position:
               
chr5:57101916-57101602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
42, 201
               

               
Conread position:
               
165-470
               

               
Cow position:
               
chr5:73168135-73167835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
58, 22
               

               
Conread position:
               
166-293
               

               
Cow position:
               
chr5:19294622-19294498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
166-336
               

               
Cow position:
               
chr5:7921536-7921359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
167-330
               

               
Cow position:
               
chr5:38647224-38647394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
123, 16
               

               
Conread position:
               
168-492
               

               
Cow position:
               
chr5:991332-991675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
169-490
               

               
Cow position:
               
chr5:22666960-22667269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
272, 84
               

               
Conread position:
               
170-442
               

               
Cow position:
               
chr5:54768042-54767762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
42, 225
               

               
Conread position:
               
172-451
               

               
Cow position:
               
chr5:19523768-19524056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
44, 12
               

               
Conread position:
               
182-451
               

               
Cow position:
               
chr5:44726446-44726175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
104, 204
               

               
Conread position:
               
183-423
               

               
Cow position:
               
chr5:49440991-49440741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
106, 72
               

               
Conread position:
               
185-492
               

               
Cow position:
               
chr5:33560851-33560537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
32, 214
               

               
Conread position:
               
188-418
               

               
Cow position:
               
chr5:27172094-27171868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
127, 21
               

               
Conread position:
               
188-492
               

               
Cow position:
               
chr5:12901801-12902120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
29, 213
               

               
Conread position:
               
189-451
               

               
Cow position:
               
chr5:60599298-60599045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
22, 37
               

               
Conread position:
               
190-451
               

               
Cow position:
               
chr5:7697893-7698156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
108, 213
               

               
Conread position:
               
190-451
               

               
Cow position:
               
chr5:58446691-58446964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
76, 221
               

               
Conread position:
               
190-492
               

               
Cow position:
               
chr5:42670968-42670672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
99, 45
               

               
Conread position:
               
192-475
               

               
Cow position:
               
chr5:60183691-60183984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
100, 212
               

               
Conread position:
               
193-492
               

               
Cow position:
               
chr5:14921039-14920725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
96, 73
               

               
Conread position:
               
194-436
               

               
Cow position:
               
chr5:73418391-73418148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
14, 32
               

               
Conread position:
               
195-386
               

               
Cow position:
               
chr5:56635793-56635990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
22, 72
               

               
Conread position:
               
196-451
               

               
Cow position:
               
chr5:41293974-41294238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
21, 150
               

               
Conread position:
               
196-492
               

               
Cow position:
               
chr5:31475575-31475885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
198-492
               

               
Cow position:
               
chr5:36039108-36038804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
92, 50
               

               
Conread position:
               
199-432
               

               
Cow position:
               
chr5:54375610-54375363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
96, 214
               

               
Conread position:
               
203-492
               

               
Cow position:
               
chr5:17555127-17554834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
94, 15
               

               
Conread position:
               
204-455
               

               
Cow position:
               
chr5:62378693-62378938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
85, 155
               

               
Conread position:
               
204-492
               

               
Cow position:
               
chr5:56548480-56548767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
52, 153
               

               
Conread position:
               
205-490
               

               
Cow position:
               
chr5:30232802-30233109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
40, 263
               

               
Conread position:
               
205-492
               

               
Cow position:
               
chr5:33833948-33834241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
86, 10
               

               
Conread position:
               
212-492
               

               
Cow position:
               
chr5:43402810-43403110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
75, 200
               

               
Conread position:
               
215-490
               

               
Cow position:
               
chr5:41884849-41885113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
47, 84
               

               
Conread position:
               
215-492
               

               
Cow position:
               
chr5:57527005-57526726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
94, 181
               

               
Conread position:
               
222-492
               

               
Cow position:
               
chr5:61914490-61914772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
82, 180
               

               
Conread position:
               
225-431
               

               
Cow position:
               
chr5:69636158-69636362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
172, 0
               

               
Conread position:
               
230-490
               

               
Cow position:
               
chr5:6439105-6438826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
49, 172
               

               
Conread position:
               
231-492
               

               
Cow position:
               
chr5:63234897-63234622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
55, 173
               

               
Conread position:
               
240-492
               

               
Cow position:
               
chr5:59627036-59626771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
56, 164
               

               
Conread position:
               
241-451
               

               
Cow position:
               
chr5:45420195-45419979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
53, 163
               

               
Conread position:
               
256-451
               

               
Cow position:
               
chr5:56339066-56338863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
34, 153
               

               
Conread position:
               
261-482
               

               
Cow position:
               
chr5:17602242-17602014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
36, 94
               

               
Conread position:
               
262-441
               

               
Cow position:
               
chr5:45126622-45126800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
150, 136
               

               
Conread position:
               
262-492
               

               
Cow position:
               
chr5:31052345-31052589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 184
               

               
Conread position:
               
280-481
               

               
Cow position:
               
chr5:5017363-5017563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 31
               

               
Conread position:
               
282-485
               

               
Cow position:
               
chr5:72006499-72006301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
285-492
               

               
Cow position:
               
chr5:26549145-26548942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
141, 8
               

               
Conread position:
               
285-492
               

               
Cow position:
               
chr5:50824587-50824784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
286-490
               

               
Cow position:
               
chr5:12434537-12434734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 112
               

               
Conread position:
               
286-492
               

               
Cow position:
               
chr5:60515033-60514825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
128, 94
               

               
Conread position:
               
286-492
               

               
Cow position:
               
chr5:69099715-69099920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
161, 104
               

               
Conread position:
               
287-436
               

               
Cow position:
               
chr5:35982742-35982594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
83, 103
               

               
Conread position:
               
287-442
               

               
Cow position:
               
chr5:9233993-9233841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
125, 110
               

               
Conread position:
               
287-481
               

               
Cow position:
               
chr5:22795211-22795397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
10, 70
               

               
Conread position:
               
287-488
               

               
Cow position:
               
chr5:50101380-50101181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
72, 112
               

               
Conread position:
               
287-490
               

               
Cow position:
               
chr5:55795971-55795771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 111
               

               
Conread position:
               
287-492
               

               
Cow position:
               
chr5:46541059-46540859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
54, 71
               

               
Conread position:
               
287-492
               

               
Cow position:
               
chr5:51298717-51298514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
14, 71
               

               
Conread position:
               
287-492
               

               
Cow position:
               
chr5:52852967-52853168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
287-492
               

               
Cow position:
               
chr5:57686741-57686540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
287-492
               

               
Cow position:
               
chr5:60523729-60523928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
28, 71
               

               
Conread position:
               
287-492
               

               
Cow position:
               
chr5:69383251-69383452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
287-492
               

               
Cow position:
               
chr5:74040007-74039805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
151, 109
               

               
Conread position:
               
288-490
               

               
Cow position:
               
chr5:73253408-73253604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
288-492
               

               
Cow position:
               
chr5:20288266-20288057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
137, 108
               

               
Conread position:
               
289-479
               

               
Cow position:
               
chr5:34915055-34914867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
140, 94
               

               
Conread position:
               
289-490
               

               
Cow position:
               
chr5:17104851-17105044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
289-492
               

               
Cow position:
               
chr5:39035778-39035983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
143, 108
               

               
Conread position:
               
291-479
               

               
Cow position:
               
chr5:49501824-49501630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
138, 105
               

               
Conread position:
               
299-492
               

               
Cow position:
               
chr5:2240981-2240788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
134, 41
               

               
Conread position:
               
302-492
               

               
Cow position:
               
chr5:46704288-46704099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
145, 88
               

               
Conread position:
               
302-492
               

               
Cow position:
               
chr5:55942368-55942176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
127, 95
               

               
Conread position:
               
303-485
               

               
Cow position:
               
chr5:38168906-38169087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
303-492
               

               
Cow position:
               
chr5:60948145-60948333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
130, 54
               

               
Conread position:
               
304-485
               

               
Cow position:
               
chr5:51247118-51246938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
124, 76
               

               
Conread position:
               
306-491
               

               
Cow position:
               
chr5:26147606-26147790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
112, 91
               

               
Conread position:
               
315-490
               

               
Cow position:
               
chr5:35190134-35190305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
319-492
               

               
Cow position:
               
chr5:1694060-1693891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
320-492
               

               
Cow position:
               
chr5:16668726-16668894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
320-492
               

               
Cow position:
               
chr5:34288221-34288053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
107, 36
               

               
Conread position:
               
322-490
               

               
Cow position:
               
chr5:8736248-8736078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
107, 45
               

               
Conread position:
               
345-492
               

               
Cow position:
               
chr5:29599492-29599351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               
Show alignments to all cow chromosomes.